Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 0.0e+00 1960.3 981 100.0
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 0.0e+00 1582.0 1003 82.0
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 0.0e+00 1115.1 979 61.8
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 6.7e-312 1073.5 964 60.7
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 4.2e-304 1048.1 901 62.7
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 5.0e-281 971.5 886 62.0
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 2.1e-263 912.9 975 54.5
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 5.3e-251 871.7 974 53.5
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 7.5e-245 851.3 993 50.9
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 6.3e-244 848.2 996 50.3
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 9.1e-243 844.3 999 49.7
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 1.4e-238 830.5 1002 49.2
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 1.8e-238 830.1 988 49.6
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 5.7e-237 825.1 915 53.2
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 3.3e-232 809.3 1005 48.3
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 2.1e-231 806.6 1005 49.4
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 6.1e-231 805.1 992 49.5
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 2.3e-230 803.1 1008 48.4
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 3.0e-230 802.7 1000 47.9
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 8.9e-230 801.2 1005 49.3
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 1.2e-229 800.8 981 48.3
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 7.5e-229 798.1 992 47.8
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 9.8e-229 797.7 973 49.4
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 1.3e-228 797.3 1009 47.9
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.7e-228 795.8 995 48.4
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 4.9e-228 795.4 995 48.6
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 8.3e-228 794.7 1005 49.2
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 5.4e-227 792.0 959 50.5
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 5.4e-227 792.0 991 48.9
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.2e-226 790.8 993 48.2
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 5.9e-226 788.5 995 48.1
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 2.9e-225 786.2 1000 48.3
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 3.9e-225 785.8 1002 47.6
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.1e-224 784.3 995 47.4
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 5.6e-224 781.9 784 56.6
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 1.6e-223 780.4 971 49.1
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 1.4e-222 777.3 997 48.2
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 4.0e-222 775.8 828 55.3
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 2.0e-221 773.5 1000 47.0
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 4.9e-220 768.8 1000 47.5
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 2.4e-219 766.5 1033 45.9
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 5.4e-219 765.4 1001 47.4
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 5.4e-219 765.4 983 48.4
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 1.2e-218 764.2 995 47.5
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 1.6e-218 763.8 968 47.7
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 1.0e-217 761.1 877 52.2
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 2.3e-217 760.0 910 49.3
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 3.0e-217 759.6 1009 47.2
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 3.9e-217 759.2 1002 47.0
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 8.6e-217 758.1 1004 46.9
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 9.5e-216 754.6 756 56.5
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 1.2e-215 754.2 845 53.3
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 1.6e-215 753.8 1005 46.8
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 3.6e-215 752.7 972 47.1
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 3.6e-215 752.7 845 52.9
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 3.6e-215 752.7 1005 47.2
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 6.2e-215 751.9 761 56.9
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 6.2e-215 751.9 877 51.1
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 8.1e-215 751.5 996 47.0
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 1.8e-214 750.4 987 46.5
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 1.8e-214 750.4 983 47.2
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 3.1e-214 749.6 1006 46.7
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 4.0e-214 749.2 1006 46.7
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 2.0e-213 746.9 780 55.6
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 5.8e-213 745.3 810 54.8
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 1.3e-212 744.2 799 54.9
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 1.7e-212 743.8 880 51.6
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 2.9e-212 743.0 919 49.0
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 4.1e-211 739.2 726 58.1
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 9.2e-211 738.0 771 55.6
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 1.5e-208 730.7 758 55.1
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 1.4e-206 724.2 764 54.7
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.8e-206 723.8 886 49.8
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 4.0e-206 722.6 779 53.5
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 5.8e-205 718.8 752 53.6
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 7.6e-205 718.4 748 54.0
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 7.6e-205 718.4 879 50.2
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 3.7e-204 716.1 779 54.7
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 4.1e-203 712.6 812 51.7
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 3.9e-201 706.1 1016 44.7
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 2.5e-200 703.4 708 56.5
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 5.2e-198 695.7 874 49.9
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 7.6e-197 691.8 931 46.0
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 7.6e-197 691.8 747 53.0
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 1.4e-195 687.6 840 49.9
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 3.2e-195 686.4 838 49.2
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 3.9e-193 679.5 697 55.1
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 2.9e-188 663.3 982 42.4
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 1.1e-187 661.4 683 55.5
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 1.0e-185 654.8 965 44.4
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 3.0e-177 626.7 612 56.4
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 6.0e-170 602.4 867 45.4
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 3.7e-167 593.2 744 48.3
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 6.9e-166 589.0 698 51.6
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 4.2e-163 579.7 1095 37.8
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 3.3e-160 570.1 632 53.8
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 2.2e-159 567.4 822 45.3
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 2.8e-143 513.8 751 43.9
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 1.1e-142 511.9 631 46.9
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 3.1e-142 510.4 571 53.1
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 2.2e-140 504.2 723 43.7
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 5.0e-140 503.1 1021 37.1
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 9.1e-134 482.3 742 40.3
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 5.9e-133 479.6 724 43.4
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 3.2e-131 473.8 569 48.5
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 3.2e-123 447.2 689 42.1
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 4.0e-121 440.3 739 39.0
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 2.3e-113 414.5 569 43.9
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 6.2e-82 310.1 642 35.7
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 3.0e-68 264.6 257 58.4
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.7e-55 222.2 232 52.2
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 2.3e-44 185.3 371 30.7
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 1.1e-38 166.4 228 45.2
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 1.6e-37 162.5 336 31.0
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 3.0e-20 105.1 273 31.9
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 2.8e-18 98.6 114 46.5
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 4.1e-17 94.7 74 64.9
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 3.8e-15 88.2 124 40.3
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 9.4e-14 83.6 246 31.3
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 6.8e-12 77.4 58 67.2
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 8.6e-07 60.5 41 75.6
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.9e-06 59.3 42 78.6
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 4.2e-06 58.2 85 42.4


User provided reference genes

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