Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-175 619.0 307 100.0
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.6e-139 497.7 355 74.9
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.8e-136 489.6 370 72.2
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.3e-136 489.2 377 71.1
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-135 486.5 377 70.6
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-135 486.5 377 70.6
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-135 486.5 377 70.6
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-135 486.5 377 70.6
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-135 486.5 377 70.6
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-135 486.5 377 70.6
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-135 486.5 377 70.6
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.3e-126 454.1 360 70.3
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.6e-123 444.5 372 66.7
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.6e-123 444.5 372 66.7
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.7e-121 438.3 355 67.9
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.3e-102 377.1 395 57.2
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-97 360.1 331 63.1
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.9e-85 320.1 405 50.4
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.1e-84 316.6 412 49.8
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.6e-84 315.5 405 49.6
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.3e-78 297.4 418 47.1
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 4.9e-78 295.4 412 47.6
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 5.5e-77 292.0 415 48.4
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 7.1e-77 291.6 352 54.3
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.7e-76 289.7 406 47.8
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 5.1e-75 285.4 405 48.4
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 2.5e-74 283.1 405 48.1
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 1.6e-73 280.4 402 47.0
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 1.1e-72 277.7 375 47.7
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 1.8e-72 276.9 397 47.9
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 1.9e-69 266.9 397 44.1
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 2.5e-69 266.5 411 45.5
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 1.6e-68 263.8 402 45.3
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.8e-67 260.4 394 46.2
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 3.0e-67 259.6 423 43.5
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 5.1e-67 258.8 397 45.1
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 5.1e-67 258.8 397 45.1
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 5.1e-67 258.8 397 45.1
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 5.7e-66 255.4 332 50.6
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-65 253.8 347 47.6
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-65 253.8 347 47.6
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-65 253.8 347 47.6
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-65 253.8 347 47.6
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 7.7e-63 245.0 388 42.8
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 2.5e-61 240.0 386 44.0
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 2.8e-57 226.5 389 44.2
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 5.9e-55 218.8 340 46.8
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 1.7e-54 217.2 349 42.4
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 4.1e-48 196.1 293 45.7
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.7e-47 191.8 242 53.3
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.6e-44 184.1 267 47.6
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.6e-44 184.1 267 47.6
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 4.0e-43 179.5 282 44.7
MSTRG.17791 Avicennia marina HOM05D000216 ORTHO05D000634 6.5e-38 162.2 270 43.7
Lj2C1237G1 Lonicera japonica HOM05D000216 ORTHO05D000634 2.5e-37 160.2 191 50.8
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 2.5e-37 160.2 191 50.8
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-34 151.4 172 52.9
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 1.7e-33 147.5 173 51.4
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.4e-32 144.4 197 51.8
Solyc08g028920.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-31 141.0 198 45.5
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 3.5e-31 139.8 120 60.0
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 3.8e-30 136.3 306 37.3
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 1.1e-29 134.8 226 42.5
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 2.5e-29 133.7 150 51.3
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 5.5e-29 132.5 181 45.3
HanXRQChr14g0455001 Helianthus annuus HOM05D000216 ORTHO05D000634 9.5e-29 131.7 135 58.5
Gohir.A07G183950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 8.0e-28 128.6 109 62.4
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.0e-28 128.6 126 54.8
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 5.2e-27 125.9 337 32.6
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 5.2e-27 125.9 342 31.9
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-26 124.8 120 59.2
Phvul.003G256666 Phaseolus vulgaris HOM05D000216 ORTHO05D000634 1.2e-26 124.8 121 56.2
Potri.019G027580 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.5e-26 124.4 111 63.1
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 8.3e-25 118.6 204 41.2
Potri.019G027720 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.1e-24 118.2 111 61.3
Hund10655 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-23 114.8 65 84.6
GSVIVG01034287001 Vitis vinifera HOM05D000216 ORTHO05D000634 4.5e-23 112.8 100 65.0
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 7.8e-23 112.1 315 34.0
BraSC140t45608Z Brassica rapa HOM05D000216 ORTHO05D000634 1.3e-22 111.3 128 55.5
Solyc01g056330.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.3e-22 111.3 102 60.8
BraSC143t45681Z Brassica rapa HOM05D000216 ORTHO05D000634 5.0e-22 109.4 138 52.2
Gorai.013G018800 Gossypium raimondii HOM05D000216 ORTHO05D000634 5.6e-21 105.9 111 55.0
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.0e-19 100.1 136 44.9
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 8.9e-19 98.6 138 43.5
Gorai.008G142400 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.5e-18 97.8 98 58.2
Gohir.D12G131101 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.0e-18 97.4 93 59.1
Migut.G01245 Erythranthe guttata HOM05D000216 ORTHO05D000634 7.5e-18 95.5 88 56.8
HanXRQChr00c0313g0573471 Helianthus annuus HOM05D000216 ORTHO05D000634 3.7e-17 93.2 117 47.0
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 7.0e-16 89.0 127 41.7
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 1.6e-15 87.8 154 40.3
Zm00001eb434960 Zea mays HOM05D000216 ORTHO05D000634 3.5e-15 86.7 154 39.6
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 3.5e-15 86.7 154 39.6
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 3.5e-15 86.7 154 39.6
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 3.5e-15 86.7 154 39.6
Gohir.A09G101340 Gossypium hirsutum HOM05D000216 ORTHO05D000634 7.8e-15 85.5 80 58.8
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 3.9e-14 83.2 278 28.1
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 8.6e-14 82.0 215 36.7
TPR.G2741 Trifolium pratense HOM05D000216 ORTHO05D000634 1.9e-13 80.9 84 57.1
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 4.3e-13 79.7 129 42.6
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 4.3e-13 79.7 55 69.1
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 7.3e-13 79.0 56 71.4
Aa31csc39G130 Aethionema arabicum HOM05D000216 ORTHO05D000634 9.5e-13 78.6 142 41.5
Solyc06g074600.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.7e-12 76.3 50 72.0
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.2e-12 75.9 55 65.5
arahy.Tifrunner.gnm1.ann1.8W122S Arachis hypogaea HOM05D000216 ORTHO05D000634 1.8e-11 74.3 176 34.1
Nn4g23967 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.8e-11 74.3 55 67.3
MELO3C000330.2 Cucumis melo HOM05D000216 ORTHO05D000634 2.3e-11 73.9 106 47.2
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 4.0e-11 73.2 65 63.1
arahy.Tifrunner.gnm1.ann1.RVT61B Arachis hypogaea HOM05D000216 ORTHO05D000634 8.9e-11 72.0 152 35.5
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 1.2e-10 71.6 56 62.5
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 1.2e-10 71.6 56 62.5
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 2.0e-10 70.9 83 45.8
Gohir.D13G016950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.6e-10 70.5 71 53.5
HanXRQChr14g0455011 Helianthus annuus HOM05D000216 ORTHO05D000634 2.6e-10 70.5 89 46.1
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 3.4e-10 70.1 133 43.6
Zm00001eb418100 Zea mays HOM05D000216 ORTHO05D000634 5.8e-10 69.3 84 45.2
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 3.5e-07 60.1 60 53.3
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.3e-06 58.2 111 31.5
HanXRQChr03g0073111 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-06 57.8 96 40.6
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 5.0e-06 56.2 37 73.0
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 8.6e-06 55.5 144 35.4


User provided reference genes

Program Settings