Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 8.3e-189 663.7 368 100.0
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 5.9e-78 295.4 276 70.7
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 1.3e-72 277.7 273 66.3
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 2.2e-72 276.9 276 65.2
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 8.3e-72 275.0 274 64.6
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 1.2e-70 271.2 273 63.4
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 5.9e-70 268.9 274 64.6
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 6.6e-69 265.4 273 61.5
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 1.1e-68 264.6 273 63.0
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 1.0e-66 258.1 273 60.4
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 2.3e-66 256.9 272 57.4
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 2.6e-65 253.4 273 60.8
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 3.4e-65 253.1 274 57.7
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 3.4e-65 253.1 273 61.5
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 4.4e-65 252.7 329 48.9
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 7.5e-65 251.9 274 57.3
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.2e-64 250.4 273 56.8
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 2.2e-64 250.4 273 56.4
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 2.9e-64 250.0 273 53.1
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 4.9e-64 249.2 273 56.4
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 6.4e-64 248.8 276 60.1
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.1e-63 248.1 273 61.2
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 2.4e-63 246.9 279 60.9
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 3.2e-63 246.5 272 60.7
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 4.1e-63 246.1 296 51.0
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 5.4e-63 245.7 275 58.9
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 5.4e-63 245.7 279 60.9
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 9.2e-63 245.0 273 61.9
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 4.6e-62 242.7 273 61.2
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 4.6e-62 242.7 273 59.0
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 6.0e-62 242.3 273 61.2
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 1.7e-61 240.7 273 58.6
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 5.0e-61 239.2 273 57.5
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 8.6e-61 238.4 274 61.3
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 1.1e-60 238.0 275 55.3
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 4.3e-60 236.1 273 53.1
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 5.6e-60 235.7 273 57.5
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 7.3e-60 235.3 273 59.0
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 1.2e-59 234.6 274 56.9
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 2.8e-59 233.4 274 55.5
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 2.8e-59 233.4 272 58.5
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 1.1e-58 231.5 278 60.1
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 1.8e-58 230.7 278 60.8
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 3.1e-58 229.9 274 57.3
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 1.5e-57 227.6 273 52.4
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 2.0e-57 227.3 272 58.1
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 2.0e-57 227.3 272 58.1
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 4.4e-57 226.1 273 51.6
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 5.8e-57 225.7 273 56.0
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 7.5e-57 225.3 272 55.5
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 7.5e-57 225.3 272 55.5
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 7.5e-57 225.3 273 53.1
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 9.8e-57 224.9 273 52.7
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 9.8e-57 224.9 273 52.7
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 6.4e-56 222.2 274 54.0
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 6.4e-56 222.2 272 59.6
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 8.3e-56 221.9 275 54.2
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.9e-55 220.7 272 53.3
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 3.2e-55 219.9 274 54.4
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 3.2e-55 219.9 300 54.0
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 4.1e-55 219.5 273 55.7
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 9.2e-55 218.4 274 55.8
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 9.2e-55 218.4 288 54.2
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 2.7e-54 216.9 272 54.8
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 2.7e-54 216.9 277 57.0
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 5.1e-53 212.6 276 50.0
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 8.6e-53 211.8 274 54.4
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 3.3e-52 209.9 260 55.0
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 5.6e-52 209.1 272 51.8
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 9.5e-52 208.4 272 55.9
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 1.6e-51 207.6 277 56.0
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 1.4e-50 204.5 274 53.6
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 2.6e-49 200.3 273 54.9
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 4.4e-49 199.5 274 55.8
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 7.5e-49 198.7 272 54.0
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 9.9e-49 198.4 271 49.4
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.9e-48 196.8 272 53.7
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 6.4e-48 195.7 272 53.3
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 1.9e-47 194.1 275 50.5
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 3.2e-47 193.4 277 48.0
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 2.1e-46 190.7 274 48.2
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 2.7e-46 190.3 274 51.8
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 1.0e-45 188.3 275 53.8
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 5.1e-45 186.0 267 48.3
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 1.5e-44 184.5 275 44.0
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 4.3e-44 183.0 119 76.5
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 9.5e-44 181.8 312 47.4
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 9.5e-44 181.8 229 60.3
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 1.8e-42 177.6 275 46.9
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 1.5e-41 174.5 273 45.8
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 3.4e-41 173.3 276 47.1
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 9.9e-41 171.8 276 46.7
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 2.2e-40 170.6 276 48.9
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 3.2e-39 166.8 276 50.0
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 5.4e-39 166.0 304 44.7
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 9.2e-39 165.2 278 45.3
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 1.5e-36 157.9 295 44.4
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 9.6e-36 155.2 232 55.6
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 2.6e-33 147.1 296 43.6
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 5.1e-29 132.9 94 69.1
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 8.1e-27 125.6 163 53.4
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 1.1e-26 125.2 338 36.1
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 6.9e-26 122.5 285 38.2
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 3.8e-24 116.7 68 79.4
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 1.1e-23 115.2 232 44.4
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 5.4e-23 112.8 68 76.5
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.2e-22 111.7 276 36.2
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.5e-22 110.2 205 41.5
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 9.6e-20 102.1 207 40.1
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 1.3e-19 101.7 156 50.6
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.7e-16 91.3 130 53.1
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 2.2e-16 90.9 161 51.6
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.5e-12 77.4 226 40.3
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.8e-10 71.2 202 34.2
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 5.3e-10 69.7 80 56.2
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 5.3e-10 69.7 80 56.2
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.9e-07 61.2 205 32.7
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 4.6e-06 56.6 78 48.7


User provided reference genes

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