Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 1.1e-223 779.6 394 100.0
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.6e-126 456.8 388 63.9
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 4.1e-125 452.2 402 62.7
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.8e-117 426.8 449 55.7
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 1.7e-115 420.2 393 57.8
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 2.5e-114 416.4 393 58.5
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 4.8e-110 402.1 393 55.7
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 3.8e-107 392.5 398 52.8
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 2.7e-105 386.3 396 53.8
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 2.0e-103 380.2 387 54.5
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 7.4e-103 378.3 388 53.4
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.3e-102 377.5 387 53.0
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 5.9e-100 368.6 379 52.5
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 1.7e-99 367.1 397 52.9
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 2.9e-99 366.3 388 51.5
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 6.5e-99 365.2 394 51.5
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 8.5e-99 364.8 392 52.3
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 2.5e-98 363.2 387 50.4
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 5.5e-98 362.1 395 51.4
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 2.1e-97 360.1 392 49.0
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 3.6e-97 359.4 391 51.4
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 4.7e-97 359.0 391 51.7
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 6.1e-97 358.6 390 50.3
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 2.3e-96 356.7 391 52.2
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 4.0e-96 355.9 385 49.9
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 4.0e-96 355.9 391 51.2
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 4.0e-96 355.9 390 50.3
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 1.2e-95 354.4 399 49.6
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.5e-95 354.0 386 51.0
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 5.7e-95 352.1 401 51.4
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 5.7e-95 352.1 389 50.6
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 5.7e-95 352.1 417 48.9
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 7.5e-95 351.7 398 50.8
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 9.7e-95 351.3 390 49.0
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 1.3e-94 350.9 389 51.7
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 1.3e-94 350.9 395 52.4
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 1.3e-94 350.9 381 49.9
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 2.2e-94 350.1 397 49.9
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 2.2e-94 350.1 388 50.8
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 2.2e-94 350.1 394 50.8
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 2.2e-94 350.1 400 50.5
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 4.8e-94 349.0 393 48.9
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 4.8e-94 349.0 395 49.9
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 4.8e-94 349.0 384 51.6
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.4e-93 347.4 388 50.0
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 1.8e-93 347.1 395 50.1
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 2.4e-93 346.7 395 50.1
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 4.1e-93 345.9 380 50.0
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.2e-92 344.4 327 56.9
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 1.6e-92 344.0 387 51.2
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 1.0e-91 341.3 391 49.9
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 2.2e-91 340.1 315 56.2
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 2.9e-91 339.7 385 50.6
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 6.5e-91 338.6 387 51.2
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 8.5e-91 338.2 389 48.6
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 8.5e-91 338.2 381 48.3
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 8.5e-91 338.2 388 49.7
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 1.5e-90 337.4 391 48.3
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 3.2e-90 336.3 388 49.0
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 3.2e-90 336.3 390 49.2
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 7.2e-90 335.1 384 48.4
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 7.2e-90 335.1 384 50.8
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 9.4e-90 334.7 348 52.3
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 2.1e-89 333.6 385 48.1
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 4.7e-89 332.4 385 49.1
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 2.3e-88 330.1 386 50.3
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 2.6e-87 326.6 396 49.2
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 4.4e-87 325.9 384 49.7
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 5.7e-87 325.5 379 49.9
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 1.7e-86 323.9 384 48.7
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 2.8e-86 323.2 391 48.8
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 6.3e-86 322.0 384 48.4
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 6.3e-86 322.0 393 49.1
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 8.3e-86 321.6 385 48.1
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 8.3e-86 321.6 384 48.4
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 8.3e-86 321.6 385 48.1
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 7.0e-85 318.5 386 48.2
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 7.0e-85 318.5 389 46.8
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 1.7e-83 313.9 394 48.5
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 4.7e-81 305.8 379 46.2
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 1.8e-80 303.9 331 51.4
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 2.8e-78 296.6 348 50.6
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 2.4e-77 293.5 381 47.5
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 5.9e-76 288.9 383 43.6
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 2.3e-75 287.0 401 42.9
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 2.5e-74 283.5 395 43.8
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 1.3e-70 271.2 280 49.6
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 8.3e-70 268.5 340 42.6
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 1.2e-65 254.6 295 48.8
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 4.3e-58 229.6 585 31.8
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 8.9e-56 221.9 281 43.1
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 1.5e-55 221.1 248 50.4
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 6.6e-51 205.7 319 38.2
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 2.5e-50 203.8 189 58.7
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 4.4e-47 193.0 225 50.7
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 5.8e-47 192.6 164 62.8
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 3.8e-46 189.9 375 33.3
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 6.0e-44 182.6 233 45.5
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.0e-43 181.8 205 48.8
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.8e-40 171.0 166 53.6
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 7.6e-39 165.6 396 32.6
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 3.8e-38 163.3 218 46.3
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.4e-37 160.6 208 44.2
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 1.3e-33 148.3 144 55.6
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 5.3e-32 142.9 106 59.4
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 1.2e-31 141.7 194 41.8
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 1.1e-24 118.6 132 50.8
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 9.0e-24 115.5 261 34.5
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 6.0e-20 102.8 118 48.3
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.9e-06 57.4 136 25.7
CDE02G2376 Ceratophyllum demersum HOM05D001245 ORTHO05D004475 3.8e-06 57.0 77 36.4
unitig_21.g20280 Utricularia gibba HOM05D001245 ORTHO05D004475 3.8e-06 57.0 81 32.1
HPP92_027721 Vanilla planifolia HOM05D001245 ORTHO05D004475 8.5e-06 55.8 81 30.9


User provided reference genes

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