Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22027 Corylus avellana HOM05D004601 ORTHO05D005806 8.1e-177 623.6 313 100.0
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 3.4e-159 565.1 311 92.9
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 3.3e-146 521.9 309 84.5
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 5.8e-143 511.1 309 83.2
ClCG11G011730 Citrullus lanatus HOM05D004601 ORTHO05D005806 1.1e-141 506.9 306 83.0
Lj7A622G14 Lonicera japonica HOM05D004601 ORTHO05D005806 1.4e-141 506.5 309 82.8
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 7.1e-141 504.2 309 81.6
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 9.3e-141 503.8 307 82.4
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 1.2e-140 503.4 309 81.9
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 1.6e-140 503.1 309 82.5
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 2.1e-140 502.7 309 81.6
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 2.1e-140 502.7 309 81.6
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 2.7e-140 502.3 309 80.9
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 1.0e-139 500.4 309 80.6
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 3.0e-139 498.8 309 80.3
Hma1.2p1_0235F.1_g098680 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 3.0e-139 498.8 309 79.9
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 5.1e-139 498.0 309 81.6
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 6.7e-139 497.7 309 81.6
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 8.7e-139 497.3 309 80.9
Medtr2g038030 Medicago truncatula HOM05D004601 ORTHO05D005806 8.7e-139 497.3 312 81.1
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 1.1e-138 496.9 311 81.0
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 1.5e-138 496.5 309 80.6
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 1.9e-138 496.1 311 81.7
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 2.5e-138 495.7 312 80.8
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 2.5e-138 495.7 310 81.0
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 3.3e-138 495.4 309 79.6
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 4.3e-138 495.0 309 79.3
arahy.Tifrunner.gnm1.ann1.8TE3EA Arachis hypogaea HOM05D004601 ORTHO05D005806 7.4e-138 494.2 309 80.6
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 7.4e-138 494.2 309 80.6
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 9.7e-138 493.8 296 84.1
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 6.3e-137 491.1 310 78.4
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 1.4e-136 490.0 312 80.8
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 3.1e-136 488.8 309 79.9
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 6.9e-136 487.6 312 78.8
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 2.6e-135 485.7 309 79.6
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 2.6e-135 485.7 309 79.6
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 1.0e-134 483.8 311 78.5
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 1.7e-134 483.0 309 79.9
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 6.5e-134 481.1 327 75.2
Psat1g144440 Pisum sativum HOM05D004601 ORTHO05D005806 8.5e-134 480.7 312 79.2
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 1.4e-133 479.9 310 77.4
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 2.5e-133 479.2 310 76.8
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 2.5e-133 479.2 310 77.1
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 3.2e-133 478.8 308 79.9
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 5.5e-133 478.0 310 76.1
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 5.5e-133 478.0 310 76.1
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 5.5e-133 478.0 310 76.1
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 5.5e-133 478.0 310 76.1
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 9.4e-133 477.2 309 78.3
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 9.4e-133 477.2 307 77.5
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 1.6e-132 476.5 307 77.9
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 2.1e-132 476.1 314 77.7
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 2.7e-132 475.7 310 76.8
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 4.6e-132 474.9 314 76.4
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 4.6e-132 474.9 314 76.4
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 6.1e-132 474.6 310 75.8
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 1.0e-131 473.8 310 76.1
Solyc07g017990.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 3.9e-131 471.9 310 77.1
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 3.9e-131 471.9 310 77.1
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 4.3e-130 468.4 311 76.2
Oeu019558.1 Olea europaea HOM05D004601 ORTHO05D005806 7.4e-130 467.6 314 75.5
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 7.4e-130 467.6 308 74.7
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 2.8e-129 465.7 308 74.0
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 8.2e-129 464.2 307 76.5
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 1.8e-128 463.0 309 76.4
DCAR_020147 Daucus carota HOM05D004601 ORTHO05D005806 7.7e-127 457.6 292 79.5
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 1.0e-126 457.2 310 74.8
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 1.3e-126 456.8 345 69.0
ATR0626G236 Amborella trichopoda HOM05D004601 ORTHO05D005806 1.7e-126 456.4 307 75.6
Nitab4.5_0000056g0070 Nicotiana tabacum HOM05D004601 ORTHO05D005806 1.7e-126 456.4 337 70.6
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 3.8e-126 455.3 286 81.8
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 4.2e-125 451.8 290 79.0
SHI03064 Sapria himalayana HOM05D004601 ORTHO05D005806 1.0e-123 447.2 309 72.8
Manes.14G159112 Manihot esculenta HOM05D004601 ORTHO05D005806 6.7e-123 444.5 290 79.0
Peaxi162Scf00231g01116 Petunia axillaris HOM05D004601 ORTHO05D005806 7.0e-120 434.5 291 76.3
MBI16_g47869_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 5.0e-118 428.3 307 71.3
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 1.8e-115 419.9 303 69.6
Ah.06g194430 Amaranthus hybridus HOM05D004601 ORTHO05D005806 3.7e-113 412.1 308 66.6
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 3.5e-111 405.6 313 66.8
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 4.7e-108 395.2 293 69.3
TAR383G0412 Trochodendron aralioides HOM05D004601 ORTHO05D005806 1.6e-103 380.2 235 80.0
Pp3c14_5920 Physcomitrium patens HOM05D004601 ORTHO05D005806 1.7e-102 376.7 312 61.5
Mapoly0001s0137 Marchantia polymorpha HOM05D004601 ORTHO05D005806 3.8e-102 375.6 307 61.9
AagrBONN_evm.TU.Sc2ySwM_228.1820 Anthoceros agrestis HOM05D004601 ORTHO05D005806 1.2e-98 364.0 306 58.2
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 1.8e-96 356.7 311 59.5
SMO144G0133 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 1.6e-95 353.6 306 58.2
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 3.8e-94 349.0 309 58.9
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 8.3e-89 331.3 758 33.2
ECA236G0938 Erigeron canadensis HOM05D004601 ORTHO05D005806 8.6e-86 321.2 219 74.9
CARHR270950 Cardamine hirsuta HOM05D004601 ORTHO05D005806 6.4e-73 278.5 154 85.7
CsaV3_2G008760 Cucumis sativus L. HOM05D004601 ORTHO05D005806 6.8e-67 258.5 132 90.9
CBR_g35050 Chara braunii HOM05D004601 ORTHO05D005806 2.1e-63 246.9 247 50.6
Glyma.09G060066 Glycine max HOM05D004601 ORTHO05D005806 3.3e-61 239.6 135 87.4
HPP92_021964 Vanilla planifolia HOM05D004601 ORTHO05D005806 9.9e-58 228.0 125 84.8
Lalb_Chr00c63g0413841 Lupinus albus HOM05D004601 ORTHO05D005806 6.4e-57 225.3 172 69.2
BcaB08g35989 Brassica carinata HOM05D004601 ORTHO05D005806 2.4e-56 223.4 120 85.0
Sopen07g006910 Solanum pennellii HOM05D004601 ORTHO05D005806 6.9e-51 205.3 139 74.8
AagrBONN_evm.TU.Sc2ySwM_228.3225 Anthoceros agrestis HOM05D004601 ORTHO05D005806 1.2e-50 204.5 306 36.9
Nitab4.5_0006199g0010 Nicotiana tabacum HOM05D004601 ORTHO05D005806 5.1e-46 189.1 166 62.0
ECA236G3967 Erigeron canadensis HOM05D004601 ORTHO05D005806 5.3e-43 179.1 108 77.8
PRCOL_00001076 Prasinoderma coloniale HOM05D004601 ORTHO05D005806 7.6e-42 175.3 283 39.9
MCO08G104 Micromonas commoda HOM05D004601 ORTHO05D005806 7.1e-40 168.7 271 36.9
CAN.G285.3 Capsicum annuum HOM05D004601 ORTHO05D005806 1.3e-36 157.9 110 72.7
Cre10.g433550 Chlamydomonas reinhardtii HOM05D004601 ORTHO05D005806 1.4e-32 144.4 270 37.8
Sopen00g010200 Solanum pennellii HOM05D004601 ORTHO05D005806 3.5e-31 139.8 79 79.7
Cfa023642 Carpinus fangiana HOM05D004601 ORTHO05D005806 1.1e-29 134.8 278 31.7
SEGI_14441 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 1.6e-28 131.0 80 73.8
Nitab4.5_0006199g0030 Nicotiana tabacum HOM05D004601 ORTHO05D005806 1.4e-24 117.9 68 73.5
Actinidia07546 Actinidia chinensis HOM05D004601 ORTHO05D005806 2.7e-23 113.6 73 74.0
SEGI_06603 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 2.3e-22 110.5 124 38.7
C02p13910 Brassica napus HOM05D004601 ORTHO05D041326 3.9e-22 109.8 247 33.2
BolC2t07510H Brassica oleracea HOM05D004601 ORTHO05D041326 6.7e-22 109.0 247 33.6
FAN10G0665 Fragaria x ananassa HOM05D004601 ORTHO05D005806 1.1e-21 108.2 73 74.0
SEGI_11293 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 2.6e-18 97.1 183 34.4
CSS0044178 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 7.7e-18 95.5 55 76.4
SMO144G0102 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 7.7e-18 95.5 137 45.3
Rhsim01G0114900 Rhododendron simsii HOM05D004601 ORTHO05D005806 6.5e-17 92.4 71 63.4
RhsimUnG0137600 Rhododendron simsii HOM05D004601 ORTHO05D005806 9.4e-16 88.6 64 67.2
CBR_g50203 Chara braunii HOM05D004601 ORTHO05D005806 6.3e-12 75.9 54 53.7
SMO229G0037 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 2.9e-09 67.0 66 59.1
TAR383G0023 Trochodendron aralioides HOM05D004601 ORTHO05D005806 3.2e-08 63.5 35 88.6
Cre06.g277801 Chlamydomonas reinhardtii HOM05D004601 ORTHO05D143102 4.2e-08 63.2 161 26.1


User provided reference genes

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