Gene: FAN06G5055

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN06G5055
  • Transcript Identifier FAN06G5055.1
  • Gene Type Coding gene
  • Location Fvb7-2 : 9994323-10002815 : positive

Gene Family Information

  • ID HOM05D001546
  • #Genes/#Species 413/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb7-2-snap-gene-100.48.v1.0.a1
  • pacid 50492613

Descriptions

  • Description 2.2.1.1//2.2.1.2 - Transketolase / Glycoaldehyde transferase // Transaldolase / Glycerone transferase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT2G45280
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT2G45280
GO:0007143
ISO
PLAZA Integrative Orthologyfemale meiotic nuclear division AT2G45280
GO:0007140
ISO
PLAZA Integrative Orthologymale meiotic nuclear division AT2G45280
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT2G45280
GO:0045003
ISO
PLAZA Integrative Orthologydouble-strand break repair via synthesis-dependent strand annealing AT2G45280
GO:0016444
ISO
PLAZA Integrative Orthologysomatic cell DNA recombination AT2G45280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003824
IEA
InterProcatalytic activity
GO:0004802
IEA
InterProtransketolase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G45280
GO:0005509
ISO
PLAZA Integrative Orthologycalcium ion binding Zm00001eb378030
GO:0030145
ISO
PLAZA Integrative Orthologymanganese ion binding Zm00001eb378030
GO:0050897
ISO
PLAZA Integrative Orthologycobalt ion binding Zm00001eb378030

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033247 Transketolase family
IPR029061 Thiamin diphosphate-binding fold
IPR005474 Transketolase, N-terminal
IPR033925 Rad51/DMC1/RadA
IPR033248 Transketolase, C-terminal domain
IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II
IPR013632 DNA recombination and repair protein Rad51-like, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005475 Transketolase-like, pyrimidine-binding domain
IPR005478 Transketolase, bacterial-like
Mapman id Description
1.2.7 Photosynthesis.calvin cycle.transketolase
13.3.5.4.3.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.RAD51c-XRCC3 accessory DSB repair heterodimer.component RAD51C
3.9.2.3 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.transketolase