Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 3.1e-215 751.5 375 100.0
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 4.4e-153 545.0 386 73.8
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 8.3e-144 514.2 383 71.5
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 2.0e-134 483.0 380 65.3
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 1.7e-128 463.4 383 62.9
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 1.3e-125 453.8 384 60.9
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 1.6e-123 446.8 384 61.2
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 1.1e-122 444.1 376 62.5
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 2.3e-122 443.0 384 61.2
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 1.3e-120 437.2 378 60.1
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 3.7e-120 435.6 381 58.8
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 3.2e-119 432.6 385 59.5
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 1.2e-118 430.6 410 56.8
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 6.0e-118 428.3 379 58.6
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 7.8e-118 427.9 384 58.1
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 1.1e-116 424.1 372 59.7
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 1.5e-116 423.7 382 60.2
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 1.5e-116 423.7 382 58.1
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 3.3e-116 422.5 379 57.8
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 7.3e-116 421.4 379 58.0
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 7.3e-116 421.4 374 59.4
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 9.5e-116 421.0 372 59.7
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 2.8e-115 419.5 379 57.8
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 1.1e-114 417.5 379 57.3
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.1e-114 417.5 368 59.2
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.8e-114 416.8 372 58.9
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 1.8e-114 416.8 373 59.2
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 3.1e-114 416.0 382 58.9
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 6.8e-114 414.8 382 56.8
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 4.4e-113 412.1 382 56.8
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 3.7e-112 409.1 381 56.4
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 6.4e-112 408.3 375 58.4
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 3.2e-111 406.0 367 58.6
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 9.2e-111 404.4 384 54.9
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 1.2e-110 404.1 376 58.8
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 3.5e-110 402.5 357 58.8
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 3.5e-110 402.5 415 54.7
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 3.9e-109 399.1 369 58.5
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 5.1e-109 398.7 384 53.9
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 5.1e-109 398.7 380 56.6
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 6.6e-109 398.3 384 53.4
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 8.6e-109 397.9 388 54.6
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 1.5e-108 397.1 368 56.0
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 1.9e-108 396.7 367 55.9
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 4.3e-108 395.6 368 59.0
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 7.3e-108 394.8 375 56.0
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 1.2e-107 394.0 384 55.7
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 1.2e-107 394.0 353 58.9
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 2.8e-107 392.9 378 55.8
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 3.6e-107 392.5 372 55.1
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 4.7e-107 392.1 376 55.1
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 3.1e-106 389.4 368 57.1
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 4.0e-106 389.0 372 55.9
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 5.2e-106 388.7 370 55.7
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 6.8e-106 388.3 373 54.7
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 1.2e-105 387.5 370 55.7
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 2.0e-105 386.7 381 53.5
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 4.4e-105 385.6 388 52.1
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 6.4e-104 381.7 372 55.6
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.4e-103 380.6 371 55.0
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 1.2e-102 377.5 372 54.8
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 2.1e-102 376.7 382 51.8
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 3.5e-102 375.9 371 53.1
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 4.6e-102 375.6 377 52.3
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 6.0e-102 375.2 380 52.1
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 7.8e-102 374.8 380 52.1
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 7.8e-102 374.8 411 51.8
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 1.0e-101 374.4 353 56.7
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 2.3e-101 373.2 369 53.1
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 5.1e-101 372.1 371 53.4
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 1.1e-100 370.9 380 51.6
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 9.6e-100 367.9 369 53.1
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 1.3e-99 367.5 373 52.8
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 1.6e-99 367.1 371 52.8
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 4.8e-99 365.5 372 53.5
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 5.3e-98 362.1 369 51.8
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 1.5e-97 360.5 378 49.5
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 2.6e-97 359.8 372 51.9
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 4.4e-97 359.0 291 62.2
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 7.6e-97 358.2 371 55.0
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 7.6e-97 358.2 408 49.8
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 9.9e-97 357.8 382 50.5
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 4.9e-96 355.5 379 50.1
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 7.8e-94 348.2 404 50.5
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 7.8e-94 348.2 382 49.5
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 2.3e-93 346.7 393 50.9
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 1.5e-92 344.0 352 53.7
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 3.3e-92 342.8 294 61.6
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 1.6e-91 340.5 385 47.8
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 9.9e-89 331.3 369 49.3
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 6.0e-86 322.0 390 46.9
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 1.5e-81 307.4 400 46.0
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 1.9e-79 300.4 385 47.0
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 1.8e-77 293.9 351 47.3
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 1.5e-76 290.8 379 44.1
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 1.6e-75 287.3 373 45.6
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 2.4e-74 283.5 294 49.7
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 9.0e-74 281.6 315 49.2
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 5.5e-71 272.3 181 70.2
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 1.3e-59 234.6 386 37.3
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 7.9e-54 215.3 173 63.0
CANSAT56G4018 Cannabis sativa HOM05D006688 ORTHO05D008550 2.3e-45 187.2 217 48.4
Cpa.g.sc28.142 Carica papaya HOM05D006688 ORTHO05D008550 3.7e-43 179.9 151 58.9
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 4.8e-43 179.5 127 67.7
Ciclev10009794m.g Citrus clementina HOM05D006688 ORTHO05D008550 1.3e-40 171.4 148 58.8
Os09g0363600 Oryza sativa ssp. japonica HOM05D006688 ORTHO05D008550 2.1e-30 137.5 275 36.0
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 8.0e-30 135.6 138 48.6
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 5.7e-28 129.4 381 27.3
SEGI_08677 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 6.3e-27 125.9 129 48.1
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 5.7e-20 102.8 65 72.3
Cre03.g180200 Chlamydomonas reinhardtii HOM05D006688 ORTHO05D008550 7.0e-18 95.9 434 25.6
SEGI_12408 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 8.6e-16 89.0 95 45.3
COL.COLO4_27080 Corchorus olitorius HOM05D006688 ORTHO05D008550 1.7e-11 74.7 68 61.8
BcaB07g31609 Brassica carinata HOM05D006688 ORTHO05D008550 1.4e-10 71.6 119 39.5
QL04p074452 Quercus lobata HOM05D001335 ORTHO05D001184 1.5e-07 61.6 177 26.6
QL04p074409 Quercus lobata HOM05D001335 ORTHO05D001184 4.3e-07 60.1 136 28.7
Ca_23759_v3 Cicer arietinum L. HOM05D001335 ORTHO05D001184 7.3e-07 59.3 149 25.5
FAN10G1082 Fragaria x ananassa HOM05D001335 ORTHO05D001184 7.3e-07 59.3 166 24.1
QL04p074383 Quercus lobata HOM05D001335 ORTHO05D001184 7.3e-07 59.3 107 29.0
QL04p074394 Quercus lobata HOM05D001335 ORTHO05D001184 7.3e-07 59.3 107 29.0
Medtr8g032850 Medicago truncatula HOM05D001335 ORTHO05D001184 9.5e-07 58.9 160 25.0
QL10p022402 Quercus lobata HOM05D001335 ORTHO05D001184 9.5e-07 58.9 107 29.0
SEGI_34732 Sequoiadendron giganteum HOM05D001335 ORTHO05D001184 9.5e-07 58.9 88 29.5
Eucgr.E02834 Eucalyptus grandis HOM05D001335 ORTHO05D001184 1.2e-06 58.5 133 27.8
Eucgr.E02835 Eucalyptus grandis HOM05D001335 ORTHO05D001184 1.2e-06 58.5 133 27.1
QL04p074163 Quercus lobata HOM05D001335 ORTHO05D001184 1.2e-06 58.5 107 29.0
Atru.chr1.1507 Acer truncatum HOM05D001335 ORTHO05D001184 2.1e-06 57.8 102 29.4
A03p15940 Brassica napus HOM05D001335 ORTHO05D001184 2.1e-06 57.8 91 30.8
BraA03t10884Z Brassica rapa HOM05D001335 ORTHO05D001184 2.1e-06 57.8 91 30.8
Eucgr.E02828 Eucalyptus grandis HOM05D001335 ORTHO05D001184 2.8e-06 57.4 133 27.8
BcaB08g35553 Brassica carinata HOM05D001335 ORTHO05D001184 3.6e-06 57.0 91 30.8
Lalb_Chr01g0009081 Lupinus albus HOM05D001335 ORTHO05D001184 3.6e-06 57.0 112 30.4
Ca_25982_v3 Cicer arietinum L. HOM05D001335 ORTHO05D001184 6.2e-06 56.2 150 22.7
PSO210G3220 Papaver somniferum HOM05D001335 ORTHO05D001184 6.2e-06 56.2 132 25.0
BcaC01g06150 Brassica carinata HOM05D001335 ORTHO05D001184 8.1e-06 55.8 84 31.0
C03p18740 Brassica napus HOM05D001335 ORTHO05D001184 8.1e-06 55.8 84 31.0
BolC3t14265H Brassica oleracea HOM05D001335 ORTHO05D001184 8.1e-06 55.8 84 31.0


User provided reference genes

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