Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.4e-262 909.1 452 100.0
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-127 460.3 582 50.3
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-126 457.6 485 55.5
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-126 457.6 485 55.5
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-126 457.6 485 55.5
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-126 457.6 485 55.5
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-126 457.6 485 55.5
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-126 457.6 485 55.5
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-126 457.6 485 55.5
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-126 457.6 485 55.5
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-126 457.6 485 55.5
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.9e-126 456.8 437 59.5
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.5e-119 431.8 471 54.6
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.3e-114 417.5 491 50.9
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.9e-104 382.1 416 55.3
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 2.1e-101 373.6 498 47.0
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.4e-100 370.9 520 44.8
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.0e-100 369.8 520 44.6
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.7e-98 364.0 520 44.2
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 1.4e-97 360.9 500 45.4
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.6e-91 340.1 520 43.1
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 2.6e-91 340.1 518 43.2
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.1e-89 334.7 518 41.9
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 1.4e-89 334.3 524 42.4
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 3.1e-89 333.2 520 42.9
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 7.0e-89 332.0 521 43.4
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 2.7e-88 330.1 521 43.2
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 2.7e-88 330.1 521 43.2
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.7e-88 330.1 521 43.2
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.5e-88 329.3 413 49.2
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.5e-88 329.3 413 49.2
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.5e-88 329.3 413 49.2
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.5e-88 329.3 413 49.2
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.7e-87 327.4 506 43.1
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 2.9e-87 326.6 528 41.5
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 6.6e-87 325.5 521 41.8
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 2.5e-86 323.6 502 42.4
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 2.3e-84 317.0 499 41.9
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 3.4e-83 313.2 357 52.1
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 4.4e-83 312.8 519 41.0
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 4.4e-83 312.8 519 41.0
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 1.7e-82 310.8 520 40.2
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 4.6e-80 302.8 520 41.0
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 4.9e-74 282.7 413 45.0
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-70 271.2 280 56.1
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 2.1e-69 267.3 458 40.0
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 3.6e-69 266.5 512 37.7
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 4.7e-69 266.2 458 39.7
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 4.7e-69 266.2 458 39.7
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 4.7e-69 266.2 458 39.7
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 6.2e-69 265.8 468 39.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.8e-68 264.2 513 37.4
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.0e-67 260.8 372 44.9
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.0e-67 260.8 372 44.9
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.4e-67 259.6 342 47.1
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 2.7e-64 250.4 275 51.3
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 3.9e-63 246.5 279 50.9
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 3.9e-63 246.5 409 40.6
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 8.6e-63 245.4 275 50.5
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 2.5e-62 243.8 438 40.9
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 1.2e-61 241.5 396 40.2
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 3.6e-61 240.0 274 51.1
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 9.9e-59 231.9 493 35.3
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 3.5e-56 223.4 340 42.9
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.6e-55 219.2 143 78.3
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 2.8e-53 213.8 144 75.0
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.4e-52 211.5 200 59.0
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 5.3e-52 209.5 164 67.1
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 1.2e-51 208.4 164 67.1
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 1.2e-51 208.4 312 40.7
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 2.0e-51 207.6 164 66.5
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-51 207.6 180 62.2
Sc07g0006590 Simmondsia chinensis HOM05D000216 ORTHO05D000634 1.3e-50 204.9 142 73.2
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 3.8e-50 203.4 164 65.9
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 3.8e-50 203.4 162 64.2
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 3.8e-50 203.4 163 63.8
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 6.4e-50 202.6 164 64.0
Manes.01G046800 Manihot esculenta HOM05D000216 ORTHO05D000634 1.1e-49 201.8 170 62.4
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 1.1e-49 201.8 143 70.6
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 3.2e-49 200.3 402 36.1
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 1.6e-48 198.0 164 63.4
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 1.0e-47 195.3 169 60.9
Psat2g044360 Pisum sativum HOM05D000216 ORTHO05D000634 2.5e-46 190.7 165 61.8
CAN.G213.14 Capsicum annuum HOM05D000216 ORTHO05D000634 1.1e-44 185.3 142 67.6
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 6.9e-44 182.6 372 36.0
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 4.9e-42 176.4 143 65.7
MSTRG.17791 Avicennia marina HOM05D000216 ORTHO05D000634 3.2e-41 173.7 293 38.6
EL10Ac3g05558 Beta vulgaris HOM05D000216 ORTHO05D000634 1.5e-38 164.9 142 62.0
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 1.9e-38 164.5 169 55.6
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 9.6e-38 162.2 166 56.6
AUR62030170 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.6e-37 161.4 129 67.4
Nitab4.5_0001761g0220 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.6e-37 161.4 207 49.3
arahy.Tifrunner.gnm1.ann1.8W122S Arachis hypogaea HOM05D000216 ORTHO05D000634 2.1e-37 161.0 272 39.7
CAN.G939.13 Capsicum annuum HOM05D000216 ORTHO05D000634 4.8e-37 159.8 114 71.1
AUR62021208 Chenopodium quinoa HOM05D000216 ORTHO05D000634 3.1e-36 157.1 125 67.2
Glyma.02G221400 Glycine max HOM05D000216 ORTHO05D000634 2.9e-34 150.6 125 60.8
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 3.8e-34 150.2 240 42.9
Lsat_1_v5_gn_3_118000 Lactuca sativa HOM05D000216 ORTHO05D000634 3.8e-34 150.2 107 70.1
Gohir.D13G016950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 6.4e-34 149.4 239 41.0
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 1.4e-33 148.3 107 71.0
Gohir.D12G094332 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.5e-32 143.7 143 54.5
Migut.D01340 Erythranthe guttata HOM05D000216 ORTHO05D000634 3.0e-31 140.6 131 59.5
Gorai.013G017900 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.9e-31 140.2 90 78.9
Gorai.013G018800 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.9e-31 140.2 265 36.6
Oeu012802.1 Olea europaea HOM05D000216 ORTHO05D000634 8.7e-31 139.0 92 75.0
HanXRQChr00c0988g0578131 Helianthus annuus HOM05D000216 ORTHO05D000634 2.5e-30 137.5 104 65.4
Gorai.008G102500 Gossypium raimondii HOM05D000216 ORTHO05D000634 7.4e-30 136.0 164 47.6
Medtr5g098620 Medicago truncatula HOM05D000216 ORTHO05D000634 1.8e-28 131.3 143 51.7
Gohir.D01G206650 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.4e-28 131.0 143 51.7
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.0e-28 130.2 126 54.8
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 5.3e-28 129.8 103 63.1
Gohir.D03G089666 Gossypium hirsutum HOM05D000216 ORTHO05D000634 4.5e-27 126.7 95 66.3
QL93p0837_0001 Quercus lobata HOM05D000216 ORTHO05D000634 6.5e-26 122.9 80 76.2
HanXRQChr00c0313g0573461 Helianthus annuus HOM05D000216 ORTHO05D000634 1.1e-25 122.1 101 64.4
Gorai.003G071700 Gossypium raimondii HOM05D000216 ORTHO05D000634 4.2e-25 120.2 95 62.1
Gohir.A05G086066 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.5e-25 119.8 101 63.4
Lj1g0027665 Lotus japonicus HOM05D000216 ORTHO05D000634 1.2e-24 118.6 101 59.4
Hund04025 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-24 117.1 84 71.4
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.0e-23 114.0 294 32.3
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.9e-23 113.6 110 57.3
Migut.F01072 Erythranthe guttata HOM05D000216 ORTHO05D000634 8.7e-23 112.5 96 61.5
HanXRQChr14g0454991 Helianthus annuus HOM05D000216 ORTHO05D000634 3.3e-22 110.5 143 46.2
HanXRQChr00c0313g0573471 Helianthus annuus HOM05D000216 ORTHO05D000634 9.7e-22 109.0 140 49.3
Sc11g0005800 Simmondsia chinensis HOM05D000216 ORTHO05D000634 9.7e-22 109.0 101 59.4
AUR62041877 Chenopodium quinoa HOM05D000216 ORTHO05D000634 2.8e-21 107.5 72 76.4
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 6.3e-21 106.3 286 31.1
CAN.G511.9 Capsicum annuum HOM05D000216 ORTHO05D000634 3.1e-20 104.0 77 66.2
Atru.chr6.1615 Acer truncatum HOM05D000216 ORTHO05D000634 6.9e-20 102.8 71 67.6
Gohir.A07G183950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 6.9e-20 102.8 234 33.3
Migut.D01414 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.0e-19 101.3 81 66.7
BraSC140t45608Z Brassica rapa HOM05D000216 ORTHO05D000634 1.0e-18 99.0 145 44.8
Migut.K00966 Erythranthe guttata HOM05D000216 ORTHO05D000634 3.8e-18 97.1 182 34.6
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 5.0e-18 96.7 143 39.2
Lalb_Chr13g0292901 Lupinus albus HOM05D000216 ORTHO05D000634 8.5e-18 95.9 73 63.0
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 7.2e-17 92.8 116 47.4
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 9.4e-17 92.4 247 30.8
Lalb_Chr06g0173101 Lupinus albus HOM05D000216 ORTHO05D000634 2.7e-16 90.9 70 62.9
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 5.1e-15 86.7 94 51.1
MELO3C000330.2 Cucumis melo HOM05D000216 ORTHO05D000634 4.3e-14 83.6 113 45.1
Lalb_Chr06g0173011 Lupinus albus HOM05D000216 ORTHO05D000634 4.3e-14 83.6 73 60.3
SEGI_15522 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 5.7e-14 83.2 100 44.0
TPR.G26480 Trifolium pratense HOM05D000216 ORTHO05D000634 7.4e-14 82.8 65 60.0
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 6.3e-13 79.7 231 30.7
Solyc12g062650.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.3e-13 79.7 80 53.8
Zm00001eb434960 Zea mays HOM05D000216 ORTHO05D000634 8.2e-13 79.3 134 38.1
Gorai.011G135800 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.4e-12 78.6 69 62.3
HanXRQChr07g0188321 Helianthus annuus HOM05D000216 ORTHO05D000634 1.4e-12 78.6 54 66.7
Solyc08g028910.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.1e-12 77.4 59 62.7
BraSC143t45681Z Brassica rapa HOM05D000216 ORTHO05D000634 4.1e-12 77.0 110 43.6
Solyc07g021290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.3e-12 76.6 54 72.2
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 6.9e-12 76.3 59 62.7
Nitab4.5_0016036g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 9.1e-12 75.9 61 65.6
Gohir.D10G123250 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.2e-11 75.5 63 61.9
Pp3c7_4990 Physcomitrium patens HOM05D000216 ORTHO05D000634 4.5e-11 73.6 70 44.3
Nitab4.5_0004184g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 5.9e-11 73.2 81 51.9
HanXRQChr00c0823g0577631 Helianthus annuus HOM05D000216 ORTHO05D000634 2.2e-10 71.2 48 66.7
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 8.5e-10 69.3 122 38.5
CARHR056720 Cardamine hirsuta HOM05D000216 ORTHO05D000634 4.2e-09 67.0 64 54.7
MELO3C001268.2 Cucumis melo HOM05D000216 ORTHO05D000634 7.2e-09 66.2 60 58.3
MELO3C028015.2 Cucumis melo HOM05D000216 ORTHO05D000634 7.2e-09 66.2 60 58.3
Zm00001eb226410 Zea mays HOM05D000216 ORTHO05D000634 1.2e-08 65.5 113 38.1
arahy.Tifrunner.gnm1.ann1.EI2YTD Arachis hypogaea HOM05D000890 ORTHO05D000697 2.7e-08 64.3 129 39.5
Oeu010681.1 Olea europaea HOM05D000216 ORTHO05D000634 2.7e-08 64.3 142 38.0
MELO3C028016.2 Cucumis melo HOM05D000216 ORTHO05D000634 1.4e-07 62.0 60 56.7
HanXRQChr14g0455001 Helianthus annuus HOM05D000216 ORTHO05D000634 3.0e-07 60.8 142 33.8
Gorai.002G075300 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.1e-06 58.9 37 70.3
Solyc04g018250.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-06 58.2 67 49.3
Potri.019G027720 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.6e-06 57.8 120 32.5
Solyc08g028920.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.6e-06 57.8 76 43.4
HPP92_016025 Vanilla planifolia HOM05D000216 ORTHO05D000634 2.6e-06 57.8 48 60.4


User provided reference genes

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