Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 7.0e-226 786.9 396 100.0
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 1.1e-114 417.5 398 57.3
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 2.8e-110 402.9 375 57.9
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 1.6e-108 397.1 380 57.1
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 8.5e-107 391.3 396 56.1
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 2.1e-105 386.7 383 54.3
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 2.6e-103 379.8 361 57.6
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 2.2e-102 376.7 393 53.9
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 4.8e-102 375.6 355 57.2
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 1.4e-101 374.0 378 55.6
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 4.1e-101 372.5 395 53.4
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 7.0e-101 371.7 369 55.3
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 9.1e-101 371.3 376 54.8
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 5.9e-100 368.6 371 56.9
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 5.9e-100 368.6 386 55.2
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 1.7e-99 367.1 373 56.8
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 6.6e-99 365.2 374 55.1
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 8.6e-99 364.8 373 55.5
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 8.6e-99 364.8 391 54.7
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 4.2e-98 362.5 344 56.4
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 2.1e-97 360.1 372 52.4
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 2.8e-97 359.8 389 50.4
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 3.6e-97 359.4 389 54.2
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 3.6e-97 359.4 356 54.8
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 1.0e-96 357.8 356 56.5
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 1.4e-96 357.5 372 51.3
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 5.2e-96 355.5 399 51.9
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 1.5e-95 354.0 369 52.3
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 2.0e-95 353.6 380 53.2
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 4.4e-95 352.4 378 53.2
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 5.7e-95 352.1 379 53.6
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 5.7e-95 352.1 381 51.4
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 7.5e-95 351.7 374 52.1
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.3e-94 350.9 350 54.9
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 1.7e-94 350.5 376 51.9
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 2.2e-94 350.1 375 53.1
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 2.8e-94 349.7 367 53.7
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 2.8e-94 349.7 375 51.5
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 6.3e-94 348.6 367 53.7
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 8.3e-94 348.2 363 54.8
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 8.3e-94 348.2 366 53.6
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 2.4e-93 346.7 366 53.3
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 2.4e-93 346.7 349 55.0
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 4.1e-93 345.9 353 54.4
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 9.2e-93 344.7 386 51.8
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 1.2e-92 344.4 351 53.0
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 5.9e-92 342.0 330 54.5
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 1.7e-91 340.5 346 52.0
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 6.6e-91 338.6 366 52.5
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 6.6e-91 338.6 329 56.5
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 8.6e-91 338.2 303 57.4
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 1.9e-90 337.0 368 54.9
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 4.3e-90 335.9 363 53.4
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 1.2e-89 334.3 364 56.3
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 1.2e-89 334.3 374 50.5
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 3.6e-89 332.8 351 51.9
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 1.0e-88 331.3 374 50.3
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 1.4e-88 330.9 374 50.3
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 2.3e-88 330.1 387 49.4
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 4.0e-88 329.3 331 55.0
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 4.0e-88 329.3 384 50.8
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 1.5e-87 327.4 382 51.8
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 7.5e-87 325.1 362 51.1
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 9.8e-87 324.7 378 50.0
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 2.2e-86 323.6 341 54.8
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 4.9e-86 322.4 366 51.4
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 6.4e-86 322.0 392 48.2
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 8.3e-86 321.6 352 51.4
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 1.4e-85 320.9 364 48.4
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 1.9e-85 320.5 393 49.4
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 7.8e-84 315.1 356 51.1
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 1.3e-83 314.3 352 50.6
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 2.3e-83 313.5 352 50.6
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 3.9e-83 312.8 381 49.1
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 5.0e-83 312.4 366 49.7
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 2.5e-82 310.1 373 48.8
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 5.6e-82 308.9 385 47.0
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 5.6e-82 308.9 273 58.2
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 3.6e-81 306.2 360 48.6
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 3.6e-81 306.2 371 49.3
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 1.4e-80 304.3 354 51.1
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 4.0e-80 302.8 356 49.2
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 4.0e-80 302.8 356 49.2
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 6.0e-76 288.9 421 44.2
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 1.1e-74 284.6 290 55.5
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 1.9e-74 283.9 359 47.4
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 4.0e-72 276.2 363 47.4
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 5.8e-71 272.3 345 45.2
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 7.5e-71 271.9 274 52.6
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 1.1e-69 268.1 561 36.0
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 2.5e-66 256.9 370 44.9
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 6.9e-56 222.2 244 51.2
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.2e-54 217.2 316 40.5
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 3.0e-51 206.8 228 50.9
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 2.4e-48 197.2 315 37.8
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 9.0e-48 195.3 190 57.4
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 2.2e-46 190.7 172 58.7
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.4e-45 188.0 107 82.2
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.8e-43 181.0 204 51.5
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.4e-40 170.6 201 47.8
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 5.8e-39 166.0 359 36.2
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 9.3e-37 158.7 194 46.4
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.1e-36 157.5 201 45.8
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.9e-34 151.0 166 52.4
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 4.0e-32 143.3 100 61.0
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 6.1e-28 129.4 270 37.8
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 1.5e-23 114.8 113 54.0
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 3.8e-22 110.2 111 55.0
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 2.5e-18 97.4 149 39.6
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 4.4e-10 70.1 128 33.6


User provided reference genes

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