Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C215T10 Lonicera japonica HOM05D003791 ORTHO05D019539 3.6e-67 258.1 127 100.0
Dinv12566 Davidia involucrata HOM05D003791 ORTHO05D004961 1.4e-39 166.4 122 68.9
Dinv29393 Davidia involucrata HOM05D003791 ORTHO05D004961 3.2e-39 165.2 121 69.4
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla HOM05D003791 ORTHO05D004961 8.7e-37 157.1 119 65.5
DCAR_018754 Daucus carota HOM05D003791 ORTHO05D004961 1.1e-36 156.8 121 63.6
Cc01_g10100 Coffea canephora HOM05D003791 ORTHO05D004961 4.0e-34 148.3 121 61.2
GSVIVG01031443001 Vitis vinifera HOM05D003791 ORTHO05D004961 4.0e-34 148.3 122 63.9
Rhsim13G0102400 Rhododendron simsii HOM05D003791 ORTHO05D004961 9.0e-34 147.1 121 63.6
Solyc11g066560.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 9.9e-33 143.7 123 60.2
CAN.G546.67 Capsicum annuum HOM05D003791 ORTHO05D004961 1.3e-32 143.3 123 60.2
DCAR_006140 Daucus carota HOM05D003791 ORTHO05D004961 1.7e-32 142.9 120 60.8
TPR.G35046 Trifolium pratense HOM05D003791 ORTHO05D004961 2.2e-32 142.5 117 59.0
Nitab4.5_0004517g0020 Nicotiana tabacum HOM05D003791 ORTHO05D004961 2.9e-32 142.1 119 62.2
Ciclev10027764m.g Citrus clementina HOM05D003791 ORTHO05D004961 4.9e-32 141.4 121 57.9
Sopen11g026300 Solanum pennellii HOM05D003791 ORTHO05D004961 8.4e-32 140.6 123 59.3
Peaxi162Scf00150g00213 Petunia axillaris HOM05D003791 ORTHO05D004961 1.1e-31 140.2 123 57.7
vmacro03244 Vaccinium macrocarpon HOM05D003791 ORTHO05D004961 1.9e-31 139.4 121 57.9
CAN.G1432.22 Capsicum annuum HOM05D003791 ORTHO05D004961 2.4e-31 139.0 122 59.8
ClCG00G003900 Citrullus lanatus HOM05D003791 ORTHO05D004961 4.2e-31 138.3 118 55.9
Duzib168G1694 Durio zibethinus HOM05D003791 ORTHO05D004961 5.5e-31 137.9 122 56.6
Lj3g0026116 Lotus japonicus HOM05D003791 ORTHO05D004961 7.1e-31 137.5 115 59.1
CiPaw.13G143800 Carya illinoinensis HOM05D003791 ORTHO05D004961 9.3e-31 137.1 122 57.4
CSS0014729 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.2e-30 136.7 122 59.0
MD03G1129800 Malus domestica HOM05D003791 ORTHO05D004961 1.2e-30 136.7 119 55.5
MELO3C004827.2 Cucumis melo HOM05D003791 ORTHO05D004961 1.6e-30 136.3 118 55.9
Peaxi162Scf00114g00310 Petunia axillaris HOM05D003791 ORTHO05D004961 1.6e-30 136.3 119 58.8
VMungo1127G0886 Vigna mungo HOM05D003791 ORTHO05D004961 1.6e-30 136.3 121 57.0
Glyma.12G083300 Glycine max HOM05D003791 ORTHO05D004961 2.7e-30 135.6 117 55.6
Atru.chr3.3491 Acer truncatum HOM05D003791 ORTHO05D004961 3.5e-30 135.2 120 59.2
CsaV3_1G014360 Cucumis sativus L. HOM05D003791 ORTHO05D004961 4.6e-30 134.8 118 55.1
ECA233G0170 Erigeron canadensis HOM05D003791 ORTHO05D004961 6.0e-30 134.4 118 55.1
Medtr4g056480 Medicago truncatula HOM05D003791 ORTHO05D004961 6.0e-30 134.4 117 58.1
Oeu035522.1 Olea europaea HOM05D003791 ORTHO05D004961 7.9e-30 134.0 124 58.9
QL01p014586 Quercus lobata HOM05D003791 ORTHO05D004961 7.9e-30 134.0 119 57.1
RcHm_v2.0_Chr5g0056311 Rosa chinensis HOM05D003791 ORTHO05D004961 7.9e-30 134.0 120 54.2
Hund00856 Selenicereus undatus HOM05D003791 ORTHO05D004961 1.8e-29 132.9 121 54.5
Solyc06g074740.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 2.3e-29 132.5 127 57.5
FvH4_3g30370 Fragaria vesca HOM05D003791 ORTHO05D004961 3.9e-29 131.7 120 54.2
FAN11G2854 Fragaria x ananassa HOM05D003791 ORTHO05D004961 3.9e-29 131.7 120 54.2
Sopen06g031150 Solanum pennellii HOM05D003791 ORTHO05D004961 5.1e-29 131.3 124 58.1
Actinidia07195 Actinidia chinensis HOM05D003791 ORTHO05D004961 6.7e-29 131.0 122 58.2
FAN21G1169 Fragaria x ananassa HOM05D003791 ORTHO05D004961 6.7e-29 131.0 120 54.2
FAN21G3702 Fragaria x ananassa HOM05D003791 ORTHO05D004961 6.7e-29 131.0 120 54.2
HanXRQChr13g0403561 Helianthus annuus HOM05D003791 ORTHO05D004961 1.1e-28 130.2 117 53.0
Phvul.011G088100 Phaseolus vulgaris HOM05D003791 ORTHO05D004961 1.1e-28 130.2 121 55.4
CiPaw.14G105700 Carya illinoinensis HOM05D003791 ORTHO05D004961 1.9e-28 129.4 121 54.5
Duzib170G1073 Durio zibethinus HOM05D003791 ORTHO05D004961 1.9e-28 129.4 121 52.9
FAN16G1431 Fragaria x ananassa HOM05D003791 ORTHO05D004961 1.9e-28 129.4 120 53.3
Psat7g191520 Pisum sativum HOM05D003791 ORTHO05D004961 1.9e-28 129.4 119 56.3
Lalb_Chr03g0027821 Lupinus albus HOM05D003791 ORTHO05D004961 2.5e-28 129.0 120 54.2
QL03p064651 Quercus lobata HOM05D003791 ORTHO05D004961 3.3e-28 128.6 119 56.3
Lj3g0020816 Lotus japonicus HOM05D003791 ORTHO05D004961 5.6e-28 127.9 120 51.7
Ca_19327_v3 Cicer arietinum L. HOM05D003791 ORTHO05D004961 7.4e-28 127.5 115 55.7
Potri.009G002400 Populus trichocarpa HOM05D003791 ORTHO05D004961 7.4e-28 127.5 120 54.2
Potri.001G212700 Populus trichocarpa HOM05D003791 ORTHO05D004961 9.6e-28 127.1 121 52.9
Cfa010128 Carpinus fangiana HOM05D003791 ORTHO05D004961 1.6e-27 126.3 120 53.3
CANSAT64G0962 Cannabis sativa HOM05D003791 ORTHO05D004961 2.8e-27 125.6 124 54.8
Glyma.11G191000 Glycine max HOM05D003791 ORTHO05D004961 2.8e-27 125.6 120 53.3
Sabra04G0148600 Salix brachista HOM05D003791 ORTHO05D004961 2.8e-27 125.6 121 53.7
Thecc.09G295700 Theobroma cacao HOM05D003791 ORTHO05D004961 3.7e-27 125.2 121 55.4
Gohir.A08G003200 Gossypium hirsutum HOM05D003791 ORTHO05D004961 4.8e-27 124.8 121 54.5
TAR369G0287 Trochodendron aralioides HOM05D003791 ORTHO05D004961 4.8e-27 124.8 121 55.4
Nn6g35161 Nelumbo nucifera HOM05D003791 ORTHO05D004961 8.2e-27 124.0 119 51.3
Gohir.A09G087400 Gossypium hirsutum HOM05D003791 ORTHO05D004961 1.4e-26 123.2 123 54.5
TAR623G0647 Trochodendron aralioides HOM05D003791 ORTHO05D004961 1.4e-26 123.2 121 52.1
Manes.04G011800 Manihot esculenta HOM05D003791 ORTHO05D004961 3.1e-26 122.1 121 53.7
Sed0022437 Sechium edule HOM05D003791 ORTHO05D004961 4.0e-26 121.7 119 49.6
Actinidia24158 Actinidia chinensis HOM05D003791 ORTHO05D004961 5.3e-26 121.3 121 56.2
Gorai.006G103500 Gossypium raimondii HOM05D003791 ORTHO05D004961 6.9e-26 120.9 123 53.7
Gohir.D08G013600 Gossypium hirsutum HOM05D003791 ORTHO05D004961 9.0e-26 120.6 121 52.9
Nn2g13909 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.5e-25 119.8 121 52.1
MD11G1151700 Malus domestica HOM05D003791 ORTHO05D004961 2.0e-25 119.4 119 51.3
Haze_23510 Corylus avellana HOM05D003791 ORTHO05D004961 2.6e-25 119.0 120 51.7
Gohir.D09G087100 Gossypium hirsutum HOM05D003791 ORTHO05D004961 2.6e-25 119.0 123 52.8
COL.COLO4_19230 Corchorus olitorius HOM05D003791 ORTHO05D004961 3.4e-25 118.6 121 51.2
CSS0049530 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 4.5e-25 118.2 104 59.6
Lsat_1_v5_gn_6_42140 Lactuca sativa HOM05D003791 ORTHO05D004961 5.8e-25 117.9 113 55.8
Manes.11G154100 Manihot esculenta HOM05D003791 ORTHO05D004961 1.3e-24 116.7 118 53.4
Nitab4.5_0000173g0320 Nicotiana tabacum HOM05D003791 ORTHO05D004961 2.9e-24 115.5 90 60.0
Prupe.6G114800 Prunus persica HOM05D003791 ORTHO05D004961 2.9e-24 115.5 118 49.2
Gorai.004G007900 Gossypium raimondii HOM05D003791 ORTHO05D004961 4.9e-24 114.8 121 51.2
PGR102G1149 Punica granatum HOM05D003791 ORTHO05D004961 4.9e-24 114.8 123 51.2
Sabra09G0001100 Salix brachista HOM05D003791 ORTHO05D004961 4.9e-24 114.8 119 52.1
TWI79G0622 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 8.4e-24 114.0 120 47.5
AUR62024040 Chenopodium quinoa HOM05D003791 ORTHO05D004961 4.2e-23 111.7 118 50.0
AUR62040427 Chenopodium quinoa HOM05D003791 ORTHO05D019539 4.2e-23 111.7 118 50.0
Lalb_Chr22g0350471 Lupinus albus HOM05D003791 ORTHO05D004961 1.2e-22 110.2 121 48.8
EL10Ac9g20994 Beta vulgaris HOM05D003791 ORTHO05D004961 1.6e-22 109.8 120 49.2
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea HOM05D003791 ORTHO05D004961 2.7e-22 109.0 103 54.4
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea HOM05D003791 ORTHO05D004961 6.0e-22 107.8 103 53.4
SalBow3G1938 Salvia bowleyana HOM05D003791 ORTHO05D004961 6.0e-22 107.8 123 51.2
CDE09G0630 Ceratophyllum demersum HOM05D003791 ORTHO05D004961 2.3e-21 105.9 119 49.6
Migut.N02533 Erythranthe guttata HOM05D003791 ORTHO05D004961 3.0e-21 105.5 120 49.2
Os04g0195000 Oryza sativa ssp. japonica HOM05D003791 ORTHO05D004961 3.0e-21 105.5 114 46.5
Zm00001eb066510 Zea mays HOM05D003791 ORTHO05D004961 1.9e-20 102.8 122 42.6
Eucgr.B03911 Eucalyptus grandis HOM05D003791 ORTHO05D004961 7.4e-20 100.9 121 42.1
Ah.01g004870 Amaranthus hybridus HOM05D003791 ORTHO05D004961 9.7e-20 100.5 118 44.9
Thhalv10006697m.g Eutrema salsugineum HOM05D003791 ORTHO05D004961 8.2e-19 97.4 131 46.6
AT1G08190 Arabidopsis thaliana HOM05D003791 ORTHO05D004961 1.1e-18 97.1 133 44.4
Sp1g06840 Schrenkiella parvula HOM05D003791 ORTHO05D004961 1.1e-18 97.1 128 46.1
Aqoxy1G01033 Aquilegia oxysepala HOM05D003791 ORTHO05D004961 1.8e-18 96.3 119 45.4
SEGI_35272 Sequoiadendron giganteum HOM05D003791 ORTHO05D004961 2.4e-18 95.9 93 49.5
CARHR008020 Cardamine hirsuta HOM05D003791 ORTHO05D004961 1.2e-17 93.6 122 47.5
Ah.09g226470 Amaranthus hybridus HOM05D003791 ORTHO05D019539 2.6e-17 92.4 91 46.2
AL1G18600 Arabidopsis lyrata HOM05D003791 ORTHO05D004961 2.6e-17 92.4 129 45.0
SGA_v2.0_scaffold83G26445 Striga asiatica HOM05D003791 ORTHO05D004961 4.5e-17 91.7 94 52.1
PSO063G7392 Papaver somniferum HOM05D003791 ORTHO05D004961 5.9e-17 91.3 123 43.1
THA.LOC104800566 Tarenaya hassleriana HOM05D003791 ORTHO05D004961 5.9e-17 91.3 123 41.5
ATR0580G402 Amborella trichopoda HOM05D003791 ORTHO05D004961 1.0e-16 90.5 120 45.0
PSO339G5439 Papaver somniferum HOM05D003791 ORTHO05D004961 1.0e-16 90.5 123 43.1
unitig_22.g5654 Utricularia gibba HOM05D003791 ORTHO05D004961 1.3e-16 90.1 121 43.0
Ah.13g066400 Amaranthus hybridus HOM05D003791 ORTHO05D019539 3.8e-16 88.6 97 42.3
C05p06320 Brassica napus HOM05D003791 ORTHO05D004961 3.8e-16 88.6 125 43.2
Carub.0001s0755 Capsella rubella HOM05D003791 ORTHO05D004961 6.5e-16 87.8 126 40.5
A06p05250 Brassica napus HOM05D003791 ORTHO05D004961 8.5e-16 87.4 125 43.2
BraA06t23732Z Brassica rapa HOM05D003791 ORTHO05D004961 8.5e-16 87.4 125 43.2
BolC5t29388H Brassica oleracea HOM05D003791 ORTHO05D004961 1.1e-15 87.0 128 42.2
CSS0019611 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D019539 7.9e-14 80.9 122 43.4
AagrBONN_evm.TU.Sc2ySwM_368.1978 Anthoceros agrestis HOM05D003791 ORTHO05D004961 1.0e-13 80.5 135 38.5
arahy.Tifrunner.gnm1.ann1.BYIB55 Arachis hypogaea HOM05D003791 ORTHO05D004961 1.4e-13 80.1 122 41.0
arahy.Tifrunner.gnm1.ann1.EI6HBJ Arachis hypogaea HOM05D003791 ORTHO05D004961 1.4e-13 80.1 122 41.0
Pp3c15_14510 Physcomitrium patens HOM05D003791 ORTHO05D004961 1.8e-13 79.7 92 46.7
Aa31LG11G12710 Aethionema arabicum HOM05D003791 ORTHO05D004961 3.0e-13 79.0 120 37.5
Mapoly0052s0125 Marchantia polymorpha HOM05D003791 ORTHO05D004961 1.9e-12 76.3 106 37.7
FAN21G2323 Fragaria x ananassa HOM05D003791 ORTHO05D004961 4.3e-12 75.1 120 40.0
DCAR_015496 Daucus carota HOM05D003791 ORTHO05D004961 1.3e-11 73.6 116 39.7
SHI06192 Sapria himalayana HOM05D003791 ORTHO05D004961 5.3e-10 68.2 65 43.1
Ah.10g024760 Amaranthus hybridus HOM05D001024 ORTHO05D000878 2.2e-08 62.8 113 33.6
HanXRQChr15g0465621 Helianthus annuus HOM05D003791 ORTHO05D019539 3.8e-08 62.0 93 43.0


User provided reference genes

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