Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 4.4e-111 404.8 234 100.0
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 1.6e-84 316.6 260 73.8
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 1.1e-80 303.9 263 68.8
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 1.1e-74 283.9 261 65.1
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 1.5e-74 283.5 256 63.7
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 9.6e-74 280.8 260 63.1
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 2.8e-73 279.3 263 63.5
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.4e-72 276.9 264 65.5
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 5.3e-72 275.0 265 64.9
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 1.2e-71 273.9 264 63.6
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 1.5e-71 273.5 264 63.6
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 3.4e-71 272.3 264 63.3
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 2.2e-70 269.6 254 66.9
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 4.9e-70 268.5 264 64.4
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 4.9e-70 268.5 260 65.4
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 1.1e-69 267.3 253 61.3
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 1.4e-69 266.9 253 61.3
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 3.2e-69 265.8 262 64.1
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 3.0e-67 259.2 263 63.5
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 6.7e-67 258.1 263 63.9
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 9.6e-66 254.2 265 61.5
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 9.6e-66 254.2 263 63.1
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 2.8e-65 252.7 264 61.0
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 8.1e-65 251.1 263 60.1
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.1e-64 250.8 263 62.4
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 1.1e-64 250.8 249 65.1
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 1.1e-64 250.8 263 59.7
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 1.4e-64 250.4 263 60.1
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 1.8e-64 250.0 264 62.5
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 2.4e-64 249.6 263 59.7
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.4e-64 249.6 263 59.7
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 3.1e-64 249.2 296 53.0
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 4.0e-64 248.8 292 51.7
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 9.0e-64 247.7 263 58.9
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 9.0e-64 247.7 262 60.7
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 1.2e-63 247.3 262 62.2
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 1.5e-63 246.9 255 63.1
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.0e-63 246.5 263 58.6
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 2.0e-63 246.5 262 59.9
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 7.6e-63 244.6 263 61.2
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 1.3e-62 243.8 259 60.6
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 2.2e-62 243.0 252 62.3
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 8.4e-62 241.1 263 60.5
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 3.2e-61 239.2 261 58.2
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 7.1e-61 238.0 264 63.6
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 9.3e-61 237.7 251 59.4
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 2.1e-60 236.5 259 59.1
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 3.5e-60 235.7 265 60.0
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 6.0e-60 235.0 263 59.3
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 1.0e-59 234.2 262 59.2
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 1.8e-59 233.4 260 59.2
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 1.8e-59 233.4 260 59.2
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 3.0e-59 232.6 274 56.9
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 5.1e-59 231.9 260 54.2
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 8.7e-59 231.1 265 60.0
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 1.1e-58 230.7 265 58.9
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 2.5e-58 229.6 262 58.4
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 2.5e-58 229.6 263 60.5
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 2.5e-58 229.6 242 55.8
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 2.5e-58 229.6 265 60.0
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 3.3e-58 229.2 263 60.5
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 4.3e-58 228.8 261 57.9
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 9.6e-58 227.6 263 60.1
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 1.6e-57 226.9 259 57.9
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 2.8e-57 226.1 262 57.6
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 2.0e-55 219.9 262 57.6
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 4.5e-55 218.8 259 56.8
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 4.5e-55 218.8 257 60.3
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 2.9e-54 216.1 304 51.0
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 3.8e-54 215.7 251 57.4
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 3.8e-54 215.7 254 56.7
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 8.5e-54 214.5 258 55.8
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 1.1e-53 214.2 262 59.2
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 1.4e-53 213.8 252 58.7
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 1.4e-53 213.8 254 57.9
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 1.2e-52 210.7 260 56.5
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 1.3e-51 207.2 258 55.4
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 1.8e-51 206.8 260 57.3
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.5e-50 203.8 297 52.9
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 9.7e-50 201.1 255 57.6
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 9.7e-50 201.1 256 55.1
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 1.3e-49 200.7 249 53.4
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 2.4e-48 196.4 232 53.9
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 1.5e-47 193.7 239 54.8
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 1.5e-47 193.7 255 53.7
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 2.0e-47 193.4 260 55.0
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 1.7e-46 190.3 229 53.7
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 2.9e-46 189.5 259 55.6
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 3.8e-46 189.1 252 53.6
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 1.4e-45 187.2 253 53.0
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 3.1e-40 169.5 116 77.6
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 4.5e-39 165.6 263 47.1
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 5.9e-39 165.2 301 44.2
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 7.7e-39 164.9 226 48.7
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 2.2e-38 163.3 259 49.4
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 3.8e-38 162.5 218 56.0
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 2.3e-35 153.3 288 42.4
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.8e-33 146.4 165 59.4
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 3.7e-33 146.0 102 72.5
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 6.3e-33 145.2 206 55.8
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 7.7e-31 138.3 292 43.2
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.2e-30 136.7 165 56.4
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 2.1e-28 130.2 262 42.0
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 2.6e-26 123.2 209 50.7
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 4.4e-26 122.5 334 35.9
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 1.1e-24 117.9 70 81.4
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.7e-23 113.2 152 52.6
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 7.7e-23 111.7 70 72.9
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.0e-22 111.3 187 55.6
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 5.0e-22 109.0 151 52.3
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 4.7e-20 102.4 232 39.2
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.4e-19 100.9 165 49.7
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 2.3e-19 100.1 144 57.6
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 5.2e-19 99.0 143 58.7
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.5e-15 85.9 124 49.2
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.5e-15 85.9 124 49.2
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 1.8e-08 63.9 61 65.6


User provided reference genes

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