Gene: PGSC0003DMG400007020

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400007020
  • Transcript Identifier PGSC0003DMT400018063
  • Gene Type Coding gene
  • Location ST4.03ch05 : 45532281-45537285 : positive

Gene Family Information

  • ID HOM05D001546
  • #Genes/#Species 413/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37443841
  • id PGSC0003DMG400007020.v4.03
  • uniprot M1A9Z5

Descriptions

  • Description DNA repair and recombination protein radA
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000724
IEA
GOA Databasedouble-strand break repair via homologous recombination
GO:0016444
IEA
GOA Databasesomatic cell DNA recombination
GO:0007143
IEA
GOA Databasefemale meiotic nuclear division
GO:0007140
IEA
GOA Databasemale meiotic nuclear division
GO:0007131
IBA
IEA
GOA Databasereciprocal meiotic recombination
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0045003
IEA
GOA Databasedouble-strand break repair via synthesis-dependent strand annealing
GO:0000707
IBA
GOA Databasemeiotic DNA recombinase assembly
GO:0006281
IEA
GOA DatabaseDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004802
ISO
PLAZA Homology (enrichment)transketolase activity HOM05D001546
GO:0003824
ISO
PLAZA Homology (enrichment)catalytic activity HOM05D001546
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G45280
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000400
IBA
GOA Databasefour-way junction DNA binding
GO:0008821
IBA
GOA Databasecrossover junction endodeoxyribonuclease activity
GO:0008094
IEA
GOA DatabaseATPase, acting on DNA
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033063
IBA
GOA DatabaseRad51B-Rad51C-Rad51D-XRCC2 complex
GO:0033065
IBA
GOA DatabaseRad51C-XRCC3 complex
GO:0005657
IBA
GOA Databasereplication fork

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR033925 Rad51/DMC1/RadA
IPR016467 DNA recombination and repair protein, RecA-like
IPR013632 DNA recombination and repair protein Rad51-like, C-terminal
Mapman id Description
13.3.5.4.3.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.RAD51c-XRCC3 accessory DSB repair heterodimer.component RAD51C