Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C1181T32 Lonicera japonica HOM05D007300 ORTHO05D009301 0.0e+00 1145.6 591 100.0
Dinv32299 Davidia involucrata HOM05D007300 ORTHO05D009301 4.7e-218 761.5 665 63.0
CSS0020184 Camellia sinensis var. sinensis HOM05D007300 ORTHO05D009301 1.2e-205 720.3 670 60.3
Actinidia19486 Actinidia chinensis HOM05D007300 ORTHO05D009301 6.0e-197 691.4 666 58.4
TAR627G1006 Trochodendron aralioides HOM05D007300 ORTHO05D009301 1.2e-194 683.7 631 57.7
GSVIVG01021378001 Vitis vinifera HOM05D007300 ORTHO05D009301 8.3e-191 671.0 673 56.2
QL05p060322 Quercus lobata HOM05D007300 ORTHO05D009301 6.0e-189 664.8 674 55.9
Cfa001024 Carpinus fangiana HOM05D007300 ORTHO05D009301 8.6e-188 661.0 675 57.6
Thecc.06G157700 Theobroma cacao HOM05D007300 ORTHO05D009301 8.6e-188 661.0 674 54.5
CiPaw.10G096200 Carya illinoinensis HOM05D007300 ORTHO05D009301 9.5e-187 657.5 665 56.5
Nitab4.5_0003714g0040 Nicotiana tabacum HOM05D007300 ORTHO05D009301 1.2e-186 657.1 655 54.8
Oeu021524.1 Olea europaea HOM05D007300 ORTHO05D009301 1.4e-185 653.7 599 57.4
Nitab4.5_0001283g0060 Nicotiana tabacum HOM05D007300 ORTHO05D009301 4.0e-185 652.1 655 54.8
Gorai.011G040700 Gossypium raimondii HOM05D007300 ORTHO05D009301 1.7e-183 646.7 678 55.0
Gohir.D10G038600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 4.9e-183 645.2 678 54.7
DCAR_027959 Daucus carota HOM05D007300 ORTHO05D009301 1.2e-181 640.6 586 58.9
Potri.001G353800 Populus trichocarpa HOM05D007300 ORTHO05D009301 1.2e-181 640.6 625 56.6
Gohir.A10G037600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 4.6e-181 638.6 676 54.3
MD05G1291800 Malus domestica HOM05D007300 ORTHO05D009301 1.3e-180 637.1 703 52.8
Prupe.4G073700 Prunus persica HOM05D007300 ORTHO05D009301 1.7e-180 636.7 676 53.8
Ciclev10014510m.g Citrus clementina HOM05D007300 ORTHO05D009301 2.1e-178 629.8 668 54.0
COL.COLO4_22798 Corchorus olitorius HOM05D007300 ORTHO05D009301 4.7e-178 628.6 674 54.2
PGSC0003DMG400003073 Solanum tuberosum HOM05D007300 ORTHO05D009301 1.1e-177 627.5 659 54.6
ECA236G2360 Erigeron canadensis HOM05D007300 ORTHO05D009301 3.1e-177 625.9 588 55.8
Peaxi162Scf00649g00027 Petunia axillaris HOM05D007300 ORTHO05D009301 4.0e-177 625.5 600 56.0
RcHm_v2.0_Chr5g0012901 Rosa chinensis HOM05D007300 ORTHO05D009301 1.2e-176 624.0 665 53.4
FvH4_3g06410 Fragaria vesca HOM05D007300 ORTHO05D009301 2.0e-176 623.2 658 54.0
Lsat_1_v5_gn_7_31040 Lactuca sativa HOM05D007300 ORTHO05D009301 2.0e-176 623.2 639 53.4
Sabra16G0232700 Salix brachista HOM05D007300 ORTHO05D009301 3.4e-176 622.5 704 52.4
HanXRQChr04g0119571 Helianthus annuus HOM05D007300 ORTHO05D009301 7.6e-176 621.3 604 56.3
TWI73G0852 Tripterygium wilfordii HOM05D007300 ORTHO05D009301 9.9e-176 620.9 679 51.7
Solyc02g071280.3 Solanum lycopersicum HOM05D007300 ORTHO05D009301 6.4e-175 618.2 669 53.7
CANSAT35G1474 Cannabis sativa HOM05D007300 ORTHO05D009301 1.9e-174 616.7 680 53.5
Sopen02g020340 Solanum pennellii HOM05D007300 ORTHO05D009301 1.9e-174 616.7 669 53.7
FAN21G2574 Fragaria x ananassa HOM05D007300 ORTHO05D009301 2.4e-174 616.3 658 53.6
Haze_05485 Corylus avellana HOM05D007300 ORTHO05D009301 6.6e-172 608.2 786 49.2
Cpa.g.sc17.110 Carica papaya HOM05D007300 ORTHO05D009301 1.5e-171 607.1 594 55.7
CAN.G257.51 Capsicum annuum HOM05D007300 ORTHO05D009301 2.5e-171 606.3 666 52.4
Manes.17G064900 Manihot esculenta HOM05D007300 ORTHO05D009301 3.6e-170 602.4 675 51.1
ClCG03G007190 Citrullus lanatus HOM05D007300 ORTHO05D009301 2.4e-169 599.7 673 51.7
FAN11G2841 Fragaria x ananassa HOM05D007300 ORTHO05D009301 3.1e-169 599.4 719 49.5
SalBow8G1735 Salvia bowleyana HOM05D007300 ORTHO05D009301 2.0e-168 596.7 631 52.8
Eucgr.D00343 Eucalyptus grandis HOM05D007300 ORTHO05D009301 1.1e-166 590.9 576 55.2
Lj4g0024386 Lotus japonicus HOM05D007300 ORTHO05D009301 9.3e-166 587.8 626 52.6
Glyma.05G164500 Glycine max HOM05D007300 ORTHO05D009301 1.2e-165 587.4 624 52.7
Migut.M00959 Erythranthe guttata HOM05D007300 ORTHO05D009301 1.6e-165 587.0 665 50.2
Atru.chr10.1398 Acer truncatum HOM05D007300 ORTHO05D009301 2.1e-165 586.6 558 58.2
Atru.chr10.1407 Acer truncatum HOM05D007300 ORTHO05D009301 6.6e-164 581.6 557 57.6
Glyma.08G121900 Glycine max HOM05D007300 ORTHO05D009301 8.7e-164 581.3 606 53.3
CsaV3_1G032780 Cucumis sativus L. HOM05D007300 ORTHO05D009301 1.1e-163 580.9 671 50.7
Aqoxy1G01857 Aquilegia oxysepala HOM05D007300 ORTHO05D009301 1.9e-163 580.1 673 49.8
MBI10_g02388_MAGBIO Magnolia biondii HOM05D007300 ORTHO05D009301 1.9e-163 580.1 663 49.5
Sc05g0006590 Simmondsia chinensis HOM05D007300 ORTHO05D009301 3.6e-162 575.9 678 48.5
Medtr8g088030 Medicago truncatula HOM05D007300 ORTHO05D009301 1.2e-160 570.9 617 50.9
Ca_17871_v3 Cicer arietinum L. HOM05D007300 ORTHO05D009301 4.9e-159 565.5 668 48.5
Lalb_Chr13g0295471 Lupinus albus HOM05D007300 ORTHO05D009301 2.4e-158 563.1 619 52.3
Duzib235G1110 Durio zibethinus HOM05D007300 ORTHO05D009301 1.2e-157 560.8 674 49.0
SGA_v2.0_scaffold1G00132 Striga asiatica HOM05D007300 ORTHO05D009301 1.6e-157 560.5 648 50.0
arahy.Tifrunner.gnm1.ann1.D64P8M Arachis hypogaea HOM05D007300 ORTHO05D009301 1.3e-156 557.4 645 49.9
Phvul.002G244500 Phaseolus vulgaris HOM05D007300 ORTHO05D009301 1.3e-156 557.4 619 50.2
PSO541G4163 Papaver somniferum HOM05D007300 ORTHO05D009301 3.0e-156 556.2 593 50.3
arahy.Tifrunner.gnm1.ann1.FQ35JE Arachis hypogaea HOM05D007300 ORTHO05D009301 1.1e-155 554.3 657 49.0
THA.LOC104827733 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 3.7e-154 549.3 674 48.7
Nn3g20905 Nelumbo nucifera HOM05D007300 ORTHO05D009301 6.2e-154 548.5 619 51.5
TPR.G6793 Trifolium pratense HOM05D007300 ORTHO05D009301 2.4e-153 546.6 618 49.4
Thhalv10000812m.g Eutrema salsugineum HOM05D007300 ORTHO05D009301 3.1e-153 546.2 671 47.4
PGR044G1273 Punica granatum HOM05D007300 ORTHO05D009301 6.5e-151 538.5 528 54.4
AT5G46420 Arabidopsis thaliana HOM05D007300 ORTHO05D009301 4.2e-150 535.8 605 49.4
Sp2g11270 Schrenkiella parvula HOM05D007300 ORTHO05D009301 4.2e-150 535.8 603 48.9
Carub.0008s0147 Capsella rubella HOM05D007300 ORTHO05D009301 7.1e-150 535.0 605 49.1
A06p45940 Brassica napus HOM05D007300 ORTHO05D009301 4.6e-149 532.3 603 48.6
BolC7t43517H Brassica oleracea HOM05D007300 ORTHO05D009301 1.3e-148 530.8 599 49.1
VMungo0251G3397 Vigna mungo HOM05D007300 ORTHO05D009301 2.3e-148 530.0 563 53.6
AUR62027555 Chenopodium quinoa HOM05D007300 ORTHO05D009301 6.7e-148 528.5 602 47.3
CARHR175340 Cardamine hirsuta HOM05D007300 ORTHO05D009301 2.5e-147 526.6 604 48.3
C07p29650 Brassica napus HOM05D007300 ORTHO05D009301 5.7e-147 525.4 666 46.4
Aa31LG9G6430 Aethionema arabicum HOM05D007300 ORTHO05D009301 7.4e-147 525.0 680 45.3
AL8G11990 Arabidopsis lyrata HOM05D007300 ORTHO05D009301 1.6e-146 523.9 605 48.3
Psat7g066760 Pisum sativum HOM05D007300 ORTHO05D009301 1.4e-145 520.8 639 45.7
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 1.5e-144 517.3 655 45.8
AUR62035801 Chenopodium quinoa HOM05D007300 ORTHO05D009301 3.2e-142 509.6 602 46.0
HPP92_023296 Vanilla planifolia HOM05D007300 ORTHO05D009301 2.2e-127 460.3 592 43.6
FAN16G1565 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.6e-125 454.1 470 54.7
EL10Ac8g19794 Beta vulgaris HOM05D007300 ORTHO05D009301 2.0e-120 437.2 678 40.1
ATR1153G036 Amborella trichopoda HOM05D007300 ORTHO05D009301 2.2e-119 433.7 674 40.4
unitig_92.g28150 Utricularia gibba HOM05D007300 ORTHO05D009301 2.7e-109 400.2 524 44.7
PSO675G3105 Papaver somniferum HOM05D007300 ORTHO05D009301 1.4e-100 371.3 320 59.4
Sed0024786 Sechium edule HOM05D007300 ORTHO05D009301 2.6e-99 367.1 380 56.1
SEGI_38698 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 8.6e-87 325.5 658 30.5
HPP92_023271 Vanilla planifolia HOM05D007300 ORTHO05D009301 5.2e-84 316.2 589 34.6
Zm00001eb296050 Zea mays HOM05D007300 ORTHO05D009301 4.4e-75 286.6 304 48.0
CDE06G2820 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 1.9e-70 271.2 350 45.4
MELO3C002704.2 Cucumis melo HOM05D007300 ORTHO05D009301 2.8e-69 267.3 355 43.9
Mapoly0019s0078 Marchantia polymorpha HOM05D007300 ORTHO05D009301 6.8e-68 262.7 733 27.6
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 1.9e-65 254.6 527 31.7
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 3.4e-59 233.8 527 32.4
Os05g0566300 Oryza sativa ssp. japonica HOM05D007300 ORTHO05D009301 4.6e-56 223.4 210 52.9
Zm00001eb349440 Zea mays HOM05D007300 ORTHO05D009301 8.4e-42 176.0 176 48.9
Gohir.D08G088700 Gossypium hirsutum HOM05D007300 ORTHO05D009301 4.5e-35 153.7 170 51.8
Gorai.004G093400 Gossypium raimondii HOM05D007300 ORTHO05D009301 4.5e-35 153.7 192 47.9
SEGI_17563 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 2.3e-31 141.4 122 54.1
MCO05G669 Micromonas commoda HOM05D007300 ORTHO05D009301 2.7e-24 117.9 229 33.2
CDE06G1765 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 1.6e-21 108.6 155 38.7
Cre03.g191950 Chlamydomonas reinhardtii HOM05D007300 ORTHO05D009301 4.2e-17 94.0 213 30.5
Zm00001eb184690 Zea mays HOM05D007300 ORTHO05D009301 6.1e-16 90.1 83 48.2
Duzib248G0257 Durio zibethinus HOM05D003927 ORTHO05D004905 4.4e-06 57.4 136 27.2


User provided reference genes

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