Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 5.5e-86 320.9 155 100.0
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 4.3e-78 294.7 178 83.7
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 3.5e-64 248.4 174 71.8
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 1.0e-63 246.9 176 69.9
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 7.3e-62 240.7 173 70.5
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 2.1e-61 239.2 176 67.6
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 3.6e-61 238.4 174 66.7
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 3.6e-61 238.4 174 66.7
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 2.3e-60 235.7 175 66.3
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 3.1e-60 235.3 173 68.2
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 1.2e-59 233.4 174 67.8
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 1.5e-59 233.0 174 66.1
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 1.5e-59 233.0 176 64.8
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 2.0e-59 232.6 174 64.4
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 4.4e-59 231.5 176 64.2
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 5.8e-59 231.1 173 65.9
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 1.3e-58 229.9 176 63.6
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 2.2e-58 229.2 176 66.5
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 2.9e-58 228.8 176 64.2
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 3.7e-58 228.4 176 65.9
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 4.9e-58 228.0 174 63.8
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 4.9e-58 228.0 174 63.8
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 6.4e-58 227.6 176 63.1
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 8.3e-58 227.3 176 65.3
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 8.3e-58 227.3 174 66.1
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 1.4e-57 226.5 176 63.6
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 1.9e-57 226.1 168 69.0
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 3.2e-57 225.3 176 64.2
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 4.1e-57 224.9 176 65.3
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 5.4e-57 224.6 176 63.1
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 9.2e-57 223.8 174 62.1
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 9.2e-57 223.8 174 66.7
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.2e-56 223.4 171 66.7
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 1.2e-56 223.4 174 66.1
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 2.1e-56 222.6 173 63.0
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 2.7e-56 222.2 176 64.2
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 2.7e-56 222.2 174 62.6
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 3.5e-56 221.9 176 64.2
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 4.6e-56 221.5 177 63.3
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 4.6e-56 221.5 174 63.2
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 4.6e-56 221.5 175 63.4
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 2.3e-55 219.2 174 63.2
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 3.0e-55 218.8 174 62.6
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 3.0e-55 218.8 176 61.9
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 1.5e-54 216.5 176 61.4
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 1.5e-54 216.5 175 63.4
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 1.9e-54 216.1 174 62.1
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 4.3e-54 214.9 173 63.0
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 5.6e-54 214.5 180 63.3
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 5.6e-54 214.5 173 62.4
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 5.6e-54 214.5 166 64.5
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 1.6e-53 213.0 176 61.9
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 2.1e-53 212.6 174 60.9
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 3.6e-53 211.8 174 60.9
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 8.1e-53 210.7 174 60.3
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 8.1e-53 210.7 217 53.0
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 1.1e-52 210.3 174 60.3
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 1.4e-52 209.9 174 61.5
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 2.4e-52 209.1 172 60.5
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 3.1e-52 208.8 173 61.3
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 8.9e-52 207.2 167 64.7
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 2.0e-51 206.1 179 57.5
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 2.6e-51 205.7 165 61.2
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 3.8e-50 201.8 173 57.2
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 6.4e-50 201.1 189 54.0
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 1.1e-49 200.3 173 58.4
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 1.1e-49 200.3 173 58.4
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 2.4e-49 199.1 213 52.1
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 9.2e-49 197.2 205 53.7
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 1.6e-48 196.4 159 62.9
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 6.0e-48 194.5 173 57.8
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 7.8e-48 194.1 173 57.2
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 1.7e-47 193.0 173 57.8
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 3.9e-47 191.8 176 59.1
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 8.7e-47 190.7 163 62.0
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 8.7e-47 190.7 174 56.3
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 8.7e-47 190.7 154 62.3
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 1.5e-46 189.9 173 57.2
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 1.5e-46 189.9 173 56.1
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 1.5e-46 189.9 173 56.1
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 2.5e-46 189.1 147 65.3
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 1.3e-45 186.8 174 54.0
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 2.8e-45 185.7 174 55.2
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 2.8e-45 185.7 149 62.4
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 3.6e-45 185.3 170 56.5
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 3.6e-45 185.3 155 60.6
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 8.1e-45 184.1 173 54.9
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 1.1e-44 183.7 205 48.8
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 4.0e-44 181.8 150 61.3
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 6.9e-44 181.0 173 54.3
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 1.2e-43 180.3 176 55.1
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 3.4e-43 178.7 176 55.1
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 1.9e-38 162.9 174 51.1
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 6.2e-37 157.9 140 56.4
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 8.1e-37 157.5 173 49.1
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 1.5e-35 153.3 173 50.3
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 7.6e-35 151.0 149 53.0
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 9.3e-33 144.1 116 62.1
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 9.0e-28 127.5 127 54.3
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 7.6e-27 124.4 172 41.3
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 1.7e-26 123.2 179 39.1
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 3.2e-25 119.0 156 45.5
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 5.5e-25 118.2 109 57.8
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 4.8e-21 105.1 180 34.4
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 6.2e-21 104.8 68 70.6
SEGI_12408 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 4.2e-09 65.5 50 58.0
Cre03.g180200 Chlamydomonas reinhardtii HOM05D006688 ORTHO05D008550 2.5e-06 56.2 171 26.3
CBR_g13009 Chara braunii HOM05D006688 ORTHO05D008550 7.4e-06 54.7 51 49.0


User provided reference genes

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