Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0333861 Helianthus annuus HOM05D000924 ORTHO05D038057 1.4e-128 463.0 232 100.0
HanXRQChr05g0157291 Helianthus annuus HOM05D000924 ORTHO05D001209 2.4e-85 319.3 166 95.2
Lsat_1_v5_gn_5_22540 Lactuca sativa HOM05D000924 ORTHO05D001209 1.1e-64 250.8 170 76.5
Dinv17404 Davidia involucrata HOM05D000924 ORTHO05D001209 1.5e-47 193.7 171 59.1
Hma1.2p1_0060F.1_g033190 Hydrangea macrophylla HOM05D000924 ORTHO05D001209 3.5e-44 182.6 185 54.6
vmacro17603 Vaccinium macrocarpon HOM05D000924 ORTHO05D001209 3.5e-44 182.6 173 56.6
Rhsim08G0146700 Rhododendron simsii HOM05D000924 ORTHO05D001209 7.9e-44 181.4 173 57.2
Lj5C103G8 Lonicera japonica HOM05D000924 ORTHO05D001209 2.3e-43 179.9 172 57.0
Potri.015G056501 Populus trichocarpa HOM05D000924 ORTHO05D001209 3.0e-43 179.5 172 57.0
Cpa.g.sc94.44 Carica papaya HOM05D000924 ORTHO05D001209 8.7e-43 177.9 173 54.9
DCAR_011555 Daucus carota HOM05D000924 ORTHO05D001209 3.3e-42 176.0 172 55.8
GSVIVG01007875001 Vitis vinifera HOM05D000924 ORTHO05D001209 3.3e-42 176.0 172 56.4
Ciclev10020262m.g Citrus clementina HOM05D000924 ORTHO05D001209 5.6e-42 175.3 173 54.9
SGA_v2.0_scaffold7G04039 Striga asiatica HOM05D000924 ORTHO05D001209 3.7e-41 172.6 170 55.3
Manes.06G085400 Manihot esculenta HOM05D000924 ORTHO05D001209 6.2e-41 171.8 174 55.2
Cfa019322 Carpinus fangiana HOM05D000924 ORTHO05D001209 8.1e-41 171.4 173 52.6
Thecc.03G100600 Theobroma cacao HOM05D000924 ORTHO05D001209 8.1e-41 171.4 171 54.4
COL.COLO4_06749 Corchorus olitorius HOM05D000924 ORTHO05D001209 1.1e-40 171.0 171 54.4
QL10p019292 Quercus lobata HOM05D000924 ORTHO05D001209 1.8e-40 170.2 171 55.0
Prupe.4G035000 Prunus persica HOM05D000924 ORTHO05D001209 5.3e-40 168.7 172 52.3
Atru.chr9.419 Acer truncatum HOM05D000924 ORTHO05D001209 6.9e-40 168.3 172 52.3
MD06G1201900 Malus domestica HOM05D000924 ORTHO05D001209 2.0e-39 166.8 172 55.2
TWI60G0107 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 2.0e-39 166.8 172 55.2
Oeu031662.3 Olea europaea HOM05D000924 ORTHO05D001209 2.6e-39 166.4 171 54.4
CSS0043185 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 4.5e-39 165.6 172 53.5
TAR622G0150 Trochodendron aralioides HOM05D000924 ORTHO05D001209 5.8e-39 165.2 173 53.8
CSS0010952 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 1.7e-38 163.7 172 52.9
Gohir.A12G182100 Gossypium hirsutum HOM05D000924 ORTHO05D001209 1.7e-38 163.7 172 51.7
Gohir.D12G185001 Gossypium hirsutum HOM05D000924 ORTHO05D001209 4.9e-38 162.2 172 51.2
Gorai.008G198400 Gossypium raimondii HOM05D000924 ORTHO05D001209 4.9e-38 162.2 172 51.2
Eucgr.B00583 Eucalyptus grandis HOM05D000924 ORTHO05D001209 8.4e-38 161.4 171 49.7
EL10Ac5g11118 Beta vulgaris HOM05D000924 ORTHO05D001209 2.4e-37 159.8 172 53.5
Duzib205G0140 Durio zibethinus HOM05D000924 ORTHO05D001209 2.4e-37 159.8 172 51.2
FvH4_5g13990 Fragaria vesca HOM05D000924 ORTHO05D001209 3.2e-37 159.5 171 52.0
FAN18G1430 Fragaria x ananassa HOM05D000924 ORTHO05D001209 3.2e-37 159.5 171 52.0
AUR62021574 Chenopodium quinoa HOM05D000924 ORTHO05D001209 5.5e-37 158.7 174 52.3
AUR62008516 Chenopodium quinoa HOM05D000924 ORTHO05D001209 7.1e-37 158.3 176 51.1
Migut.D01699 Erythranthe guttata HOM05D000924 ORTHO05D001209 9.3e-37 157.9 172 51.7
MBI16_g05786_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D001209 1.2e-36 157.5 167 52.7
FAN08G2399 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.6e-36 157.1 171 51.5
Thhalv10003505m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 2.1e-36 156.8 168 51.8
Nitab4.5_0001328g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 2.1e-36 156.8 170 53.5
Peaxi162Scf00013g00069 Petunia axillaris HOM05D000924 ORTHO05D001209 2.1e-36 156.8 171 53.2
RcHm_v2.0_Chr7g0182981 Rosa chinensis HOM05D000924 ORTHO05D001209 2.1e-36 156.8 171 51.5
MSTRG.4451 Avicennia marina HOM05D000924 ORTHO05D001209 3.5e-36 156.0 171 51.5
CARHR274830 Cardamine hirsuta HOM05D000924 ORTHO05D001209 3.5e-36 156.0 168 51.8
AL8G37790 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 4.6e-36 155.6 168 52.4
CAN.G587.45 Capsicum annuum HOM05D000924 ORTHO05D001209 4.6e-36 155.6 171 51.5
THA.LOC104818343 Tarenaya hassleriana HOM05D000924 ORTHO05D001209 4.6e-36 155.6 169 53.8
CANSAT80G0652 Cannabis sativa HOM05D000924 ORTHO05D001209 6.0e-36 155.2 173 49.7
SalBow7G1805 Salvia bowleyana HOM05D000924 ORTHO05D001209 6.0e-36 155.2 177 52.0
Carub.0008s2181 Capsella rubella HOM05D000924 ORTHO05D001209 7.9e-36 154.8 168 52.4
Lj1g0003461 Lotus japonicus HOM05D000924 ORTHO05D001209 7.9e-36 154.8 170 50.6
AT5G61140 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 1.0e-35 154.5 168 52.4
Glyma.06G202500 Glycine max HOM05D000924 ORTHO05D001209 1.0e-35 154.5 167 53.3
Haze_07712 Corylus avellana HOM05D000924 ORTHO05D001209 1.3e-35 154.1 157 51.6
PGR083G0994 Punica granatum HOM05D000924 ORTHO05D001209 1.8e-35 153.7 172 47.1
Sc03g0008290 Simmondsia chinensis HOM05D000924 ORTHO05D001209 2.3e-35 153.3 170 51.8
PSO478G0555 Papaver somniferum HOM05D000924 ORTHO05D001209 3.0e-35 152.9 182 48.9
Aqoxy3G03623 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 3.9e-35 152.5 172 48.3
Aqoxy523s001 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 3.9e-35 152.5 172 48.3
Cc00_g02560 Coffea canephora HOM05D000924 ORTHO05D001209 5.1e-35 152.1 170 51.8
Sp2g24390 Schrenkiella parvula HOM05D000924 ORTHO05D001209 5.1e-35 152.1 168 51.8
Solyc06g069480.3 Solanum lycopersicum HOM05D000924 ORTHO05D001209 5.1e-35 152.1 172 53.5
MELO3C002023.2 Cucumis melo HOM05D000924 ORTHO05D001209 8.7e-35 151.4 174 47.7
Nn4g23416 Nelumbo nucifera HOM05D000924 ORTHO05D001209 8.7e-35 151.4 172 47.1
VMungo1309G1347 Vigna mungo HOM05D000924 ORTHO05D001209 1.1e-34 151.0 167 51.5
Sopen06g026770 Solanum pennellii HOM05D000924 ORTHO05D001209 1.5e-34 150.6 171 52.6
Hund09903 Selenicereus undatus HOM05D000924 ORTHO05D001209 1.9e-34 150.2 171 52.6
Hund09904 Selenicereus undatus HOM05D000924 ORTHO05D001209 1.9e-34 150.2 171 52.6
TPR.G12162 Trifolium pratense HOM05D000924 ORTHO05D001209 1.9e-34 150.2 170 50.0
ClCG04G011840 Citrullus lanatus HOM05D000924 ORTHO05D001209 3.3e-34 149.4 174 47.7
Ca_26749_v3 Cicer arietinum L. HOM05D000924 ORTHO05D001209 4.3e-34 149.1 170 49.4
PSO017G0961 Papaver somniferum HOM05D000924 ORTHO05D001209 4.3e-34 149.1 182 48.4
CsaV3_1G005930 Cucumis sativus L. HOM05D000924 ORTHO05D001209 7.4e-34 148.3 174 46.0
Medtr3g025300 Medicago truncatula HOM05D000924 ORTHO05D001209 9.6e-34 147.9 170 49.4
Sed0023477 Sechium edule HOM05D000924 ORTHO05D001209 1.6e-33 147.1 165 49.1
BolC2t12187H Brassica oleracea HOM05D000924 ORTHO05D001209 2.1e-33 146.7 168 51.2
Lalb_Chr14g0362841 Lupinus albus HOM05D000924 ORTHO05D001209 3.7e-33 146.0 169 49.7
A02p41450 Brassica napus HOM05D000924 ORTHO05D001209 4.8e-33 145.6 168 50.6
C02p61380 Brassica napus HOM05D000924 ORTHO05D001209 4.8e-33 145.6 168 50.6
BraA02t09087Z Brassica rapa HOM05D000924 ORTHO05D001209 6.2e-33 145.2 168 50.6
Phvul.009G192100 Phaseolus vulgaris HOM05D000924 ORTHO05D001209 6.2e-33 145.2 169 49.1
Aa31LG11G2210 Aethionema arabicum HOM05D000924 ORTHO05D001209 8.2e-33 144.8 168 50.6
arahy.Tifrunner.gnm1.ann1.QJ15ZQ Arachis hypogaea HOM05D000924 ORTHO05D001209 8.2e-33 144.8 170 49.4
arahy.Tifrunner.gnm1.ann1.TAYI6X Arachis hypogaea HOM05D000924 ORTHO05D001209 8.2e-33 144.8 170 48.8
Ah.11g047880 Amaranthus hybridus HOM05D000924 ORTHO05D001209 1.2e-31 141.0 171 50.3
Aqoxy4G02207 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 2.5e-29 133.3 202 40.6
CDE06G1554 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 1.0e-27 127.9 171 43.3
Zm00001eb400270 Zea mays HOM05D000924 ORTHO05D001209 9.0e-24 114.8 179 43.0
ATR0064G009 Amborella trichopoda HOM05D000924 ORTHO05D001209 1.2e-23 114.4 172 44.2
Actinidia25776 Actinidia chinensis HOM05D000924 ORTHO05D001209 8.8e-19 98.2 165 40.6
Actinidia09601 Actinidia chinensis HOM05D000924 ORTHO05D038057 5.1e-11 72.4 137 38.7
Actinidia16120 Actinidia chinensis HOM05D000924 ORTHO05D056428 1.5e-10 70.9 44 75.0
HPP92_009485 Vanilla planifolia HOM05D000924 ORTHO05D001209 2.6e-10 70.1 88 45.5
Pp3c2_9850 Physcomitrium patens HOM05D000924 ORTHO05D001209 1.3e-09 67.8 189 30.2
Mapoly0046s0099 Marchantia polymorpha HOM05D000924 ORTHO05D001209 2.2e-09 67.0 63 47.6
AagrBONN_evm.TU.Sc2ySwM_228.4663 Anthoceros agrestis HOM05D000924 ORTHO05D001209 5.3e-08 62.4 195 26.7
CiPaw.11G052300 Carya illinoinensis HOM05D000924 ORTHO05D001209 5.3e-08 62.4 37 78.4
SMO116G0141 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 7.7e-07 58.5 120 34.2
SMO195G0012 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 1.7e-06 57.4 120 31.7


User provided reference genes

Program Settings