Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0324541 Helianthus annuus HOM05D004874 ORTHO05D006796 1.5e-49 199.1 98 100.0
HanXRQChr14g0446191 Helianthus annuus HOM05D004874 ORTHO05D006796 1.7e-32 142.5 78 88.5
Lsat_1_v5_gn_2_65401 Lactuca sativa HOM05D004874 ORTHO05D006796 3.2e-31 138.3 78 83.3
ECA238G3208 Erigeron canadensis HOM05D004874 ORTHO05D006796 7.9e-30 133.7 78 80.8
HanXRQChr10g0295251 Helianthus annuus HOM05D004874 ORTHO05D006796 1.4e-29 132.9 81 79.0
Dinv19497 Davidia involucrata HOM05D004874 ORTHO05D006796 2.8e-27 125.2 78 73.1
Atru.chr4.387 Acer truncatum HOM05D004874 ORTHO05D006796 4.8e-27 124.4 78 73.1
Actinidia15577 Actinidia chinensis HOM05D004874 ORTHO05D006796 4.8e-27 124.4 78 71.8
CSS0002284 Camellia sinensis var. sinensis HOM05D004874 ORTHO05D006796 4.8e-27 124.4 78 71.8
CSS0018271 Camellia sinensis var. sinensis HOM05D004874 ORTHO05D006796 4.8e-27 124.4 78 71.8
Oeu030684.1 Olea europaea HOM05D004874 ORTHO05D006796 6.3e-27 124.0 78 71.8
CiPaw.04G092800 Carya illinoinensis HOM05D004874 ORTHO05D006796 8.2e-27 123.6 78 70.5
Rhsim10G0151300 Rhododendron simsii HOM05D004874 ORTHO05D006796 1.1e-26 123.2 78 71.8
Thecc.01G111200 Theobroma cacao HOM05D004874 ORTHO05D006796 1.1e-26 123.2 78 73.1
Ciclev10024728m.g Citrus clementina HOM05D004874 ORTHO05D006796 1.4e-26 122.9 78 70.5
PGSC0003DMG400012951 Solanum tuberosum HOM05D004874 ORTHO05D006796 1.4e-26 122.9 78 71.8
Gohir.A10G086600 Gossypium hirsutum HOM05D004874 ORTHO05D006796 1.8e-26 122.5 78 71.8
Gohir.D10G102100 Gossypium hirsutum HOM05D004874 ORTHO05D006796 1.8e-26 122.5 78 71.8
Lj2A562T49 Lonicera japonica HOM05D004874 ORTHO05D006796 1.8e-26 122.5 75 78.7
MD15G1333600 Malus domestica HOM05D004874 ORTHO05D006796 1.8e-26 122.5 78 70.5
Peaxi162Scf00323g00112 Petunia axillaris HOM05D004874 ORTHO05D006796 1.8e-26 122.5 78 71.8
Potri.007G081900 Populus trichocarpa HOM05D004874 ORTHO05D006796 1.8e-26 122.5 78 70.5
Haze_25029 Corylus avellana HOM05D004874 ORTHO05D006796 2.4e-26 122.1 78 69.2
Duzib147G0760 Durio zibethinus HOM05D004874 ORTHO05D006796 2.4e-26 122.1 78 71.8
Eucgr.H04838 Eucalyptus grandis HOM05D004874 ORTHO05D006796 2.4e-26 122.1 78 73.1
Gorai.011G111800 Gossypium raimondii HOM05D004874 ORTHO05D006796 2.4e-26 122.1 78 70.5
SalBow6G4347 Salvia bowleyana HOM05D004874 ORTHO05D006796 3.1e-26 121.7 78 70.5
CANSAT01G0647 Cannabis sativa HOM05D004874 ORTHO05D006796 4.1e-26 121.3 78 69.2
CARHR113090 Cardamine hirsuta HOM05D004874 ORTHO05D006796 4.1e-26 121.3 78 71.8
DCAR_014257 Daucus carota HOM05D004874 ORTHO05D006796 4.1e-26 121.3 78 70.5
Solyc04g054140.4 Solanum lycopersicum HOM05D004874 ORTHO05D006796 4.1e-26 121.3 78 70.5
Sopen04g023580 Solanum pennellii HOM05D004874 ORTHO05D006796 4.1e-26 121.3 78 70.5
PSO541G0735 Papaver somniferum HOM05D004874 ORTHO05D006796 5.3e-26 120.9 78 65.4
Potri.005G083800 Populus trichocarpa HOM05D004874 ORTHO05D006796 5.3e-26 120.9 78 70.5
QL06p032401 Quercus lobata HOM05D004874 ORTHO05D006796 5.3e-26 120.9 78 69.2
Aa31LG7G14640 Aethionema arabicum HOM05D004874 ORTHO05D006796 7.0e-26 120.6 76 73.7
GSVIVG01022217001 Vitis vinifera HOM05D004874 ORTHO05D006796 7.0e-26 120.6 78 69.2
Carub.0004s0115 Capsella rubella HOM05D004874 ORTHO05D006796 9.1e-26 120.2 76 72.4
Lalb_Chr11g0068041 Lupinus albus HOM05D004874 ORTHO05D006796 9.1e-26 120.2 78 69.2
MD01G1017400 Malus domestica HOM05D004874 ORTHO05D006796 9.1e-26 120.2 78 67.9
PSO675G8458 Papaver somniferum HOM05D004874 ORTHO05D006796 9.1e-26 120.2 78 65.4
Manes.12G141800 Manihot esculenta HOM05D004874 ORTHO05D006796 1.2e-25 119.8 78 67.9
AT2G22010 Arabidopsis thaliana HOM05D004874 ORTHO05D006796 1.5e-25 119.4 76 72.4
Thhalv10000015m.g Eutrema salsugineum HOM05D004874 ORTHO05D006796 1.5e-25 119.4 76 72.4
Nitab4.5_0000156g0190 Nicotiana tabacum HOM05D004874 ORTHO05D006796 1.5e-25 119.4 78 70.5
Sabra05G0068900 Salix brachista HOM05D004874 ORTHO05D006796 1.5e-25 119.4 81 69.1
TAR376G0110 Trochodendron aralioides HOM05D004874 ORTHO05D006796 1.5e-25 119.4 78 67.9
BcaB08g35028 Brassica carinata HOM05D004874 ORTHO05D006796 2.0e-25 119.0 76 71.1
BcaC07g41106 Brassica carinata HOM05D004874 ORTHO05D006796 2.0e-25 119.0 76 71.1
A09p57840 Brassica napus HOM05D004874 ORTHO05D006796 2.0e-25 119.0 76 71.1
C08p41080 Brassica napus HOM05D004874 ORTHO05D006796 2.0e-25 119.0 76 71.1
BolC8t51674H Brassica oleracea HOM05D004874 ORTHO05D006796 2.0e-25 119.0 76 71.1
BraA09t41177Z Brassica rapa HOM05D004874 ORTHO05D006796 2.0e-25 119.0 76 71.1
Cc07_g16070 Coffea canephora HOM05D004874 ORTHO05D006796 2.6e-25 118.6 78 69.2
FAN23G3027 Fragaria x ananassa HOM05D004874 ORTHO05D006796 2.6e-25 118.6 78 69.2
Glyma.04G220000 Glycine max HOM05D004874 ORTHO05D006796 2.6e-25 118.6 78 67.9
Hund19660 Selenicereus undatus HOM05D004874 ORTHO05D006796 2.6e-25 118.6 78 71.8
AL4G11330 Arabidopsis lyrata HOM05D004874 ORTHO05D006796 3.5e-25 118.2 76 71.1
Glyma.06G145900 Glycine max HOM05D004874 ORTHO05D006796 3.5e-25 118.2 78 67.9
Manes.13G077640 Manihot esculenta HOM05D004874 ORTHO05D006796 3.5e-25 118.2 78 69.2
Phvul.009G140100 Phaseolus vulgaris HOM05D004874 ORTHO05D006796 3.5e-25 118.2 78 67.9
RcHm_v2.0_Chr2g0116231 Rosa chinensis HOM05D004874 ORTHO05D006796 3.5e-25 118.2 78 69.2
MSTRG.2539 Avicennia marina HOM05D004874 ORTHO05D006796 4.5e-25 117.9 76 69.7
Prupe.6G174100 Prunus persica HOM05D004874 ORTHO05D006796 4.5e-25 117.9 78 66.7
SGA_v2.0_scaffold2G01299 Striga asiatica HOM05D004874 ORTHO05D006796 4.5e-25 117.9 76 69.7
EL10Ac6g14746 Beta vulgaris HOM05D004874 ORTHO05D006796 5.9e-25 117.5 79 68.4
HanXRQChr11g0341101 Helianthus annuus HOM05D004874 ORTHO05D006796 5.9e-25 117.5 59 96.6
Nn5g28922 Nelumbo nucifera HOM05D004874 ORTHO05D006796 7.7e-25 117.1 78 66.7
Sp4g01070 Schrenkiella parvula HOM05D004874 ORTHO05D006796 7.7e-25 117.1 76 71.1
FvH4_1g22150 Fragaria vesca HOM05D004874 ORTHO05D006796 1.0e-24 116.7 78 67.9
FAN03G2613 Fragaria x ananassa HOM05D004874 ORTHO05D006796 1.0e-24 116.7 78 67.9
FAN26G2351 Fragaria x ananassa HOM05D004874 ORTHO05D006796 1.0e-24 116.7 78 67.9
Lalb_Chr13g0296191 Lupinus albus HOM05D004874 ORTHO05D006796 1.3e-24 116.3 78 69.2
Migut.H02425 Erythranthe guttata HOM05D004874 ORTHO05D006796 1.7e-24 115.9 76 68.4
FAN01G2715 Fragaria x ananassa HOM05D004874 ORTHO05D006796 1.7e-24 115.9 78 67.9
TWI74G1507 Tripterygium wilfordii HOM05D004874 ORTHO05D006796 1.7e-24 115.9 78 67.9
TAR628G0415 Trochodendron aralioides HOM05D004874 ORTHO05D006796 1.7e-24 115.9 81 65.4
FAN28G2703 Fragaria x ananassa HOM05D004874 ORTHO05D006796 2.2e-24 115.5 78 66.7
VMungo1309G2704 Vigna mungo HOM05D004874 ORTHO05D006796 2.2e-24 115.5 78 66.7
FAN19G0866 Fragaria x ananassa HOM05D004874 ORTHO05D006796 2.9e-24 115.2 78 66.7
PGR102G1404 Punica granatum HOM05D004874 ORTHO05D006796 2.9e-24 115.2 78 67.9
CDE07G0820 Ceratophyllum demersum HOM05D004874 ORTHO05D006796 3.8e-24 114.8 78 66.7
Oeu028379.4 Olea europaea HOM05D004874 ORTHO05D006796 3.8e-24 114.8 73 72.6
CAN.G1728.1 Capsicum annuum HOM05D004874 ORTHO05D006796 5.0e-24 114.4 78 66.7
ClCG01G016180 Citrullus lanatus HOM05D004874 ORTHO05D006796 5.0e-24 114.4 78 66.7
ATR0564G436 Amborella trichopoda HOM05D004874 ORTHO05D006796 6.5e-24 114.0 78 65.4
arahy.Tifrunner.gnm1.ann1.M2IALY Arachis hypogaea HOM05D004874 ORTHO05D006796 6.5e-24 114.0 78 67.9
arahy.Tifrunner.gnm1.ann1.ZQBN5H Arachis hypogaea HOM05D004874 ORTHO05D006796 6.5e-24 114.0 78 67.9
FAN10G0201 Fragaria x ananassa HOM05D004874 ORTHO05D006796 6.5e-24 114.0 78 65.4
THA.LOC104804146 Tarenaya hassleriana HOM05D004874 ORTHO05D006796 6.5e-24 114.0 76 65.8
FAN06G3019 Fragaria x ananassa HOM05D004874 ORTHO05D006796 8.5e-24 113.6 78 65.4
unitig_899.g14600 Utricularia gibba HOM05D004874 ORTHO05D006796 1.1e-23 113.2 76 67.1
Medtr3g094770 Medicago truncatula HOM05D004874 ORTHO05D006796 1.9e-23 112.5 78 65.4
TPR.G23744 Trifolium pratense HOM05D004874 ORTHO05D006796 1.9e-23 112.5 78 65.4
HPP92_016848 Vanilla planifolia HOM05D004874 ORTHO05D006796 1.9e-23 112.5 78 62.8
Psat5g065960 Pisum sativum HOM05D004874 ORTHO05D006796 2.5e-23 112.1 78 65.4
CsaV3_6G042450 Cucumis sativus L. HOM05D004874 ORTHO05D006796 4.2e-23 111.3 78 65.4
Lj1g0000337 Lotus japonicus HOM05D004874 ORTHO05D006796 4.2e-23 111.3 78 65.4
Zm00001eb328050 Zea mays HOM05D004874 ORTHO05D006796 9.4e-23 110.2 78 60.3
Aqoxy6G00493 Aquilegia oxysepala HOM05D004874 ORTHO05D006796 1.2e-22 109.8 78 64.1
Ca_16889_v3 Cicer arietinum L. HOM05D004874 ORTHO05D006796 1.2e-22 109.8 78 62.8
SEGI_33214 Sequoiadendron giganteum HOM05D004874 ORTHO05D006796 2.1e-22 109.0 78 62.8
FAN06G4447 Fragaria x ananassa HOM05D004874 ORTHO05D006796 4.7e-22 107.8 75 65.3
Pp3c17_14550 Physcomitrium patens HOM05D004874 ORTHO05D006796 4.7e-22 107.8 78 61.5
AagrBONN_evm.TU.Sc2ySwM_228.911 Anthoceros agrestis HOM05D004874 ORTHO05D006796 1.8e-21 105.9 78 60.3
Pp3c1_33900 Physcomitrium patens HOM05D004874 ORTHO05D006796 6.7e-21 104.0 78 60.3
SMO143G0116 Selaginella moellendorffii HOM05D004874 ORTHO05D006796 2.6e-20 102.1 82 53.7
Pp3c2_2760 Physcomitrium patens HOM05D004874 ORTHO05D006796 5.7e-20 100.9 78 59.0
Mapoly0047s0138 Marchantia polymorpha HOM05D004874 ORTHO05D006796 7.4e-20 100.5 79 60.8
MELO3C007488.2 Cucumis melo HOM05D004874 ORTHO05D006796 1.7e-19 99.4 67 68.7
CBR_g4334 Chara braunii HOM05D004874 ORTHO05D006796 7.2e-15 84.0 72 54.2
HanXRQChr12g0385291 Helianthus annuus HOM05D004874 ORTHO05D006796 9.4e-15 83.6 42 95.2
Sabra07G0068700 Salix brachista HOM05D004874 ORTHO05D006796 4.0e-13 78.2 134 35.8
Sed0015455 Sechium edule HOM05D004874 ORTHO05D006796 2.2e-11 72.4 68 55.9
AUR62003312 Chenopodium quinoa HOM05D004874 ORTHO05D006796 8.3e-11 70.5 48 66.7
AUR62016271 Chenopodium quinoa HOM05D004874 ORTHO05D006796 8.3e-11 70.5 48 66.7
Ah.02g124400 Amaranthus hybridus HOM05D004874 ORTHO05D006796 7.0e-10 67.4 47 63.8


User provided reference genes

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