Gene: CSS0048837
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0048837
- Transcript Identifier CSS0048837.1
- Gene Type Coding gene
- Location Chr3 : 159379072-159383714 : positive
Gene Family Information
- ID HOM05D001546
- #Genes/#Species 413/99
- Phylogenetic origin
- ID ORTHO05D008648
- #Genes/#Species 116/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0048837.1
Descriptions
- Description PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051321 | ISO | PLAZA Integrative Orthology | meiotic cell cycle | AT2G45280 |
| GO:0007131 | ISO | PLAZA Integrative Orthology | reciprocal meiotic recombination | AT2G45280 |
| GO:0007143 | ISO | PLAZA Integrative Orthology | female meiotic nuclear division | AT2G45280 |
| GO:0007140 | ISO | PLAZA Integrative Orthology | male meiotic nuclear division | AT2G45280 |
| GO:0000724 | ISO | PLAZA Integrative Orthology | double-strand break repair via homologous recombination | AT2G45280 |
| GO:0045003 | ISO | PLAZA Integrative Orthology | double-strand break repair via synthesis-dependent strand annealing | AT2G45280 |
| GO:0016444 | ISO | PLAZA Integrative Orthology | somatic cell DNA recombination | AT2G45280 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G45280 |
| GO:0003824 | ISO | PLAZA Homology (enrichment) | catalytic activity | HOM05D001546 |
| GO:0004802 | ISO | PLAZA Homology (enrichment) | transketolase activity | HOM05D001546 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR010995 | DNA repair Rad51/transcription factor NusA, alpha-helical |
| IPR013632 | DNA recombination and repair protein Rad51-like, C-terminal |
| IPR033925 | Rad51/DMC1/RadA |
| IPR016467 | DNA recombination and repair protein, RecA-like |
| Mapman id | Description |
|---|---|
| 13.3.5.4.3.1 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.RAD51c-XRCC3 accessory DSB repair heterodimer.component RAD51C |