Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18979 Selenicereus undatus HOM05D003161 ORTHO05D005173 2.6e-147 525.4 277 100.0
Hund19218 Selenicereus undatus HOM05D003161 ORTHO05D005173 2.5e-97 359.4 305 66.2
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 7.6e-94 347.8 305 64.3
Hund18983 Selenicereus undatus HOM05D003161 ORTHO05D005173 1.9e-73 280.0 271 59.8
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 2.5e-68 263.1 321 50.5
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 5.3e-63 245.4 319 47.3
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 4.5e-62 242.3 310 48.7
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 2.9e-61 239.6 324 46.9
AUR62041563 Chenopodium quinoa HOM05D003161 ORTHO05D005173 1.1e-55 221.1 292 48.3
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 5.9e-54 215.3 297 43.8
PGSC0003DMG400008644 Solanum tuberosum HOM05D003161 ORTHO05D005173 1.0e-53 214.5 305 43.0
vmacro09128 Vaccinium macrocarpon HOM05D003161 ORTHO05D005173 1.0e-53 214.5 296 45.6
Cpa.g.sc85.20 Carica papaya HOM05D003161 ORTHO05D005173 1.7e-53 213.8 295 46.4
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 2.9e-53 213.0 316 43.4
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 2.9e-53 213.0 319 44.2
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 5.0e-53 212.2 306 43.1
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 6.5e-53 211.8 302 43.7
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 6.5e-53 211.8 324 41.0
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 8.5e-53 211.5 290 44.8
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 8.5e-53 211.5 306 45.1
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 1.1e-52 211.1 318 43.4
QL07p025530 Quercus lobata HOM05D003161 ORTHO05D005173 1.4e-52 210.7 309 44.7
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 1.9e-52 210.3 292 43.5
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 1.9e-52 210.3 297 43.4
CSS0042321 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 9.4e-52 208.0 297 44.1
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 1.2e-51 207.6 312 42.3
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 3.6e-51 206.1 320 42.2
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 4.6e-51 205.7 294 43.9
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 4.6e-51 205.7 314 41.7
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 6.1e-51 205.3 294 43.9
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 1.4e-50 204.1 294 42.5
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 1.4e-50 204.1 295 42.4
Sabra16G0064600 Salix brachista HOM05D003161 ORTHO05D005173 1.4e-50 204.1 298 42.6
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 1.8e-50 203.8 322 42.2
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 2.3e-50 203.4 317 42.9
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 2.3e-50 203.4 315 44.4
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 5.1e-50 202.2 314 41.7
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 6.7e-50 201.8 306 43.1
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 2.0e-49 200.3 288 46.2
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 2.0e-49 200.3 287 47.0
BcaC05g29306 Brassica carinata HOM05D003161 ORTHO05D005173 2.6e-49 199.9 303 42.6
ClCG04G001230 Citrullus lanatus HOM05D003161 ORTHO05D005173 2.6e-49 199.9 313 44.1
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 3.3e-49 199.5 317 41.6
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 3.3e-49 199.5 299 45.2
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 4.3e-49 199.1 318 40.9
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 5.7e-49 198.7 312 42.9
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 5.7e-49 198.7 286 43.0
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 5.7e-49 198.7 294 45.9
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 5.7e-49 198.7 295 43.1
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 9.7e-49 198.0 309 41.1
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 1.3e-48 197.6 290 43.8
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 1.7e-48 197.2 296 43.6
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 2.8e-48 196.4 286 46.2
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 3.7e-48 196.1 293 45.1
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 4.8e-48 195.7 286 45.5
Nitab4.5_0000571g0110 Nicotiana tabacum HOM05D003161 ORTHO05D005173 6.3e-48 195.3 294 45.2
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 8.2e-48 194.9 275 42.9
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 8.2e-48 194.9 291 44.3
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 8.2e-48 194.9 327 41.6
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 1.1e-47 194.5 309 44.7
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 3.1e-47 193.0 211 51.2
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 4.1e-47 192.6 289 41.5
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 5.3e-47 192.2 286 45.5
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 6.9e-47 191.8 314 41.1
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 9.1e-47 191.4 295 45.4
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 9.1e-47 191.4 295 45.4
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 9.1e-47 191.4 287 44.3
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 2.0e-46 190.3 309 44.3
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 3.4e-46 189.5 287 45.3
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 3.4e-46 189.5 307 40.4
CiPaw.08G134600 Carya illinoinensis HOM05D003161 ORTHO05D005173 5.9e-46 188.7 298 40.3
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 5.9e-46 188.7 318 39.6
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 7.7e-46 188.3 292 42.8
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 7.7e-46 188.3 309 40.1
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 1.3e-45 187.6 309 43.7
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 1.3e-45 187.6 309 43.7
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 1.3e-45 187.6 315 43.2
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 1.3e-45 187.6 310 43.2
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 1.7e-45 187.2 316 38.9
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 2.2e-45 186.8 274 42.0
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 3.8e-45 186.0 297 43.4
CAN.G1433.27 Capsicum annuum HOM05D003161 ORTHO05D005173 1.4e-44 184.1 260 43.8
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 1.9e-44 183.7 297 42.4
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 2.5e-44 183.3 310 43.2
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 7.2e-44 181.8 311 40.2
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 1.2e-43 181.0 293 40.3
TWI74G1605 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 1.2e-43 181.0 296 41.2
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 2.7e-43 179.9 296 41.9
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 4.7e-43 179.1 315 38.7
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 7.9e-43 178.3 284 45.8
Os07g0203300 Oryza sativa ssp. japonica HOM05D003161 ORTHO05D005173 2.3e-42 176.8 292 42.1
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 3.0e-42 176.4 284 41.9
TWI74G0321 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 8.8e-42 174.9 278 41.0
PSO210G4351 Papaver somniferum HOM05D003161 ORTHO05D005173 1.1e-41 174.5 316 38.6
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 1.1e-41 174.5 307 40.7
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 9.7e-41 171.4 293 38.6
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.7e-40 170.6 293 38.6
SEGI_01045 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 1.7e-40 170.6 304 38.5
HPP92_027318 Vanilla planifolia HOM05D003161 ORTHO05D005173 1.7e-40 170.6 294 39.8
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 1.7e-40 170.6 320 38.4
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 2.2e-40 170.2 297 38.7
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 3.7e-40 169.5 293 38.9
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 3.7e-40 169.5 293 38.9
BcaB06g25562 Brassica carinata HOM05D003161 ORTHO05D005173 4.8e-40 169.1 132 60.6
CAN.G317.8 Capsicum annuum HOM05D003161 ORTHO05D005173 4.8e-40 169.1 129 62.0
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.8e-40 169.1 297 38.4
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 8.2e-40 168.3 302 40.1
CDE02G2929 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 1.8e-39 167.2 297 39.1
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 1.2e-38 164.5 298 37.2
CSS0008153 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 5.9e-38 162.2 280 38.9
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 1.0e-37 161.4 316 38.0
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 2.5e-36 156.8 299 38.8
SHI30029 Sapria himalayana HOM05D003161 ORTHO05D005173 4.2e-36 156.0 132 59.8
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 3.6e-35 152.9 267 41.2
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 1.8e-34 150.6 282 36.9
SMO137G0021 Selaginella moellendorffii HOM05D003161 ORTHO05D005173 1.2e-33 147.9 207 39.6
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 4.4e-33 146.0 263 39.5
Aqoxy4G00694 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 5.3e-31 139.0 261 38.7
CBR_g22381 Chara braunii HOM05D003161 ORTHO05D005173 1.1e-28 131.3 244 35.2
MD14G1049800 Malus domestica HOM05D003161 ORTHO05D005173 5.5e-28 129.0 184 44.0
Zm00001eb302870 Zea mays HOM05D003161 ORTHO05D005173 1.4e-26 124.4 204 39.7
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 2.3e-26 123.6 288 34.7
Cre10.g428750 Chlamydomonas reinhardtii HOM05D003161 ORTHO05D005173 1.1e-20 104.8 207 32.9
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 1.6e-19 100.9 228 36.0
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 1.4e-18 97.8 236 32.6
Actinidia30948 Actinidia chinensis HOM05D003161 ORTHO05D005173 2.8e-11 73.6 85 47.1
Cfa023914 Carpinus fangiana HOM05D003161 ORTHO05D005173 3.6e-11 73.2 237 24.9
PRCOL_00005658 Prasinoderma coloniale HOM05D003161 ORTHO05D005173 3.0e-10 70.1 144 30.6
Actinidia38606 Actinidia chinensis HOM05D003161 ORTHO05D005173 2.4e-07 60.5 87 41.4


User provided reference genes

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