Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0309261 Helianthus annuus HOM05D007201 ORTHO05D009122 2.8e-209 731.9 414 100.0
Lsat_1_v5_gn_5_80700 Lactuca sativa HOM05D007201 ORTHO05D009122 8.1e-92 341.7 290 65.2
ECA234G1264 Erigeron canadensis HOM05D007201 ORTHO05D009122 8.7e-86 321.6 313 60.4
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.8e-84 316.6 313 60.1
Actinidia03796 Actinidia chinensis HOM05D007201 ORTHO05D009122 9.6e-77 291.6 291 59.8
Manes.02G222200 Manihot esculenta HOM05D007201 ORTHO05D009122 3.1e-75 286.6 288 55.2
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 1.0e-73 281.6 280 60.7
TAR626G0209 Trochodendron aralioides HOM05D007201 ORTHO05D009122 3.2e-72 276.6 292 55.1
CSS0027843 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 2.1e-71 273.9 294 56.1
Rhsim03G0269700 Rhododendron simsii HOM05D007201 ORTHO05D009122 1.3e-70 271.2 291 57.7
Lju50A20G7 Lonicera japonica HOM05D007201 ORTHO05D009122 1.8e-70 270.8 305 57.4
Atru.chr7.298 Acer truncatum HOM05D007201 ORTHO05D009122 3.0e-70 270.0 280 52.5
CsaV3_1G044360 Cucumis sativus L. HOM05D007201 ORTHO05D009122 8.7e-70 268.5 290 51.0
Cc06_g23490 Coffea canephora HOM05D007201 ORTHO05D009122 1.1e-69 268.1 290 58.6
MELO3C010035.2 Cucumis melo HOM05D007201 ORTHO05D009122 1.9e-69 267.3 290 51.0
Sabra06G0061200 Salix brachista HOM05D007201 ORTHO05D009122 3.3e-69 266.5 269 61.7
Cfa012872 Carpinus fangiana HOM05D007201 ORTHO05D009122 4.3e-69 266.2 297 52.2
Potri.006G081100 Populus trichocarpa HOM05D007201 ORTHO05D009122 1.6e-68 264.2 270 58.9
Nn8g41282 Nelumbo nucifera HOM05D007201 ORTHO05D009122 8.2e-68 261.9 287 56.4
CiPaw.15G000100 Carya illinoinensis HOM05D007201 ORTHO05D009122 1.4e-67 261.2 288 60.1
Ciclev10008517m.g Citrus clementina HOM05D007201 ORTHO05D009122 5.3e-67 259.2 270 52.2
MD04G1000600 Malus domestica HOM05D007201 ORTHO05D009122 2.0e-66 257.3 339 51.6
Haze_21242 Corylus avellana HOM05D007201 ORTHO05D009122 2.6e-66 256.9 298 51.3
Thecc.09G202300 Theobroma cacao HOM05D007201 ORTHO05D009122 3.4e-66 256.5 294 54.8
Gohir.D04G008200 Gossypium hirsutum HOM05D007201 ORTHO05D009122 7.6e-66 255.4 292 58.9
PSO339G5324 Papaver somniferum HOM05D007201 ORTHO05D009122 1.0e-65 255.0 274 55.1
Gorai.012G009900 Gossypium raimondii HOM05D007201 ORTHO05D009122 1.3e-65 254.6 278 56.1
Prupe.1G000600 Prunus persica HOM05D007201 ORTHO05D009122 1.3e-65 254.6 291 54.3
SHI24431 Sapria himalayana HOM05D007201 ORTHO05D009122 1.3e-65 254.6 279 53.0
Sc10g0006090 Simmondsia chinensis HOM05D007201 ORTHO05D009122 1.7e-65 254.2 293 52.2
PGSC0003DMG400002893 Solanum tuberosum HOM05D007201 ORTHO05D009122 5.0e-65 252.7 302 52.3
COL.COLO4_09000 Corchorus olitorius HOM05D007201 ORTHO05D009122 5.5e-64 249.2 296 53.0
RcHm_v2.0_Chr4g0384751 Rosa chinensis HOM05D007201 ORTHO05D009122 2.7e-63 246.9 293 48.1
QL11p005700 Quercus lobata HOM05D007201 ORTHO05D009122 6.1e-63 245.7 301 46.2
Psat7g169960 Pisum sativum HOM05D007201 ORTHO05D009122 7.9e-63 245.4 301 50.5
Solyc12g009390.2 Solanum lycopersicum HOM05D007201 ORTHO05D009122 1.0e-62 245.0 323 48.9
Hund22525 Selenicereus undatus HOM05D007201 ORTHO05D009122 1.3e-62 244.6 254 57.5
Eucgr.C00055 Eucalyptus grandis HOM05D007201 ORTHO05D009122 1.5e-61 241.1 298 55.0
FvH4_4g00131 Fragaria vesca HOM05D007201 ORTHO05D009122 1.9e-61 240.7 287 48.4
HPP92_017373 Vanilla planifolia HOM05D007201 ORTHO05D009122 3.7e-60 236.5 271 54.6
Peaxi162Scf00047g02450 Petunia axillaris HOM05D007201 ORTHO05D009122 4.8e-60 236.1 285 50.2
VMungo1127G0228 Vigna mungo HOM05D007201 ORTHO05D009122 8.2e-60 235.3 285 51.6
SGA_v2.0_scaffold21G09583 Striga asiatica HOM05D007201 ORTHO05D009122 1.1e-59 235.0 307 53.1
Phvul.011G018600 Phaseolus vulgaris HOM05D007201 ORTHO05D009122 2.4e-59 233.8 281 51.6
Aqoxy7G02518 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 3.4e-58 229.9 294 44.6
Cpa.g.sc46.114 Carica papaya HOM05D007201 ORTHO05D009122 3.4e-58 229.9 274 54.0
Lj3g0009807 Lotus japonicus HOM05D007201 ORTHO05D009122 5.9e-58 229.2 292 49.0
FAN12G0236 Fragaria x ananassa HOM05D007201 ORTHO05D009122 1.7e-57 227.6 300 44.7
AL2G35270 Arabidopsis lyrata HOM05D007201 ORTHO05D009122 2.2e-57 227.3 269 51.3
Carub.0002s2218 Capsella rubella HOM05D007201 ORTHO05D009122 8.5e-57 225.3 285 54.0
Glyma.11G109000 Glycine max HOM05D007201 ORTHO05D009122 1.9e-56 224.2 272 56.6
TPR.G28027 Trifolium pratense HOM05D007201 ORTHO05D009122 1.9e-56 224.2 352 43.8
ATR0626G320 Amborella trichopoda HOM05D007201 ORTHO05D009122 4.2e-56 223.0 331 43.2
Aqoxy37s001 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 4.2e-56 223.0 300 43.7
GSVIVG01034266001 Vitis vinifera HOM05D007201 ORTHO05D009122 2.1e-55 220.7 229 59.8
arahy.Tifrunner.gnm1.ann1.X4HTYC Arachis hypogaea HOM05D007201 ORTHO05D009122 2.7e-55 220.3 292 50.3
Sopen12g004380 Solanum pennellii HOM05D007201 ORTHO05D009122 2.7e-55 220.3 292 49.7
CARHR068690 Cardamine hirsuta HOM05D007201 ORTHO05D009122 4.6e-55 219.5 265 54.0
Sp5g30480 Schrenkiella parvula HOM05D007201 ORTHO05D009122 4.6e-55 219.5 248 55.6
vmacro22702 Vaccinium macrocarpon HOM05D007201 ORTHO05D009122 6.1e-55 219.2 337 40.7
CAN.G1591.3 Capsicum annuum HOM05D007201 ORTHO05D009122 7.9e-55 218.8 249 53.8
Glyma.12G016400 Glycine max HOM05D007201 ORTHO05D009122 1.0e-54 218.4 267 52.8
Lalb_Chr19g0140031 Lupinus albus HOM05D007201 ORTHO05D009122 3.9e-54 216.5 266 48.1
arahy.Tifrunner.gnm1.ann1.G7GJBK Arachis hypogaea HOM05D007201 ORTHO05D009122 5.1e-54 216.1 286 51.4
THA.LOC104809224 Tarenaya hassleriana HOM05D007201 ORTHO05D009122 5.1e-54 216.1 286 50.3
CANSAT25G2467 Cannabis sativa HOM05D007201 ORTHO05D009122 8.8e-54 215.3 246 47.2
Thhalv10018711m.g Eutrema salsugineum HOM05D007201 ORTHO05D009122 8.8e-54 215.3 259 52.9
Dinv26498 Davidia involucrata HOM05D007201 ORTHO05D009122 2.6e-53 213.8 292 52.7
PGR142G4385 Punica granatum HOM05D007201 ORTHO05D009122 9.7e-53 211.8 276 47.8
AT1G75340 Arabidopsis thaliana HOM05D007201 ORTHO05D009122 1.4e-51 208.0 250 56.0
CSS0027553 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 9.1e-51 205.3 209 54.5
SEGI_05170 Sequoiadendron giganteum HOM05D007201 ORTHO05D009122 3.4e-50 203.4 312 42.0
Nitab4.5_0000073g0490 Nicotiana tabacum HOM05D007201 ORTHO05D009122 4.5e-50 203.0 330 42.4
FAN12G1512 Fragaria x ananassa HOM05D007201 ORTHO05D009122 1.0e-49 201.8 214 51.4
Aa31LG4G5550 Aethionema arabicum HOM05D007201 ORTHO05D009122 2.2e-49 200.7 280 50.0
A07p40900 Brassica napus HOM05D007201 ORTHO05D009122 7.2e-48 195.7 240 50.4
BraA07t31630Z Brassica rapa HOM05D007201 ORTHO05D009122 7.2e-48 195.7 240 50.4
EL10Ac2g03602 Beta vulgaris HOM05D007201 ORTHO05D009122 9.4e-48 195.3 270 48.1
Medtr4g078160 Medicago truncatula HOM05D007201 ORTHO05D009122 9.4e-48 195.3 323 43.0
C06p49330 Brassica napus HOM05D007201 ORTHO05D009122 4.7e-47 193.0 249 49.0
CDE04G0352 Ceratophyllum demersum HOM05D007201 ORTHO05D009122 2.6e-45 187.2 233 48.5
CSS0037159 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 4.4e-45 186.4 204 51.5
unitig_8.g3542 Utricularia gibba HOM05D007201 ORTHO05D009122 1.3e-44 184.9 298 40.6
BcaC08g47362 Brassica carinata HOM05D007201 ORTHO05D009122 8.2e-44 182.2 228 50.0
BolC6t39968H Brassica oleracea HOM05D007201 ORTHO05D009122 8.2e-44 182.2 228 50.0
Duzib168G1263 Durio zibethinus HOM05D007201 ORTHO05D009122 1.8e-43 181.0 279 47.0
AUR62027959 Chenopodium quinoa HOM05D007201 ORTHO05D009122 3.5e-42 176.8 237 48.9
Zm00001eb227240 Zea mays HOM05D007201 ORTHO05D009122 1.3e-41 174.9 302 41.1
Nitab4.5_0004827g0030 Nicotiana tabacum HOM05D007201 ORTHO05D009122 1.5e-40 171.4 208 47.6
Os06g0704300 Oryza sativa ssp. japonica HOM05D007201 ORTHO05D009122 2.5e-40 170.6 263 44.9
FAN22G0406 Fragaria x ananassa HOM05D007201 ORTHO05D009122 7.0e-35 152.5 300 37.0
Oeu000954.1 Olea europaea HOM05D007201 ORTHO05D009122 5.5e-32 142.9 165 47.9
FAN17G0247 Fragaria x ananassa HOM05D007201 ORTHO05D009122 5.7e-29 132.9 83 68.7
Migut.L01609 Erythranthe guttata HOM05D007201 ORTHO05D009122 1.3e-28 131.7 277 45.1
Mapoly0005s0044 Marchantia polymorpha HOM05D007201 ORTHO05D009122 5.4e-27 126.3 293 35.8
Pp3c7_12210 Physcomitrium patens HOM05D007201 ORTHO05D009122 6.5e-25 119.4 317 32.8
AagrBONN_evm.TU.Sc2ySwM_117.2509 Anthoceros agrestis HOM05D007201 ORTHO05D009122 7.5e-21 105.9 162 38.9
CBR_g15955 Chara braunii HOM05D007201 ORTHO05D009122 6.1e-15 86.3 254 34.6
Gohir.A05G407400 Gossypium hirsutum HOM05D007201 ORTHO05D009122 4.0e-14 83.6 106 50.0
CSS0038290 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 5.7e-13 79.7 47 70.2
ClCG03G010480 Citrullus lanatus HOM05D007201 ORTHO05D009122 7.5e-13 79.3 108 48.1
CSS0018491 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.7e-12 78.2 48 70.8
CSS0006520 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 6.4e-12 76.3 66 56.1
CSS0048863 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 6.4e-12 76.3 66 56.1
CSS0012149 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 7.8e-10 69.3 44 65.9
CSS0032596 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 7.8e-10 69.3 44 65.9
Sed0005629 Sechium edule HOM05D007201 ORTHO05D009122 2.8e-07 60.8 61 54.1
Cre06.g254700 Chlamydomonas reinhardtii HOM05D007201 ORTHO05D009122 5.2e-06 56.6 71 38.0


User provided reference genes

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