Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0465621 Helianthus annuus HOM05D003791 ORTHO05D019539 2.0e-64 248.8 118 100.0
HanXRQChr13g0403561 Helianthus annuus HOM05D003791 ORTHO05D004961 1.9e-25 119.4 89 67.4
ECA233G0170 Erigeron canadensis HOM05D003791 ORTHO05D004961 3.5e-24 115.2 89 65.2
Lsat_1_v5_gn_6_42140 Lactuca sativa HOM05D003791 ORTHO05D004961 5.6e-14 81.3 86 51.2
Dinv12566 Davidia involucrata HOM05D003791 ORTHO05D004961 9.6e-14 80.5 93 48.4
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla HOM05D003791 ORTHO05D004961 9.6e-14 80.5 79 54.4
Dinv29393 Davidia involucrata HOM05D003791 ORTHO05D004961 1.3e-13 80.1 92 48.9
Duzib168G1694 Durio zibethinus HOM05D003791 ORTHO05D004961 3.7e-13 78.6 85 45.9
Nn6g35161 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.8e-12 76.3 75 49.3
Ciclev10027764m.g Citrus clementina HOM05D003791 ORTHO05D004961 3.1e-12 75.5 87 42.5
Nn2g13909 Nelumbo nucifera HOM05D003791 ORTHO05D004961 3.1e-12 75.5 66 56.1
TAR623G0647 Trochodendron aralioides HOM05D003791 ORTHO05D004961 3.1e-12 75.5 75 48.0
QL03p064651 Quercus lobata HOM05D003791 ORTHO05D004961 6.9e-12 74.3 79 45.6
Rhsim13G0102400 Rhododendron simsii HOM05D003791 ORTHO05D004961 9.0e-12 73.9 79 46.8
Thecc.09G295700 Theobroma cacao HOM05D003791 ORTHO05D004961 2.6e-11 72.4 85 45.9
Duzib170G1073 Durio zibethinus HOM05D003791 ORTHO05D004961 3.4e-11 72.0 75 48.0
QL01p014586 Quercus lobata HOM05D003791 ORTHO05D004961 3.4e-11 72.0 84 45.2
GSVIVG01031443001 Vitis vinifera HOM05D003791 ORTHO05D004961 4.5e-11 71.6 84 44.0
Atru.chr3.3491 Acer truncatum HOM05D003791 ORTHO05D004961 7.6e-11 70.9 75 48.0
Phvul.011G088100 Phaseolus vulgaris HOM05D003791 ORTHO05D004961 9.9e-11 70.5 84 44.0
Gohir.A08G003200 Gossypium hirsutum HOM05D003791 ORTHO05D004961 1.3e-10 70.1 71 49.3
Lj3g0026116 Lotus japonicus HOM05D003791 ORTHO05D004961 1.7e-10 69.7 66 53.0
Cfa010128 Carpinus fangiana HOM05D003791 ORTHO05D004961 2.9e-10 68.9 80 46.2
DCAR_006140 Daucus carota HOM05D003791 ORTHO05D004961 2.9e-10 68.9 66 53.0
Lj1C215T10 Lonicera japonica HOM05D003791 ORTHO05D019539 2.9e-10 68.9 93 43.0
CANSAT64G0962 Cannabis sativa HOM05D003791 ORTHO05D004961 3.8e-10 68.6 76 48.7
Gorai.004G007900 Gossypium raimondii HOM05D003791 ORTHO05D004961 3.8e-10 68.6 71 49.3
COL.COLO4_19230 Corchorus olitorius HOM05D003791 ORTHO05D004961 4.9e-10 68.2 71 47.9
Hund00856 Selenicereus undatus HOM05D003791 ORTHO05D004961 4.9e-10 68.2 89 41.6
vmacro03244 Vaccinium macrocarpon HOM05D003791 ORTHO05D004961 4.9e-10 68.2 81 40.7
VMungo1127G0886 Vigna mungo HOM05D003791 ORTHO05D004961 4.9e-10 68.2 84 42.9
CSS0049530 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 8.4e-10 67.4 64 51.6
Cc01_g10100 Coffea canephora HOM05D003791 ORTHO05D004961 8.4e-10 67.4 93 41.9
Gohir.D08G013600 Gossypium hirsutum HOM05D003791 ORTHO05D004961 1.1e-09 67.0 90 43.3
Haze_23510 Corylus avellana HOM05D003791 ORTHO05D004961 1.4e-09 66.6 80 45.0
DCAR_018754 Daucus carota HOM05D003791 ORTHO05D004961 1.4e-09 66.6 88 42.0
Lalb_Chr22g0350471 Lupinus albus HOM05D003791 ORTHO05D004961 1.4e-09 66.6 65 52.3
Peaxi162Scf00114g00310 Petunia axillaris HOM05D003791 ORTHO05D004961 1.9e-09 66.2 89 42.7
CAN.G546.67 Capsicum annuum HOM05D003791 ORTHO05D004961 3.2e-09 65.5 77 46.8
Nitab4.5_0000173g0320 Nicotiana tabacum HOM05D003791 ORTHO05D004961 3.2e-09 65.5 81 45.7
Potri.009G002400 Populus trichocarpa HOM05D003791 ORTHO05D004961 3.2e-09 65.5 80 42.5
CiPaw.13G143800 Carya illinoinensis HOM05D003791 ORTHO05D004961 5.5e-09 64.7 78 43.6
ClCG00G003900 Citrullus lanatus HOM05D003791 ORTHO05D004961 5.5e-09 64.7 84 45.2
Glyma.12G083300 Glycine max HOM05D003791 ORTHO05D004961 5.5e-09 64.7 84 39.3
Lj3g0020816 Lotus japonicus HOM05D003791 ORTHO05D004961 5.5e-09 64.7 84 39.3
Nitab4.5_0004517g0020 Nicotiana tabacum HOM05D003791 ORTHO05D004961 5.5e-09 64.7 80 47.5
Solyc06g074740.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 5.5e-09 64.7 84 44.0
CiPaw.14G105700 Carya illinoinensis HOM05D003791 ORTHO05D004961 7.1e-09 64.3 83 38.6
Peaxi162Scf00150g00213 Petunia axillaris HOM05D003791 ORTHO05D004961 7.1e-09 64.3 66 51.5
Glyma.11G191000 Glycine max HOM05D003791 ORTHO05D004961 9.3e-09 63.9 79 40.5
Sabra04G0148600 Salix brachista HOM05D003791 ORTHO05D004961 9.3e-09 63.9 78 43.6
Actinidia24158 Actinidia chinensis HOM05D003791 ORTHO05D004961 1.2e-08 63.5 57 52.6
CAN.G1432.22 Capsicum annuum HOM05D003791 ORTHO05D004961 1.2e-08 63.5 86 43.0
EL10Ac9g20994 Beta vulgaris HOM05D003791 ORTHO05D004961 1.6e-08 63.2 84 36.9
Gohir.A09G087400 Gossypium hirsutum HOM05D003791 ORTHO05D004961 2.1e-08 62.8 68 48.5
Gohir.D09G087100 Gossypium hirsutum HOM05D003791 ORTHO05D004961 2.1e-08 62.8 68 48.5
Gorai.006G103500 Gossypium raimondii HOM05D003791 ORTHO05D004961 2.1e-08 62.8 68 48.5
Lalb_Chr03g0027821 Lupinus albus HOM05D003791 ORTHO05D004961 2.7e-08 62.4 85 42.4
Oeu035522.1 Olea europaea HOM05D003791 ORTHO05D004961 2.7e-08 62.4 79 41.8
TAR369G0287 Trochodendron aralioides HOM05D003791 ORTHO05D004961 2.7e-08 62.4 74 41.9
Manes.04G011800 Manihot esculenta HOM05D003791 ORTHO05D004961 3.5e-08 62.0 62 48.4
Manes.11G154100 Manihot esculenta HOM05D003791 ORTHO05D004961 3.5e-08 62.0 63 44.4
TPR.G35046 Trifolium pratense HOM05D003791 ORTHO05D004961 3.5e-08 62.0 84 40.5
Prupe.6G114800 Prunus persica HOM05D003791 ORTHO05D004961 4.6e-08 61.6 69 50.7
Solyc11g066560.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 4.6e-08 61.6 70 50.0
Eucgr.B03911 Eucalyptus grandis HOM05D003791 ORTHO05D004961 6.0e-08 61.2 74 39.2
Ah.01g004870 Amaranthus hybridus HOM05D003791 ORTHO05D004961 7.9e-08 60.8 61 44.3
MELO3C004827.2 Cucumis melo HOM05D003791 ORTHO05D004961 7.9e-08 60.8 81 44.4
Potri.001G212700 Populus trichocarpa HOM05D003791 ORTHO05D004961 1.0e-07 60.5 66 43.9
CSS0014729 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.8e-07 59.7 56 46.4
MD03G1129800 Malus domestica HOM05D003791 ORTHO05D004961 2.3e-07 59.3 85 41.2
Sopen11g026300 Solanum pennellii HOM05D003791 ORTHO05D004961 2.3e-07 59.3 70 48.6
Sopen06g031150 Solanum pennellii HOM05D003791 ORTHO05D004961 3.0e-07 58.9 84 40.5
CsaV3_1G014360 Cucumis sativus L. HOM05D003791 ORTHO05D004961 3.9e-07 58.5 81 43.2
CARHR008020 Cardamine hirsuta HOM05D003791 ORTHO05D004961 5.1e-07 58.2 85 37.6
AUR62024040 Chenopodium quinoa HOM05D003791 ORTHO05D004961 5.1e-07 58.2 82 34.1
AUR62040427 Chenopodium quinoa HOM05D003791 ORTHO05D019539 5.1e-07 58.2 82 34.1
Thhalv10006697m.g Eutrema salsugineum HOM05D003791 ORTHO05D004961 5.1e-07 58.2 71 40.8
FvH4_3g30370 Fragaria vesca HOM05D003791 ORTHO05D004961 5.1e-07 58.2 56 48.2
FAN11G2854 Fragaria x ananassa HOM05D003791 ORTHO05D004961 5.1e-07 58.2 56 48.2
FAN21G1169 Fragaria x ananassa HOM05D003791 ORTHO05D004961 5.1e-07 58.2 56 48.2
FAN21G3702 Fragaria x ananassa HOM05D003791 ORTHO05D004961 5.1e-07 58.2 56 48.2
MD11G1151700 Malus domestica HOM05D003791 ORTHO05D004961 6.7e-07 57.8 84 41.7
CDE09G0630 Ceratophyllum demersum HOM05D003791 ORTHO05D004961 8.7e-07 57.4 50 52.0
Psat7g191520 Pisum sativum HOM05D003791 ORTHO05D004961 8.7e-07 57.4 86 45.3
Aqoxy1G01033 Aquilegia oxysepala HOM05D003791 ORTHO05D004961 1.1e-06 57.0 58 44.8
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea HOM05D003791 ORTHO05D004961 1.1e-06 57.0 66 48.5
Migut.N02533 Erythranthe guttata HOM05D003791 ORTHO05D004961 1.1e-06 57.0 78 41.0
Medtr4g056480 Medicago truncatula HOM05D003791 ORTHO05D004961 1.1e-06 57.0 84 40.5
PGR102G1149 Punica granatum HOM05D003791 ORTHO05D004961 1.1e-06 57.0 58 48.3
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea HOM05D003791 ORTHO05D004961 1.5e-06 56.6 66 48.5
AL1G18600 Arabidopsis lyrata HOM05D003791 ORTHO05D004961 1.9e-06 56.2 62 45.2
FAN16G1431 Fragaria x ananassa HOM05D003791 ORTHO05D004961 1.9e-06 56.2 56 46.4
RcHm_v2.0_Chr5g0056311 Rosa chinensis HOM05D003791 ORTHO05D004961 1.9e-06 56.2 54 48.1
Sp1g06840 Schrenkiella parvula HOM05D003791 ORTHO05D004961 1.9e-06 56.2 71 38.0
SGA_v2.0_scaffold83G26445 Striga asiatica HOM05D003791 ORTHO05D004961 3.3e-06 55.5 82 39.0
AT1G08190 Arabidopsis thaliana HOM05D003791 ORTHO05D004961 4.3e-06 55.1 72 38.9
Ah.09g226470 Amaranthus hybridus HOM05D003791 ORTHO05D019539 5.6e-06 54.7 54 42.6
Ah.13g066400 Amaranthus hybridus HOM05D003791 ORTHO05D019539 5.6e-06 54.7 58 39.7
BolC5t29388H Brassica oleracea HOM05D003791 ORTHO05D004961 5.6e-06 54.7 68 38.2
Carub.0001s0755 Capsella rubella HOM05D003791 ORTHO05D004961 5.6e-06 54.7 67 37.3
PSO063G7392 Papaver somniferum HOM05D003791 ORTHO05D004961 9.6e-06 53.9 51 49.0


User provided reference genes

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