Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1207100 Malus domestica HOM05D001546 ORTHO05D008648 2.2e-48 195.3 96 100.0
MD07G1119400 Malus domestica HOM05D001546 ORTHO05D008648 5.0e-45 184.1 94 95.7
RcHm_v2.0_Chr1g0349941 Rosa chinensis HOM05D001546 ORTHO05D008648 5.4e-39 164.1 94 85.1
Prupe.2G143400 Prunus persica HOM05D001546 ORTHO05D008648 2.0e-38 162.2 106 77.4
FvH4_7g11500 Fragaria vesca HOM05D001546 ORTHO05D008648 5.9e-38 160.6 94 83.0
FAN10G0703 Fragaria x ananassa HOM05D001546 ORTHO05D002908 5.9e-38 160.6 94 83.0
FAN10G0988 Fragaria x ananassa HOM05D001546 ORTHO05D002908 5.9e-38 160.6 94 83.0
FAN03G2056 Fragaria x ananassa HOM05D001546 ORTHO05D008648 7.8e-38 160.2 94 81.9
FAN06G1243 Fragaria x ananassa HOM05D001546 ORTHO05D002908 1.0e-37 159.8 93 83.9
FAN06G5055 Fragaria x ananassa HOM05D001546 ORTHO05D002908 1.0e-37 159.8 93 83.9
Dinv43692 Davidia involucrata HOM05D001546 ORTHO05D008648 3.6e-35 151.4 94 76.6
TPR.G31325 Trifolium pratense HOM05D001546 ORTHO05D008648 6.1e-35 150.6 96 74.0
CSS0003206 Camellia sinensis var. sinensis HOM05D001546 ORTHO05D008648 8.0e-35 150.2 94 74.5
CSS0048837 Camellia sinensis var. sinensis HOM05D001546 ORTHO05D008648 8.0e-35 150.2 94 74.5
CANSAT56G2954 Cannabis sativa HOM05D001546 ORTHO05D008648 8.0e-35 150.2 94 77.7
CANSAT56G4308 Cannabis sativa HOM05D001546 ORTHO05D008648 1.4e-34 149.4 94 77.7
TWI14G0061 Tripterygium wilfordii HOM05D001546 ORTHO05D008648 1.4e-34 149.4 94 75.5
QL08p052789 Quercus lobata HOM05D001546 ORTHO05D008648 1.8e-34 149.1 94 75.5
Rhsim07G0028900 Rhododendron simsii HOM05D001546 ORTHO05D008648 1.8e-34 149.1 94 75.5
Medtr4g111780 Medicago truncatula HOM05D001546 ORTHO05D008648 2.3e-34 148.7 96 72.9
Glyma.03G027600 Glycine max HOM05D001546 ORTHO05D008648 3.1e-34 148.3 94 73.4
Lj7A531T53 Lonicera japonica HOM05D001546 ORTHO05D008648 4.0e-34 147.9 94 73.4
Manes.11G109100 Manihot esculenta HOM05D001546 ORTHO05D008648 4.0e-34 147.9 94 74.5
CiPaw.01G263600 Carya illinoinensis HOM05D001546 ORTHO05D008648 5.2e-34 147.5 94 74.5
Medtr4g024850 Medicago truncatula HOM05D001546 ORTHO05D008648 5.2e-34 147.5 96 71.9
Cpa.g.sc18.103 Carica papaya HOM05D001546 ORTHO05D008648 8.9e-34 146.7 94 72.3
Sed0028009 Sechium edule HOM05D001546 ORTHO05D008648 8.9e-34 146.7 94 74.5
GSVIVG01027665001 Vitis vinifera HOM05D001546 ORTHO05D008648 8.9e-34 146.7 94 74.5
TAR375G0905 Trochodendron aralioides HOM05D001546 ORTHO05D008648 1.2e-33 146.4 94 74.5
ClCG05G002360 Citrullus lanatus HOM05D001546 ORTHO05D008648 1.5e-33 146.0 94 73.4
Migut.B01619 Erythranthe guttata HOM05D001546 ORTHO05D008648 2.6e-33 145.2 94 73.4
Eucgr.I00435 Eucalyptus grandis HOM05D001546 ORTHO05D008648 2.6e-33 145.2 94 73.4
Hma1.2p1_0044F.1_g026120 Hydrangea macrophylla HOM05D001546 ORTHO05D008648 2.6e-33 145.2 93 71.0
MSTRG.20739 Avicennia marina HOM05D001546 ORTHO05D008648 3.4e-33 144.8 94 72.3
Lj3g0018034 Lotus japonicus HOM05D001546 ORTHO05D008648 3.4e-33 144.8 94 71.3
Atru.chr5.288 Acer truncatum HOM05D001546 ORTHO05D008648 4.4e-33 144.4 94 72.3
Lsat_1_v5_gn_7_9580 Lactuca sativa HOM05D001546 ORTHO05D008648 4.4e-33 144.4 93 73.1
Psat7g230880 Pisum sativum HOM05D001546 ORTHO05D008648 4.4e-33 144.4 98 70.4
Thecc.01G378800 Theobroma cacao HOM05D001546 ORTHO05D008648 4.4e-33 144.4 94 72.3
Gohir.A08G135700 Gossypium hirsutum HOM05D001546 ORTHO05D008648 5.8e-33 144.1 94 71.3
Gorai.004G162800 Gossypium raimondii HOM05D001546 ORTHO05D008648 5.8e-33 144.1 94 71.3
vmacro13415 Vaccinium macrocarpon HOM05D001546 ORTHO05D008648 5.8e-33 144.1 94 72.3
THA.LOC104817238 Tarenaya hassleriana HOM05D001546 ORTHO05D008648 7.5e-33 143.7 94 72.3
ECA236G2516 Erigeron canadensis HOM05D001546 ORTHO05D008648 1.3e-32 142.9 93 71.0
Peaxi162Scf00959g00125 Petunia axillaris HOM05D001546 ORTHO05D008648 1.7e-32 142.5 94 71.3
Phvul.010G082100 Phaseolus vulgaris HOM05D001546 ORTHO05D008648 2.2e-32 142.1 94 72.3
Sp4g27300 Schrenkiella parvula HOM05D001546 ORTHO05D008648 2.2e-32 142.1 94 70.2
SpUn0031_0020 Schrenkiella parvula HOM05D001546 ORTHO05D008648 2.2e-32 142.1 94 70.2
AL4G44380 Arabidopsis lyrata HOM05D001546 ORTHO05D008648 4.9e-32 141.0 94 70.2
BcaB02g08944 Brassica carinata HOM05D001546 ORTHO05D002908 4.9e-32 141.0 94 70.2
SGA_v2.0_scaffold95G28909 Striga asiatica HOM05D001546 ORTHO05D008648 4.9e-32 141.0 94 69.1
arahy.Tifrunner.gnm1.ann1.KRWE0T Arachis hypogaea HOM05D001546 ORTHO05D008648 6.4e-32 140.6 96 69.8
arahy.Tifrunner.gnm1.ann1.Y484AZ Arachis hypogaea HOM05D001546 ORTHO05D008648 6.4e-32 140.6 96 69.8
arahy.Tifrunner.gnm1.ann1.ZAG0TB Arachis hypogaea HOM05D001546 ORTHO05D008648 6.4e-32 140.6 96 69.8
Carub.0004s2788 Capsella rubella HOM05D001546 ORTHO05D008648 6.4e-32 140.6 94 69.1
Thhalv10001529m.g Eutrema salsugineum HOM05D001546 ORTHO05D008648 6.4e-32 140.6 94 69.1
Nitab4.5_0001329g0130 Nicotiana tabacum HOM05D001546 ORTHO05D008648 6.4e-32 140.6 94 70.2
Sc23g0003690 Simmondsia chinensis HOM05D001546 ORTHO05D008648 6.4e-32 140.6 95 69.5
Aqoxy7G00663 Aquilegia oxysepala HOM05D001546 ORTHO05D008648 1.1e-31 139.8 94 72.3
CARHR140490 Cardamine hirsuta HOM05D001546 ORTHO05D008648 1.1e-31 139.8 94 69.1
HanXRQChr16g0532481 Helianthus annuus HOM05D001546 ORTHO05D008648 1.1e-31 139.8 93 71.0
Nitab4.5_0003912g0060 Nicotiana tabacum HOM05D001546 ORTHO05D008648 1.1e-31 139.8 94 69.1
VMungo0331G1707 Vigna mungo HOM05D001546 ORTHO05D008648 1.1e-31 139.8 94 70.2
BcaC02g12229 Brassica carinata HOM05D001546 ORTHO05D008648 1.4e-31 139.4 94 69.1
A05p05300 Brassica napus HOM05D001546 ORTHO05D008648 1.4e-31 139.4 94 69.1
C04p06210 Brassica napus HOM05D001546 ORTHO05D008648 1.4e-31 139.4 94 69.1
BraA05t19499Z Brassica rapa HOM05D001546 ORTHO05D008648 1.4e-31 139.4 94 69.1
MBI12_g20322_MAGBIO Magnolia biondii HOM05D001546 ORTHO05D008648 1.4e-31 139.4 94 71.3
AT2G45280 Arabidopsis thaliana HOM05D001546 ORTHO05D008648 1.9e-31 139.0 94 70.2
PSO832G0911 Papaver somniferum HOM05D001546 ORTHO05D008648 1.9e-31 139.0 94 71.3
Aa31LG1G26810 Aethionema arabicum HOM05D001546 ORTHO05D008648 2.4e-31 138.7 94 69.1
Thhalv10001556m.g Eutrema salsugineum HOM05D001546 ORTHO05D008648 2.4e-31 138.7 92 69.6
PGR042G0240 Punica granatum HOM05D001546 ORTHO05D008648 3.2e-31 138.3 94 69.1
Solyc05g050960.4 Solanum lycopersicum HOM05D001546 ORTHO05D008648 7.0e-31 137.1 94 67.0
PGSC0003DMG400007020 Solanum tuberosum HOM05D001546 ORTHO05D008648 7.0e-31 137.1 94 66.0
Cc02_g24070 Coffea canephora HOM05D001546 ORTHO05D008648 9.2e-31 136.7 94 68.1
CAN.G295.12 Capsicum annuum HOM05D001546 ORTHO05D008648 1.2e-30 136.3 94 66.0
EL10Ac1g00872 Beta vulgaris HOM05D001546 ORTHO05D008648 2.0e-30 135.6 94 69.1
Sopen05g029430 Solanum pennellii HOM05D001546 ORTHO05D008648 2.0e-30 135.6 94 67.0
Zm00001eb160270 Zea mays HOM05D001546 ORTHO05D008648 3.5e-30 134.8 97 67.0
Nn1g01135 Nelumbo nucifera HOM05D001546 ORTHO05D008648 7.8e-30 133.7 94 66.0
Lalb_Chr07g0189931 Lupinus albus HOM05D001546 ORTHO05D008648 1.7e-29 132.5 94 68.1
DCAR_031520 Daucus carota HOM05D001546 ORTHO05D008648 2.3e-29 132.1 94 63.8
PSO782G0784 Papaver somniferum HOM05D001546 ORTHO05D008648 6.6e-29 130.6 85 74.1
unitig_0.g1301 Utricularia gibba HOM05D001546 ORTHO05D008648 6.6e-29 130.6 94 63.8
CDE04G0759 Ceratophyllum demersum HOM05D001546 ORTHO05D008648 8.6e-29 130.2 96 70.8
Hund17030 Selenicereus undatus HOM05D001546 ORTHO05D008648 1.9e-28 129.0 95 69.5
Potri.014G068100 Populus trichocarpa HOM05D001546 ORTHO05D008648 3.3e-28 128.3 96 64.6
ATR0757G033 Amborella trichopoda HOM05D001546 ORTHO05D008648 4.3e-28 127.9 96 63.5
Os01g0578000 Oryza sativa ssp. japonica HOM05D001546 ORTHO05D008648 2.8e-27 125.2 95 62.1
MELO3C006201.2 Cucumis melo HOM05D001546 ORTHO05D008648 8.0e-27 123.6 88 71.6
AUR62013651 Chenopodium quinoa HOM05D001546 ORTHO05D002908 1.2e-25 119.8 85 68.2
SalBow5G5288 Salvia bowleyana HOM05D001546 ORTHO05D008648 1.2e-25 119.8 86 64.0
EL10Ac7g17656 Beta vulgaris HOM05D001546 ORTHO05D008648 7.5e-25 117.1 79 70.9
Oeu005800.1 Olea europaea HOM05D001546 ORTHO05D008648 7.5e-25 117.1 138 46.4
SEGI_22011 Sequoiadendron giganteum HOM05D001546 ORTHO05D008648 1.3e-24 116.3 94 62.8
Actinidia12247 Actinidia chinensis HOM05D001546 ORTHO05D008648 1.5e-20 102.8 91 58.2
BcaB02g10315 Brassica carinata HOM05D001546 ORTHO05D008648 4.4e-17 91.3 75 60.0
Pp3c5_12400 Physcomitrium patens HOM05D001546 ORTHO05D008648 9.9e-17 90.1 94 45.7
CBR_g29371 Chara braunii HOM05D001546 ORTHO05D008648 1.3e-16 89.7 98 45.9
Mapoly0114s0015 Marchantia polymorpha HOM05D001546 ORTHO05D008648 1.1e-15 86.7 93 44.1
PRCOL_00003537 Prasinoderma coloniale HOM05D001546 ORTHO05D008648 5.1e-13 77.8 88 46.6
MCO01G368 Micromonas commoda HOM05D001363 ORTHO05D008648 5.6e-12 74.3 96 44.8
AagrBONN_evm.TU.Sc2ySwM_228.594 Anthoceros agrestis HOM05D001546 ORTHO05D008648 9.6e-12 73.6 87 46.0
Cre02.g102500 Chlamydomonas reinhardtii HOM05D001363 ORTHO05D008648 2.8e-11 72.0 84 47.6
Duzib138G0139 Durio zibethinus HOM05D001546 ORTHO05D002908 4.2e-07 58.2 39 71.8
Ah.05g176670 Amaranthus hybridus HOM05D001546 ORTHO05D008648 7.8e-06 53.9 39 69.2


User provided reference genes

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