Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07854 Selenicereus undatus HOM05D001366 ORTHO05D005449 1.2e-86 323.2 162 100.0
EL10Ac9g20840 Beta vulgaris HOM05D001366 ORTHO05D005449 1.3e-50 203.4 107 95.3
EL10Ac8g20405 Beta vulgaris HOM05D001366 ORTHO05D005449 2.3e-50 202.6 107 93.5
Aa31LG4G9540 Aethionema arabicum HOM05D001366 ORTHO05D005449 3.9e-50 201.8 107 95.3
Carub.0007s1663 Capsella rubella HOM05D001366 ORTHO05D005449 3.9e-50 201.8 107 95.3
AL7G28780 Arabidopsis lyrata HOM05D001366 ORTHO05D005449 8.7e-50 200.7 107 94.4
AT4G24440 Arabidopsis thaliana HOM05D001366 ORTHO05D005449 8.7e-50 200.7 107 94.4
C01p19760 Brassica napus HOM05D001366 ORTHO05D003220 8.7e-50 200.7 107 93.5
BolC1t01904H Brassica oleracea HOM05D001366 ORTHO05D003220 8.7e-50 200.7 107 93.5
Thhalv10026637m.g Eutrema salsugineum HOM05D001366 ORTHO05D005449 8.7e-50 200.7 107 94.4
Sp7g22400 Schrenkiella parvula HOM05D001366 ORTHO05D005449 8.7e-50 200.7 107 94.4
BcaC06g32884 Brassica carinata HOM05D001366 ORTHO05D005449 1.1e-49 200.3 107 94.4
A03p55290 Brassica napus HOM05D001366 ORTHO05D005449 1.1e-49 200.3 108 92.6
BolC7t45851H Brassica oleracea HOM05D001366 ORTHO05D005449 1.1e-49 200.3 107 94.4
BraA03t14588Z Brassica rapa HOM05D001366 ORTHO05D005449 1.1e-49 200.3 108 92.6
Lalb_Chr08g0242611 Lupinus albus HOM05D001366 ORTHO05D005449 1.5e-49 199.9 107 92.5
THA.LOC104815469 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 1.5e-49 199.9 107 94.4
GSVIVG01009213001 Vitis vinifera HOM05D001366 ORTHO05D005449 1.9e-49 199.5 135 80.0
BcaC09g50868 Brassica carinata HOM05D001366 ORTHO05D003220 2.5e-49 199.1 106 93.4
BcaNung05637 Brassica carinata HOM05D001366 ORTHO05D005449 2.5e-49 199.1 107 93.5
C07p53590 Brassica napus HOM05D001366 ORTHO05D005449 2.5e-49 199.1 107 93.5
Manes.18G057000 Manihot esculenta HOM05D001366 ORTHO05D005449 2.5e-49 199.1 107 93.5
THA.LOC104799853 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 2.5e-49 199.1 107 93.5
A01p15810 Brassica napus HOM05D001366 ORTHO05D003220 3.3e-49 198.7 106 93.4
Lalb_Chr11g0064851 Lupinus albus HOM05D001366 ORTHO05D005449 3.3e-49 198.7 107 91.6
A08p21460 Brassica napus HOM05D001366 ORTHO05D005449 4.3e-49 198.4 107 93.5
BolC8t48576H Brassica oleracea HOM05D001366 ORTHO05D005449 4.3e-49 198.4 107 93.5
BraA08t34095Z Brassica rapa HOM05D001366 ORTHO05D005449 4.3e-49 198.4 107 93.5
CARHR231830 Cardamine hirsuta HOM05D001366 ORTHO05D005449 4.3e-49 198.4 107 92.5
Nitab4.5_0000885g0060 Nicotiana tabacum HOM05D001366 ORTHO05D005449 4.3e-49 198.4 107 92.5
Peaxi162Scf00160g00913 Petunia axillaris HOM05D001366 ORTHO05D005449 4.3e-49 198.4 107 92.5
CANSAT25G2801 Cannabis sativa HOM05D001366 ORTHO05D005449 5.7e-49 198.0 107 90.7
Cpa.g.sc21.43 Carica papaya HOM05D001366 ORTHO05D005449 7.4e-49 197.6 107 91.6
CiPaw.08G057200 Carya illinoinensis HOM05D001366 ORTHO05D005449 7.4e-49 197.6 107 90.7
BraA01t01516Z Brassica rapa HOM05D001366 ORTHO05D003220 9.7e-49 197.2 105 93.3
PSO013G0324 Papaver somniferum HOM05D001366 ORTHO05D005449 9.7e-49 197.2 107 89.7
Glyma.02G216100 Glycine max HOM05D001366 ORTHO05D005449 1.3e-48 196.8 107 91.6
Nn1g05642 Nelumbo nucifera HOM05D001366 ORTHO05D005449 1.3e-48 196.8 107 90.7
PSO832G3977 Papaver somniferum HOM05D001366 ORTHO05D005449 1.3e-48 196.8 107 88.8
Phvul.008G183300 Phaseolus vulgaris HOM05D001366 ORTHO05D005449 1.3e-48 196.8 107 91.6
CiPaw.07G162800 Carya illinoinensis HOM05D001366 ORTHO05D005449 1.6e-48 196.4 107 90.7
TAR625G0060 Trochodendron aralioides HOM05D001366 ORTHO05D005449 1.6e-48 196.4 107 91.6
Aqoxy2G03242 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 2.2e-48 196.1 107 88.8
LjContig00408g0006754 Lotus japonicus HOM05D001366 ORTHO05D005449 2.2e-48 196.1 107 91.6
arahy.Tifrunner.gnm1.ann1.CRNC3Y Arachis hypogaea HOM05D001366 ORTHO05D005449 2.8e-48 195.7 108 88.9
PSO761G0276 Papaver somniferum HOM05D001366 ORTHO05D005449 2.8e-48 195.7 107 88.8
Cc10_g08370 Coffea canephora HOM05D001366 ORTHO05D005449 3.7e-48 195.3 107 91.6
FvH4_5g34180 Fragaria vesca HOM05D001366 ORTHO05D005449 3.7e-48 195.3 107 90.7
FAN18G2982 Fragaria x ananassa HOM05D001366 ORTHO05D005449 3.7e-48 195.3 107 90.7
Nitab4.5_0000354g0080 Nicotiana tabacum HOM05D001366 ORTHO05D005449 3.7e-48 195.3 107 91.6
Glyma.14G183100 Glycine max HOM05D001366 ORTHO05D005449 6.3e-48 194.5 107 91.6
Prupe.1G536300 Prunus persica HOM05D001366 ORTHO05D005449 6.3e-48 194.5 107 90.7
Actinidia29656 Actinidia chinensis HOM05D001366 ORTHO05D005449 8.2e-48 194.1 107 88.8
arahy.Tifrunner.gnm1.ann1.8785AP Arachis hypogaea HOM05D001366 ORTHO05D005449 8.2e-48 194.1 107 88.8
Ciclev10002917m.g Citrus clementina HOM05D001366 ORTHO05D005449 8.2e-48 194.1 107 90.7
Atru.chr11.619 Acer truncatum HOM05D001366 ORTHO05D005449 1.1e-47 193.7 107 88.8
Medtr7g005540 Medicago truncatula HOM05D001366 ORTHO05D005449 1.1e-47 193.7 107 89.7
PSO700G0345 Papaver somniferum HOM05D001366 ORTHO05D005449 1.1e-47 193.7 107 87.9
Gorai.009G278800 Gossypium raimondii HOM05D001366 ORTHO05D005449 1.4e-47 193.4 107 90.7
Lalb_Chr23g0269931 Lupinus albus HOM05D001366 ORTHO05D005449 1.4e-47 193.4 107 89.7
RcHm_v2.0_Chr7g0233761 Rosa chinensis HOM05D001366 ORTHO05D005449 1.4e-47 193.4 107 89.7
arahy.Tifrunner.gnm1.ann1.HU70H8 Arachis hypogaea HOM05D001366 ORTHO05D005449 1.8e-47 193.0 107 87.9
arahy.Tifrunner.gnm1.ann1.T41BVH Arachis hypogaea HOM05D001366 ORTHO05D005449 1.8e-47 193.0 124 79.8
CSS0026904 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 1.8e-47 193.0 107 89.7
ClCG11G014700 Citrullus lanatus HOM05D001366 ORTHO05D005449 1.8e-47 193.0 107 88.8
CsaV3_2G033370 Cucumis sativus L. HOM05D001366 ORTHO05D005449 1.8e-47 193.0 107 87.9
Sed0016266 Sechium edule HOM05D001366 ORTHO05D005449 1.8e-47 193.0 107 88.8
PGSC0003DMG400002052 Solanum tuberosum HOM05D001366 ORTHO05D005449 1.8e-47 193.0 107 89.7
Atru.chr13.973 Acer truncatum HOM05D001366 ORTHO05D005449 2.4e-47 192.6 107 87.9
COL.COLO4_35286 Corchorus olitorius HOM05D001366 ORTHO05D005449 2.4e-47 192.6 107 89.7
FAN04G2369 Fragaria x ananassa HOM05D001366 ORTHO05D005449 2.4e-47 192.6 107 88.8
Hma1.2p1_0125F.1_g058680 Hydrangea macrophylla HOM05D001366 ORTHO05D005449 2.4e-47 192.6 107 89.7
Psat2g064960 Pisum sativum HOM05D001366 ORTHO05D005449 2.4e-47 192.6 107 89.7
Aqoxy6G00666 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 3.1e-47 192.2 107 87.9
Ah.01g003970 Amaranthus hybridus HOM05D001366 ORTHO05D005449 4.1e-47 191.8 107 89.7
CAN.G1104.8 Capsicum annuum HOM05D001366 ORTHO05D005449 4.1e-47 191.8 107 88.8
Potri.005G151700 Populus trichocarpa HOM05D001366 ORTHO05D005449 4.1e-47 191.8 107 87.9
PGR042G3224 Punica granatum HOM05D001366 ORTHO05D005449 4.1e-47 191.8 107 88.8
Solyc12g088030.2 Solanum lycopersicum HOM05D001366 ORTHO05D005449 4.1e-47 191.8 107 88.8
Sopen12g030060 Solanum pennellii HOM05D001366 ORTHO05D005449 4.1e-47 191.8 107 88.8
Haze_22489 Corylus avellana HOM05D001366 ORTHO05D005449 5.3e-47 191.4 107 87.9
Gohir.A05G264200 Gossypium hirsutum HOM05D001366 ORTHO05D005449 5.3e-47 191.4 107 89.7
ATR0691G175 Amborella trichopoda HOM05D001366 ORTHO05D005449 6.9e-47 191.0 107 87.9
Gohir.D05G266700 Gossypium hirsutum HOM05D001366 ORTHO05D005449 6.9e-47 191.0 107 89.7
MBI19_g32700_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D005449 6.9e-47 191.0 107 88.8
Sed0015347 Sechium edule HOM05D001366 ORTHO05D005449 6.9e-47 191.0 107 87.9
DCAR_006444 Daucus carota HOM05D001366 ORTHO05D005449 9.0e-47 190.7 107 88.8
Rhsim07G0213700 Rhododendron simsii HOM05D001366 ORTHO05D005449 9.0e-47 190.7 107 87.9
TWI09G0135 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 9.0e-47 190.7 107 88.8
TPR.G15622 Trifolium pratense HOM05D001366 ORTHO05D005449 1.2e-46 190.3 105 89.5
TWI73G1055 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 1.2e-46 190.3 107 88.8
MELO3C008106.2 Cucumis melo HOM05D001366 ORTHO05D005449 1.5e-46 189.9 107 86.9
Thecc.08G074000 Theobroma cacao HOM05D001366 ORTHO05D005449 1.5e-46 189.9 107 87.9
ECA240G3991 Erigeron canadensis HOM05D001366 ORTHO05D005449 2.6e-46 189.1 107 88.8
Eucgr.F00436 Eucalyptus grandis HOM05D001366 ORTHO05D005449 2.6e-46 189.1 107 87.9
CsaV3_2G033350 Cucumis sativus L. HOM05D001366 ORTHO05D005449 4.5e-46 188.3 107 87.9
Os05g0107700 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 4.5e-46 188.3 107 87.9
Gohir.D05G220900 Gossypium hirsutum HOM05D001366 ORTHO05D005449 5.9e-46 188.0 107 87.9
Gorai.009G228000 Gossypium raimondii HOM05D001366 ORTHO05D005449 5.9e-46 188.0 107 87.9
HanXRQChr03g0063191 Helianthus annuus HOM05D001366 ORTHO05D005449 7.7e-46 187.6 109 86.2
Lsat_1_v5_gn_6_107360 Lactuca sativa HOM05D001366 ORTHO05D005449 1.3e-45 186.8 106 85.8
Duzib041G0019 Durio zibethinus HOM05D001366 ORTHO05D005449 2.9e-45 185.7 107 85.0
HanXRQChr10g0277741 Helianthus annuus HOM05D001366 ORTHO05D005449 2.9e-45 185.7 107 85.0
Zm00001eb356100 Zea mays HOM05D001366 ORTHO05D005449 3.8e-45 185.3 107 85.0
MSTRG.5323 Avicennia marina HOM05D001366 ORTHO05D005449 5.0e-45 184.9 107 85.0
HPP92_010288 Vanilla planifolia HOM05D001366 ORTHO05D005449 8.5e-45 184.1 106 84.9
Oeu040884.1 Olea europaea HOM05D001366 ORTHO05D005449 1.1e-44 183.7 107 86.0
CSS0031876 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 1.9e-44 183.0 107 85.0
TWI56G0439 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 2.5e-44 182.6 107 84.1
MSTRG.27758 Avicennia marina HOM05D001366 ORTHO05D005449 5.5e-44 181.4 107 83.2
TPR.G38776 Trifolium pratense HOM05D001366 ORTHO05D005449 5.5e-44 181.4 107 84.1
Medtr5g066740 Medicago truncatula HOM05D001366 ORTHO05D005449 9.4e-44 180.6 111 79.3
Rhsim02G0071900 Rhododendron simsii HOM05D001366 ORTHO05D005449 9.4e-44 180.6 123 77.2
Os01g0970500 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 1.2e-43 180.3 104 82.7
SalBow6G3832 Salvia bowleyana HOM05D001366 ORTHO05D005449 1.2e-43 180.3 107 84.1
SalBow6G5818 Salvia bowleyana HOM05D001366 ORTHO05D005449 1.2e-43 180.3 107 84.1
Migut.N01147 Erythranthe guttata HOM05D001366 ORTHO05D005449 1.6e-43 179.9 107 84.1
Gohir.A05G216500 Gossypium hirsutum HOM05D001366 ORTHO05D005449 1.6e-43 179.9 117 80.3
SalBow3G1925 Salvia bowleyana HOM05D001366 ORTHO05D005449 1.6e-43 179.9 107 84.1
SGA_v2.0_scaffold337G49194 Striga asiatica HOM05D001366 ORTHO05D005449 1.6e-43 179.9 107 84.1
Zm00001eb139900 Zea mays HOM05D001366 ORTHO05D005449 3.6e-43 178.7 104 84.6
MSTRG.16686 Avicennia marina HOM05D001366 ORTHO05D005449 1.8e-42 176.4 106 80.2
Sabra05G0119200 Salix brachista HOM05D001366 ORTHO05D005449 1.8e-42 176.4 133 70.7
AUR62017035 Chenopodium quinoa HOM05D001366 ORTHO05D005449 3.0e-42 175.6 94 93.6
SGA_v2.0_scaffold219G42523 Striga asiatica HOM05D001366 ORTHO05D005449 3.0e-42 175.6 105 82.9
unitig_22.g6842 Utricularia gibba HOM05D001366 ORTHO05D005449 2.0e-41 172.9 107 78.5
MD08G1203900 Malus domestica HOM05D001366 ORTHO05D005449 2.8e-40 169.1 94 88.3
SHI29728 Sapria himalayana HOM05D001366 ORTHO05D005449 3.7e-40 168.7 107 82.2
Psat0s2399g0160 Pisum sativum HOM05D001366 ORTHO05D005449 4.1e-39 165.2 104 75.0
ECA246G1742 Erigeron canadensis HOM05D001366 ORTHO05D005449 5.9e-38 161.4 98 79.6
Actinidia19254 Actinidia chinensis HOM05D001366 ORTHO05D005449 2.2e-37 159.5 107 72.9
Lsat_1_v5_gn_7_43741 Lactuca sativa HOM05D001366 ORTHO05D005449 4.2e-36 155.2 83 91.6
Oeu038169.3 Olea europaea HOM05D001366 ORTHO05D005449 9.4e-36 154.1 165 55.8
Duzib116G0949 Durio zibethinus HOM05D001366 ORTHO05D005449 6.1e-35 151.4 107 73.8
TAR381G0322 Trochodendron aralioides HOM05D001366 ORTHO05D005449 7.9e-35 151.0 107 72.0
Mapoly0012s0108 Marchantia polymorpha HOM05D001366 ORTHO05D005449 2.6e-33 146.0 107 61.7
Pp3c9_10830 Physcomitrium patens HOM05D001366 ORTHO05D005449 4.4e-33 145.2 107 63.6
Pp3c15_13540 Physcomitrium patens HOM05D001366 ORTHO05D005449 5.7e-33 144.8 107 63.6
AagrBONN_evm.TU.Sc2ySwM_228.5579 Anthoceros agrestis HOM05D001366 ORTHO05D005449 7.4e-33 144.4 107 59.8
AagrBONN_evm.TU.Sc2ySwM_228.3950 Anthoceros agrestis HOM05D001366 ORTHO05D005449 8.2e-32 141.0 107 58.9
SMO169G0007 Selaginella moellendorffii HOM05D001366 ORTHO05D005449 2.0e-30 136.3 106 58.5
Actinidia19617 Actinidia chinensis HOM05D001366 ORTHO05D005449 1.7e-29 133.3 71 90.1
Migut.B00439 Erythranthe guttata HOM05D001366 ORTHO05D005449 6.7e-26 121.3 107 59.8
RcHm_v2.0_Chr5g0012851 Rosa chinensis HOM05D001366 ORTHO05D005449 4.4e-25 118.6 107 57.0
unitig_8.g3420 Utricularia gibba HOM05D001366 ORTHO05D005449 1.8e-23 113.2 93 61.3
Lsat_1_v5_gn_4_60280 Lactuca sativa HOM05D001366 ORTHO05D005449 3.1e-23 112.5 66 84.8
Dinv42590 Davidia involucrata HOM05D001366 ORTHO05D005449 2.0e-22 109.8 69 82.6
Ca_08744_v3 Cicer arietinum L. HOM05D001366 ORTHO05D005449 2.7e-22 109.4 60 93.3
VMungo0647G1399 Vigna mungo HOM05D001366 ORTHO05D005449 2.7e-22 109.4 60 93.3
QL09p018667 Quercus lobata HOM05D001366 ORTHO05D005449 4.5e-22 108.6 60 93.3
vmacro04625 Vaccinium macrocarpon HOM05D001366 ORTHO05D005449 1.7e-21 106.7 60 90.0
Haze_27711 Corylus avellana HOM05D001366 ORTHO05D005449 6.5e-21 104.8 100 49.0
AagrBONN_evm.TU.Sc2ySwM_368.1269 Anthoceros agrestis HOM05D001366 ORTHO05D005449 1.9e-20 103.2 112 42.9
C06p07570 Brassica napus HOM05D001366 ORTHO05D005449 1.4e-18 97.1 107 57.0
BolC6t35845H Brassica oleracea HOM05D001366 ORTHO05D005449 1.4e-18 97.1 107 57.0
Mapoly0067s0078 Marchantia polymorpha HOM05D001366 ORTHO05D005449 3.4e-17 92.4 98 45.9
BcaC08g43388 Brassica carinata HOM05D001366 ORTHO05D005449 1.7e-16 90.1 84 56.0
AUR62014838 Chenopodium quinoa HOM05D001366 ORTHO05D005449 4.8e-16 88.6 62 77.4
HanXRQChr05g0143271 Helianthus annuus HOM05D001366 ORTHO05D005449 9.1e-15 84.3 53 79.2
Cre10.g424150 Chlamydomonas reinhardtii HOM05D001366 ORTHO05D005449 1.5e-12 77.0 100 36.0
Lsat_1_v5_gn_8_150280 Lactuca sativa HOM05D001675 ORTHO05D004161 1.2e-11 73.9 47 80.9
PRCOL_00001724 Prasinoderma coloniale HOM05D001366 ORTHO05D005449 2.6e-09 66.2 92 33.7
HanXRQChr11g0353851 Helianthus annuus HOM05D001366 ORTHO05D005449 2.8e-08 62.8 36 83.3
TAR374G0947 Trochodendron aralioides HOM05D000025 ORTHO05D000040 3.7e-08 62.4 34 76.5
Lsat_1_v5_gn_8_45161 Lactuca sativa HOM05D001675 ORTHO05D001808 4.1e-07 58.9 38 81.6


User provided reference genes

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