Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 0.0e+00 1958.0 1118 100.0
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 1.3e-48 199.5 380 33.7
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 1.3e-46 193.0 321 34.3
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 2.8e-46 191.8 318 35.8
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 1.7e-43 182.6 332 35.2
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 2.9e-43 181.8 336 33.3
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 2.9e-43 181.8 316 36.1
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 3.8e-43 181.4 349 33.8
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 1.1e-42 179.9 329 35.0
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 1.9e-42 179.1 329 35.0
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 2.5e-42 178.7 317 35.3
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 2.5e-42 178.7 317 35.3
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 5.5e-42 177.6 335 33.1
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 7.1e-42 177.2 340 33.5
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 2.1e-41 175.6 336 33.3
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 2.1e-41 175.6 336 33.3
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 2.1e-41 175.6 317 34.4
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 2.7e-41 175.3 330 33.6
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 2.7e-41 175.3 316 33.2
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 2.7e-41 175.3 324 34.0
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 2.7e-41 175.3 335 33.1
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 2.7e-41 175.3 335 34.0
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 2.7e-41 175.3 314 33.8
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 3.5e-41 174.9 327 34.6
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 3.5e-41 174.9 334 34.4
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 3.5e-41 174.9 336 32.4
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 3.5e-41 174.9 319 34.5
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 3.5e-41 174.9 316 33.2
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 4.6e-41 174.5 353 32.6
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 4.6e-41 174.5 327 33.9
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 4.6e-41 174.5 317 34.7
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 4.6e-41 174.5 323 34.1
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 4.6e-41 174.5 331 34.1
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 4.6e-41 174.5 317 34.4
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 6.0e-41 174.1 317 34.4
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 6.0e-41 174.1 342 32.7
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 6.0e-41 174.1 315 34.6
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 7.9e-41 173.7 317 34.4
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 7.9e-41 173.7 328 34.1
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 7.9e-41 173.7 328 34.1
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 7.9e-41 173.7 327 34.6
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 1.0e-40 173.3 314 33.4
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.3e-40 172.9 339 32.4
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.3e-40 172.9 331 34.1
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.3e-40 172.9 331 33.8
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 1.3e-40 172.9 314 33.4
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 2.3e-40 172.2 317 34.4
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 2.3e-40 172.2 317 34.1
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 2.3e-40 172.2 316 34.8
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 3.0e-40 171.8 317 33.8
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 3.0e-40 171.8 317 33.8
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 3.0e-40 171.8 320 33.1
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 3.0e-40 171.8 360 31.1
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 3.0e-40 171.8 314 34.4
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 3.9e-40 171.4 349 32.7
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 3.9e-40 171.4 318 33.0
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 3.9e-40 171.4 335 32.5
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 5.1e-40 171.0 312 31.4
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 5.1e-40 171.0 331 33.5
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 8.7e-40 170.2 317 33.4
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 8.7e-40 170.2 327 33.6
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 1.1e-39 169.9 318 34.3
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 1.1e-39 169.9 318 34.3
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 1.1e-39 169.9 318 34.3
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 1.1e-39 169.9 339 33.3
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 1.5e-39 169.5 317 33.4
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 1.5e-39 169.5 315 33.7
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 1.5e-39 169.5 319 33.9
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 1.9e-39 169.1 325 32.6
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 2.5e-39 168.7 317 33.4
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 3.3e-39 168.3 317 33.4
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 4.3e-39 167.9 316 32.6
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 4.3e-39 167.9 320 32.5
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 4.3e-39 167.9 312 32.7
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 4.3e-39 167.9 317 33.1
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 5.7e-39 167.5 317 34.1
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 5.7e-39 167.5 315 33.7
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 7.4e-39 167.2 315 34.3
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 9.7e-39 166.8 409 31.3
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 9.7e-39 166.8 312 33.0
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 9.7e-39 166.8 316 32.9
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 1.3e-38 166.4 315 33.0
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 2.8e-38 165.2 317 34.4
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 4.8e-38 164.5 315 32.4
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 4.8e-38 164.5 317 34.4
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 6.3e-38 164.1 315 33.0
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 6.3e-38 164.1 315 33.7
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 1.4e-37 162.9 316 33.9
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 1.4e-37 162.9 327 32.4
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 2.4e-37 162.2 379 30.3
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 2.0e-36 159.1 336 31.0
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 1.7e-35 156.0 290 35.2
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 8.5e-35 153.7 336 30.7
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 5.5e-34 151.0 309 32.7
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 3.6e-33 148.3 343 30.3
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 4.6e-33 147.9 273 33.0
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 1.0e-32 146.7 377 28.4
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 2.3e-32 145.6 281 34.9
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 6.7e-32 144.1 324 30.9
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 2.0e-31 142.5 319 32.3
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 9.1e-29 133.7 348 28.4
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 6.5e-27 127.5 279 33.0
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 1.4e-26 126.3 314 28.0
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 4.7e-25 121.3 253 33.2
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 1.0e-24 120.2 251 31.5
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 1.8e-24 119.4 251 32.3
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 2.4e-21 109.0 442 25.1
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 5.9e-20 104.4 450 25.1
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 8.5e-19 100.5 221 31.7
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 1.4e-13 83.2 193 29.5
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 2.4e-13 82.4 157 33.1
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 1.0e-08 67.0 114 35.1
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 6.7e-08 64.3 165 28.5
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 4.4e-07 61.6 221 28.5


User provided reference genes

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