Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 7.5e-122 440.7 242 100.0
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 6.9e-83 311.2 239 76.2
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 3.0e-70 269.2 244 63.9
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 3.3e-61 239.2 257 59.1
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 1.6e-60 236.9 254 56.3
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 2.8e-60 236.1 256 58.2
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 1.8e-59 233.4 258 59.3
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 3.1e-59 232.6 249 59.8
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 9.0e-59 231.1 250 59.2
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 1.5e-58 230.3 250 59.2
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 4.5e-58 228.8 258 53.9
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 3.8e-57 225.7 255 59.2
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 6.5e-57 224.9 256 55.9
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 8.4e-57 224.6 246 54.9
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 1.4e-56 223.8 295 48.5
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 2.5e-56 223.0 252 58.3
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 3.2e-56 222.6 250 58.4
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 4.2e-56 222.2 251 53.8
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 4.2e-56 222.2 254 57.5
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 9.3e-56 221.1 291 48.1
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 1.6e-55 220.3 251 53.4
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 2.1e-55 219.9 250 58.0
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 2.7e-55 219.5 262 56.1
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 4.6e-55 218.8 246 57.3
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 6.1e-55 218.4 261 57.1
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 7.9e-55 218.0 252 57.5
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 1.0e-54 217.6 251 57.4
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 1.0e-54 217.6 263 55.5
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 2.3e-54 216.5 258 55.8
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 2.3e-54 216.5 263 55.1
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 3.9e-54 215.7 248 55.6
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 1.1e-53 214.2 247 57.1
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 1.9e-53 213.4 253 56.9
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.9e-53 213.4 253 54.9
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 1.9e-53 213.4 246 56.5
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 1.9e-53 213.4 246 56.5
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.5e-53 213.0 242 58.7
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 3.3e-53 212.6 254 56.3
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 4.3e-53 212.2 262 54.6
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 4.3e-53 212.2 254 56.7
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 1.3e-52 210.7 245 56.7
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 1.3e-52 210.7 250 57.6
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 1.6e-52 210.3 250 58.0
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 2.8e-52 209.5 249 55.0
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 3.7e-52 209.1 247 56.3
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 3.7e-52 209.1 247 56.7
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 4.8e-52 208.8 253 55.3
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 2.4e-51 206.5 254 52.8
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 2.4e-51 206.5 247 54.7
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.1e-51 206.1 254 52.4
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.1e-51 206.1 254 52.8
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 3.1e-51 206.1 254 52.8
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 5.3e-51 205.3 258 56.2
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 6.9e-51 204.9 254 52.0
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 9.0e-51 204.5 248 56.0
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.2e-50 204.1 263 53.2
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 1.5e-50 203.8 252 56.0
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 4.5e-50 202.2 243 54.7
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 4.5e-50 202.2 244 53.7
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 1.0e-49 201.1 263 53.2
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 2.2e-49 199.9 242 53.7
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 5.0e-49 198.7 259 50.6
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 5.0e-49 198.7 247 54.7
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 6.5e-49 198.4 251 53.4
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 8.5e-49 198.0 244 53.7
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 8.5e-49 198.0 247 54.7
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 1.1e-48 197.6 241 53.9
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.1e-48 197.6 285 51.2
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 2.5e-48 196.4 247 54.3
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 4.2e-48 195.7 245 54.3
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 4.2e-48 195.7 251 54.6
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 7.2e-48 194.9 243 53.9
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 1.6e-47 193.7 242 51.7
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 1.6e-47 193.7 244 53.3
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 1.6e-47 193.7 248 54.0
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 1.4e-46 190.7 246 52.8
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 2.3e-46 189.9 251 54.2
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 2.0e-45 186.8 244 53.7
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 5.7e-45 185.3 249 51.4
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 5.7e-45 185.3 248 52.8
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 5.7e-45 185.3 250 52.4
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 9.7e-45 184.5 246 52.4
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 9.7e-45 184.5 254 52.4
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 1.7e-44 183.7 295 47.1
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 5.3e-43 178.7 245 52.7
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 3.4e-42 176.0 273 45.8
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 1.3e-41 174.1 260 49.2
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 8.5e-41 171.4 261 48.3
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 1.2e-39 167.5 261 47.9
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 3.0e-38 162.9 255 49.8
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 9.1e-35 151.4 238 44.5
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 2.5e-32 143.3 248 45.2
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 7.2e-32 141.7 298 39.3
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 1.1e-29 134.4 199 51.3
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 1.5e-29 134.0 292 38.4
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 7.5e-29 131.7 212 50.5
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 8.2e-28 128.3 289 38.4
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 9.1e-27 124.8 223 42.6
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 4.5e-26 122.5 82 70.7
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 6.5e-25 118.6 82 70.7
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 3.2e-24 116.3 273 38.5
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.0e-22 111.3 187 50.3
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 2.3e-22 110.2 69 75.4
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 1.2e-21 107.8 334 33.5
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.4e-21 106.3 154 50.6
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 7.5e-21 105.1 215 46.0
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 8.3e-20 101.7 181 43.1
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.8e-19 100.5 181 42.0
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 1.2e-18 97.8 69 65.2
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 4.5e-18 95.9 145 52.4
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 2.2e-17 93.6 148 52.0
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.1e-11 72.8 175 37.1
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.5e-10 69.7 142 38.0
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.5e-10 69.7 142 38.0
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.5e-10 69.3 179 34.6
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 8.6e-09 65.1 238 31.5
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 5.6e-08 62.4 70 54.3


User provided reference genes

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