Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025208 Vanilla planifolia HOM05D003289 ORTHO05D028359 1.1e-234 816.2 395 100.0
HPP92_025278 Vanilla planifolia HOM05D003289 ORTHO05D004594 1.4e-114 417.2 608 45.2
QL02p000117 Quercus lobata HOM05D003289 ORTHO05D004594 6.6e-59 232.3 572 32.0
QL01p013239 Quercus lobata HOM05D003289 ORTHO05D004594 1.2e-57 228.0 307 43.3
Os02g0511901 Oryza sativa ssp. japonica HOM05D003289 ORTHO05D004594 1.6e-57 227.6 305 45.2
Haze_23425 Corylus avellana HOM05D003289 ORTHO05D004594 1.1e-56 224.9 307 42.7
Zm00001eb241860 Zea mays HOM05D003289 ORTHO05D004594 1.1e-56 224.9 305 44.3
CSS0049320 Camellia sinensis var. sinensis HOM05D003289 ORTHO05D004594 2.4e-56 223.8 623 30.2
PSO384G0460 Papaver somniferum HOM05D003289 ORTHO05D004594 2.4e-56 223.8 303 43.6
PSO425G0048 Papaver somniferum HOM05D003289 ORTHO05D004594 4.0e-56 223.0 303 43.2
Aqoxy2G01337 Aquilegia oxysepala HOM05D003289 ORTHO05D004594 1.2e-55 221.5 620 30.5
CiPaw.13G138900 Carya illinoinensis HOM05D003289 ORTHO05D004594 1.2e-55 221.5 621 29.1
Nn2g14071 Nelumbo nucifera HOM05D003289 ORTHO05D004594 1.5e-55 221.1 302 44.0
CANSAT54G1671 Cannabis sativa HOM05D003289 ORTHO05D004594 3.4e-55 219.9 307 43.0
Ciclev10027662m.g Citrus clementina HOM05D003289 ORTHO05D004594 2.2e-54 217.2 305 43.0
CsaV3_6G014890 Cucumis sativus L. HOM05D003289 ORTHO05D004594 2.9e-54 216.9 308 41.2
Sabra04G0125000 Salix brachista HOM05D003289 ORTHO05D004594 2.9e-54 216.9 307 43.3
Thecc.09G288000 Theobroma cacao HOM05D003289 ORTHO05D004594 2.9e-54 216.9 303 43.9
TAR636G3131 Trochodendron aralioides HOM05D003289 ORTHO05D004594 3.8e-54 216.5 306 42.8
Manes.04G006100 Manihot esculenta HOM05D003289 ORTHO05D004594 8.4e-54 215.3 307 42.3
Atru.chr3.3336 Acer truncatum HOM05D003289 ORTHO05D004594 1.9e-53 214.2 552 29.2
arahy.Tifrunner.gnm1.ann1.U78W58 Arachis hypogaea HOM05D003289 ORTHO05D004594 1.9e-53 214.2 287 42.2
Potri.004G185700 Populus trichocarpa HOM05D003289 ORTHO05D004594 1.9e-53 214.2 306 43.1
Prupe.6G124200 Prunus persica HOM05D003289 ORTHO05D004594 7.1e-53 212.2 304 41.4
Actinidia07230 Actinidia chinensis HOM05D003289 ORTHO05D004594 9.2e-53 211.8 307 41.7
MELO3C021434.2 Cucumis melo HOM05D003289 ORTHO05D004594 9.2e-53 211.8 307 40.7
Lj3g0000987 Lotus japonicus HOM05D003289 ORTHO05D004594 9.2e-53 211.8 307 41.0
MD11G1160700 Malus domestica HOM05D003289 ORTHO05D004594 1.2e-52 211.5 307 41.0
MBI15_g14875_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D004594 2.1e-52 210.7 175 60.6
Eucgr.B03882 Eucalyptus grandis HOM05D003289 ORTHO05D004594 2.7e-52 210.3 303 41.9
vmacro03295 Vaccinium macrocarpon HOM05D003289 ORTHO05D004594 2.7e-52 210.3 307 40.7
arahy.Tifrunner.gnm1.ann1.B2Y78K Arachis hypogaea HOM05D003289 ORTHO05D004594 4.6e-52 209.5 307 39.7
arahy.Tifrunner.gnm1.ann1.F25EMM Arachis hypogaea HOM05D003289 ORTHO05D004594 4.6e-52 209.5 307 39.7
Duzib168G1226 Durio zibethinus HOM05D003289 ORTHO05D004594 4.6e-52 209.5 303 42.2
COL.COLO4_19937 Corchorus olitorius HOM05D003289 ORTHO05D004594 6.0e-52 209.1 327 41.0
Gohir.A05G082500 Gossypium hirsutum HOM05D003289 ORTHO05D004594 6.0e-52 209.1 303 41.9
Rhsim13G0107600 Rhododendron simsii HOM05D003289 ORTHO05D004594 6.0e-52 209.1 307 41.4
Sed0008797 Sechium edule HOM05D003289 ORTHO05D004594 6.0e-52 209.1 307 40.1
Ca_19261_v3 Cicer arietinum L. HOM05D003289 ORTHO05D004594 1.7e-51 207.6 307 39.7
PGR102G2277 Punica granatum HOM05D003289 ORTHO05D004594 1.7e-51 207.6 306 40.5
Migut.N02501 Erythranthe guttata HOM05D003289 ORTHO05D004594 2.3e-51 207.2 307 39.7
ECA233G3796 Erigeron canadensis HOM05D003289 ORTHO05D004594 3.9e-51 206.5 306 41.2
Gohir.D05G085400 Gossypium hirsutum HOM05D003289 ORTHO05D004594 3.9e-51 206.5 303 41.6
Gorai.009G087200 Gossypium raimondii HOM05D003289 ORTHO05D004594 3.9e-51 206.5 303 41.6
Nitab4.5_0004240g0020 Nicotiana tabacum HOM05D003289 ORTHO05D004594 6.6e-51 205.7 303 40.6
VMungo1127G1826 Vigna mungo HOM05D003289 ORTHO05D004594 6.6e-51 205.7 309 40.1
MD03G1139200 Malus domestica HOM05D003289 ORTHO05D004594 1.5e-50 204.5 307 39.7
RcHm_v2.0_Chr5g0054631 Rosa chinensis HOM05D003289 ORTHO05D004594 3.3e-50 203.4 307 40.7
Peaxi162Scf00544g00919 Petunia axillaris HOM05D003289 ORTHO05D004594 4.3e-50 203.0 303 40.9
Cpa.g.sc32.131 Carica papaya HOM05D003289 ORTHO05D004594 5.6e-50 202.6 307 39.1
Lalb_Chr19g0136661 Lupinus albus HOM05D003289 ORTHO05D004594 7.3e-50 202.2 307 39.1
Cc01_g09530 Coffea canephora HOM05D003289 ORTHO05D004594 1.6e-49 201.1 357 37.8
FAN11G3202 Fragaria x ananassa HOM05D003289 ORTHO05D004594 1.6e-49 201.1 308 39.9
Nitab4.5_0003532g0050 Nicotiana tabacum HOM05D003289 ORTHO05D004594 1.6e-49 201.1 303 40.3
Lj2C988G5 Lonicera japonica HOM05D003289 ORTHO05D004594 2.1e-49 200.7 567 28.6
Solyc11g067140.2 Solanum lycopersicum HOM05D003289 ORTHO05D004594 2.1e-49 200.7 303 39.9
FvH4_3g29570 Fragaria vesca HOM05D003289 ORTHO05D004594 2.8e-49 200.3 308 39.6
Sopen11g026820 Solanum pennellii HOM05D003289 ORTHO05D004594 3.6e-49 199.9 303 39.9
MSTRG.17714 Avicennia marina HOM05D003289 ORTHO05D004594 6.2e-49 199.1 307 38.4
Phvul.011G091900 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 8.1e-49 198.7 309 39.2
CAN.G644.7 Capsicum annuum HOM05D003289 ORTHO05D004594 1.1e-48 198.4 333 37.5
FAN16G3075 Fragaria x ananassa HOM05D003289 ORTHO05D004594 1.4e-48 198.0 308 39.0
HanXRQChr05g0145141 Helianthus annuus HOM05D003289 ORTHO05D004594 1.4e-48 198.0 290 41.0
Psat7g153200 Pisum sativum HOM05D003289 ORTHO05D004594 1.4e-48 198.0 304 38.5
Glyma.12G087000 Glycine max HOM05D003289 ORTHO05D004594 9.0e-48 195.3 309 39.8
Medtr4g054980 Medicago truncatula HOM05D003289 ORTHO05D004594 2.0e-47 194.1 306 37.3
DCAR_012181 Daucus carota HOM05D003289 ORTHO05D004594 7.6e-47 192.2 307 38.4
THA.LOC104826411 Tarenaya hassleriana HOM05D003289 ORTHO05D004594 2.9e-46 190.3 312 37.8
ClCG02G022050 Citrullus lanatus HOM05D003289 ORTHO05D004594 4.9e-46 189.5 175 52.6
Sc21g0007220 Simmondsia chinensis HOM05D003289 ORTHO05D004594 6.4e-46 189.1 307 37.5
SEGI_26591 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 1.9e-45 187.6 313 37.4
GSVIVG01031365001 Vitis vinifera HOM05D003289 ORTHO05D004594 3.2e-45 186.8 250 42.4
Lsat_1_v5_gn_6_39840 Lactuca sativa HOM05D003289 ORTHO05D004594 7.1e-45 185.7 297 38.4
SHI18830 Sapria himalayana HOM05D003289 ORTHO05D004594 1.2e-44 184.9 303 36.6
Pp3c13_4500 Physcomitrium patens HOM05D003289 ORTHO05D004594 2.7e-44 183.7 306 37.6
AUR62039240 Chenopodium quinoa HOM05D003289 ORTHO05D004594 6.0e-44 182.6 535 29.3
Lsat_1_v5_gn_6_39380 Lactuca sativa HOM05D003289 ORTHO05D004594 6.0e-44 182.6 304 38.2
CAN.G1177.9 Capsicum annuum HOM05D003289 ORTHO05D004594 7.8e-44 182.2 172 52.9
SGA_v2.0_scaffold102G29919 Striga asiatica HOM05D003289 ORTHO05D004594 1.3e-43 181.4 283 38.5
EL10Ac7g15792 Beta vulgaris HOM05D003289 ORTHO05D004594 2.3e-43 180.6 305 36.4
TPR.G15595 Trifolium pratense HOM05D003289 ORTHO05D004594 2.3e-43 180.6 175 50.9
ClCG09G020580 Citrullus lanatus HOM05D003289 ORTHO05D004594 1.3e-41 174.9 278 36.7
Mapoly0006s0290 Marchantia polymorpha HOM05D003289 ORTHO05D004594 4.8e-41 172.9 303 36.0
unitig_22.g6642 Utricularia gibba HOM05D003289 ORTHO05D004594 2.4e-40 170.6 278 38.1
AUR62009793 Chenopodium quinoa HOM05D003289 ORTHO05D004594 3.1e-40 170.2 302 35.8
BcaB07g34067 Brassica carinata HOM05D003289 ORTHO05D004594 3.4e-39 166.8 357 33.6
C05p06350 Brassica napus HOM05D003289 ORTHO05D004594 1.3e-38 164.9 357 33.1
Aa31LG2G19310 Aethionema arabicum HOM05D003289 ORTHO05D004594 2.2e-38 164.1 305 35.1
BolC5t29391H Brassica oleracea HOM05D003289 ORTHO05D004594 2.9e-38 163.7 357 33.1
A06p05280 Brassica napus HOM05D003289 ORTHO05D004594 3.8e-38 163.3 357 33.1
BraA06t23736Z Brassica rapa HOM05D003289 ORTHO05D004594 3.8e-38 163.3 357 33.1
ATR0820G092 Amborella trichopoda HOM05D003289 ORTHO05D004594 6.4e-38 162.5 204 47.1
RcHm_v2.0_Chr5g0054881 Rosa chinensis HOM05D003289 ORTHO05D028359 8.4e-38 162.2 119 63.9
AL1G18660 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 1.4e-37 161.4 356 32.6
AL4G20810 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 7.1e-37 159.1 305 35.4
CARHR008100 Cardamine hirsuta HOM05D003289 ORTHO05D004594 7.1e-37 159.1 176 47.7
Carub.0001s0761 Capsella rubella HOM05D003289 ORTHO05D004594 9.3e-37 158.7 359 32.6
Sp1g06890 Schrenkiella parvula HOM05D003289 ORTHO05D004594 2.7e-36 157.1 357 33.6
AagrBONN_evm.TU.Sc2ySwM_340.389 Anthoceros agrestis HOM05D003289 ORTHO05D004594 3.5e-36 156.8 306 32.0
AT1G08260 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 1.0e-35 155.2 356 32.6
Thhalv10006524m.g Eutrema salsugineum HOM05D003289 ORTHO05D004594 2.3e-35 154.1 357 32.2
AL4G20650 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 6.7e-35 152.5 174 46.6
SalBow3G0618 Salvia bowleyana HOM05D003289 ORTHO05D004594 1.9e-34 151.0 296 33.8
HanXRQChr09g0249471 Helianthus annuus HOM05D003289 ORTHO05D004594 1.3e-33 148.3 172 47.7
AT2G27120 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 2.1e-33 147.5 174 46.0
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 6.9e-32 142.5 179 41.9
CDE02G3272 Ceratophyllum demersum HOM05D003289 ORTHO05D004594 4.2e-29 133.3 166 44.0
SGA_v2.0_scaffold424G51468 Striga asiatica HOM05D003289 ORTHO05D004594 1.2e-28 131.7 203 38.9
MCO02G508 Micromonas commoda HOM05D003289 ORTHO05D004594 1.4e-21 108.2 140 41.4
Cre03.g179961 Chlamydomonas reinhardtii HOM05D003289 ORTHO05D004594 1.5e-18 98.2 259 29.7
Phvul.006G055950 Phaseolus vulgaris HOM05D003289 ORTHO05D028359 5.0e-14 83.2 73 50.7
Hund20868 Selenicereus undatus HOM05D003289 ORTHO05D004594 3.9e-11 73.6 244 28.3
Glyma.11G237700 Glycine max HOM05D003289 ORTHO05D004594 2.4e-08 64.3 112 33.0
MELO3C033806.2 Cucumis melo HOM05D003289 ORTHO05D004594 1.0e-06 58.9 87 35.6
CBR_g8396 Chara braunii HOM05D003289 ORTHO05D004594 1.7e-06 58.2 27 85.2


User provided reference genes

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