Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_023296 Vanilla planifolia HOM05D007300 ORTHO05D009301 0.0e+00 1374.4 690 100.0
HPP92_023271 Vanilla planifolia HOM05D007300 ORTHO05D009301 0.0e+00 1126.7 690 84.5
MBI10_g02388_MAGBIO Magnolia biondii HOM05D007300 ORTHO05D009301 7.8e-156 555.1 599 50.4
TAR627G1006 Trochodendron aralioides HOM05D007300 ORTHO05D009301 3.3e-154 549.7 690 45.7
Glyma.05G164500 Glycine max HOM05D007300 ORTHO05D009301 1.6e-148 530.8 652 44.6
GSVIVG01021378001 Vitis vinifera HOM05D007300 ORTHO05D009301 2.7e-148 530.0 598 48.3
CiPaw.10G096200 Carya illinoinensis HOM05D007300 ORTHO05D009301 7.8e-148 528.5 599 48.2
QL05p060322 Quercus lobata HOM05D007300 ORTHO05D009301 7.8e-148 528.5 689 45.0
Gorai.011G040700 Gossypium raimondii HOM05D007300 ORTHO05D009301 6.6e-147 525.4 604 45.9
Gohir.D10G038600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 4.3e-146 522.7 604 45.9
Glyma.08G121900 Glycine max HOM05D007300 ORTHO05D009301 9.5e-146 521.5 588 46.4
ClCG03G007190 Citrullus lanatus HOM05D007300 ORTHO05D009301 1.2e-145 521.2 593 46.4
RcHm_v2.0_Chr5g0012901 Rosa chinensis HOM05D007300 ORTHO05D009301 2.3e-144 516.9 595 47.6
Cfa001024 Carpinus fangiana HOM05D007300 ORTHO05D009301 6.8e-144 515.4 599 47.9
Gohir.A10G037600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 6.8e-144 515.4 604 45.2
PSO541G4163 Papaver somniferum HOM05D007300 ORTHO05D009301 8.9e-144 515.0 587 48.6
Thecc.06G157700 Theobroma cacao HOM05D007300 ORTHO05D009301 1.2e-143 514.6 604 46.2
Ciclev10014510m.g Citrus clementina HOM05D007300 ORTHO05D009301 2.0e-143 513.8 597 47.7
Aqoxy1G01857 Aquilegia oxysepala HOM05D007300 ORTHO05D009301 2.6e-143 513.5 681 44.1
FAN21G2574 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.3e-142 511.1 595 46.6
Potri.001G353800 Populus trichocarpa HOM05D007300 ORTHO05D009301 1.3e-142 511.1 605 46.1
Dinv32299 Davidia involucrata HOM05D007300 ORTHO05D009301 2.2e-142 510.4 599 46.7
Lalb_Chr13g0295471 Lupinus albus HOM05D007300 ORTHO05D009301 2.9e-142 510.0 599 45.9
CSS0020184 Camellia sinensis var. sinensis HOM05D007300 ORTHO05D009301 3.7e-142 509.6 601 46.1
AUR62027555 Chenopodium quinoa HOM05D007300 ORTHO05D009301 2.4e-141 506.9 596 44.1
TWI73G0852 Tripterygium wilfordii HOM05D007300 ORTHO05D009301 3.5e-140 503.1 597 45.7
FvH4_3g06410 Fragaria vesca HOM05D007300 ORTHO05D009301 6.0e-140 502.3 672 43.2
Prupe.4G073700 Prunus persica HOM05D007300 ORTHO05D009301 6.0e-140 502.3 618 46.0
CsaV3_1G032780 Cucumis sativus L. HOM05D007300 ORTHO05D009301 7.8e-140 501.9 593 46.4
Phvul.002G244500 Phaseolus vulgaris HOM05D007300 ORTHO05D009301 2.3e-139 500.4 640 43.4
AUR62035801 Chenopodium quinoa HOM05D007300 ORTHO05D009301 2.5e-138 496.9 596 43.6
arahy.Tifrunner.gnm1.ann1.D64P8M Arachis hypogaea HOM05D007300 ORTHO05D009301 9.6e-138 495.0 601 46.1
Actinidia19486 Actinidia chinensis HOM05D007300 ORTHO05D009301 1.2e-137 494.6 601 45.1
Lj4g0024386 Lotus japonicus HOM05D007300 ORTHO05D009301 2.8e-137 493.4 601 43.9
COL.COLO4_22798 Corchorus olitorius HOM05D007300 ORTHO05D009301 3.6e-137 493.0 605 44.8
Cpa.g.sc17.110 Carica papaya HOM05D007300 ORTHO05D009301 4.7e-137 492.7 593 45.7
Manes.17G064900 Manihot esculenta HOM05D007300 ORTHO05D009301 1.1e-136 491.5 598 45.3
MD05G1291800 Malus domestica HOM05D007300 ORTHO05D009301 1.4e-136 491.1 622 44.7
Ca_17871_v3 Cicer arietinum L. HOM05D007300 ORTHO05D009301 1.8e-136 490.7 596 43.8
arahy.Tifrunner.gnm1.ann1.FQ35JE Arachis hypogaea HOM05D007300 ORTHO05D009301 2.4e-136 490.3 612 45.1
Medtr8g088030 Medicago truncatula HOM05D007300 ORTHO05D009301 6.8e-136 488.8 597 43.9
TPR.G6793 Trifolium pratense HOM05D007300 ORTHO05D009301 1.3e-134 484.6 681 40.5
VMungo0251G3397 Vigna mungo HOM05D007300 ORTHO05D009301 2.2e-134 483.8 634 43.4
Sabra16G0232700 Salix brachista HOM05D007300 ORTHO05D009301 4.9e-134 482.6 623 43.7
CANSAT35G1474 Cannabis sativa HOM05D007300 ORTHO05D009301 8.4e-134 481.9 691 42.8
Eucgr.D00343 Eucalyptus grandis HOM05D007300 ORTHO05D009301 1.4e-133 481.1 585 44.3
FAN11G2841 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.4e-133 481.1 733 40.1
Nn3g20905 Nelumbo nucifera HOM05D007300 ORTHO05D009301 5.4e-133 479.2 561 46.9
Nitab4.5_0003714g0040 Nicotiana tabacum HOM05D007300 ORTHO05D009301 9.3e-133 478.4 675 41.3
Peaxi162Scf00649g00027 Petunia axillaris HOM05D007300 ORTHO05D009301 6.0e-132 475.7 629 42.9
Haze_05485 Corylus avellana HOM05D007300 ORTHO05D009301 7.8e-132 475.3 696 41.8
Thhalv10000812m.g Eutrema salsugineum HOM05D007300 ORTHO05D009301 8.7e-131 471.9 597 41.5
Nitab4.5_0001283g0060 Nicotiana tabacum HOM05D007300 ORTHO05D009301 1.5e-130 471.1 678 41.0
Atru.chr10.1407 Acer truncatum HOM05D007300 ORTHO05D009301 5.6e-130 469.2 564 44.9
HanXRQChr04g0119571 Helianthus annuus HOM05D007300 ORTHO05D009301 5.6e-130 469.2 594 43.1
Sc05g0006590 Simmondsia chinensis HOM05D007300 ORTHO05D009301 1.6e-129 467.6 682 40.8
SGA_v2.0_scaffold1G00132 Striga asiatica HOM05D007300 ORTHO05D009301 1.6e-129 467.6 586 44.7
Lsat_1_v5_gn_7_31040 Lactuca sativa HOM05D007300 ORTHO05D009301 2.1e-129 467.2 589 44.3
Lj1C1181T32 Lonicera japonica HOM05D007300 ORTHO05D009301 3.6e-129 466.5 592 43.6
Oeu021524.1 Olea europaea HOM05D007300 ORTHO05D009301 8.1e-129 465.3 602 43.4
ATR1153G036 Amborella trichopoda HOM05D007300 ORTHO05D009301 2.4e-128 463.8 637 40.7
Aa31LG9G6430 Aethionema arabicum HOM05D007300 ORTHO05D009301 4.0e-128 463.0 630 40.6
CAN.G257.51 Capsicum annuum HOM05D007300 ORTHO05D009301 4.0e-128 463.0 692 40.2
PGSC0003DMG400003073 Solanum tuberosum HOM05D007300 ORTHO05D009301 6.9e-128 462.2 583 44.1
Atru.chr10.1398 Acer truncatum HOM05D007300 ORTHO05D009301 9.0e-128 461.8 564 44.5
A06p45940 Brassica napus HOM05D007300 ORTHO05D009301 2.0e-127 460.7 688 39.7
DCAR_027959 Daucus carota HOM05D007300 ORTHO05D009301 3.4e-127 459.9 603 43.8
Carub.0008s0147 Capsella rubella HOM05D007300 ORTHO05D009301 7.6e-127 458.8 586 41.0
BolC7t43517H Brassica oleracea HOM05D007300 ORTHO05D009301 2.2e-126 457.2 686 38.8
Sp2g11270 Schrenkiella parvula HOM05D007300 ORTHO05D009301 2.9e-126 456.8 598 41.3
AL8G11990 Arabidopsis lyrata HOM05D007300 ORTHO05D009301 3.8e-126 456.4 586 40.6
ECA236G2360 Erigeron canadensis HOM05D007300 ORTHO05D009301 3.8e-126 456.4 589 42.3
Solyc02g071280.3 Solanum lycopersicum HOM05D007300 ORTHO05D009301 4.9e-126 456.1 592 43.1
C07p29650 Brassica napus HOM05D007300 ORTHO05D009301 6.4e-126 455.7 686 38.6
Psat7g066760 Pisum sativum HOM05D007300 ORTHO05D009301 8.4e-126 455.3 629 40.1
SalBow8G1735 Salvia bowleyana HOM05D007300 ORTHO05D009301 8.4e-126 455.3 587 44.3
THA.LOC104827733 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 2.4e-125 453.8 604 42.7
AT5G46420 Arabidopsis thaliana HOM05D007300 ORTHO05D009301 3.2e-125 453.4 605 39.7
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 7.1e-125 452.2 670 39.6
Migut.M00959 Erythranthe guttata HOM05D007300 ORTHO05D009301 9.3e-125 451.8 679 40.5
Sopen02g020340 Solanum pennellii HOM05D007300 ORTHO05D009301 2.1e-124 450.7 594 43.4
CARHR175340 Cardamine hirsuta HOM05D007300 ORTHO05D009301 1.5e-122 444.5 597 39.5
Duzib235G1110 Durio zibethinus HOM05D007300 ORTHO05D009301 4.9e-118 429.5 606 40.4
PGR044G1273 Punica granatum HOM05D007300 ORTHO05D009301 6.7e-115 419.1 553 41.8
EL10Ac8g19794 Beta vulgaris HOM05D007300 ORTHO05D009301 4.6e-108 396.4 600 38.5
SEGI_38698 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 1.1e-98 365.2 533 38.8
unitig_92.g28150 Utricularia gibba HOM05D007300 ORTHO05D009301 4.8e-97 359.8 537 39.3
FAN16G1565 Fragaria x ananassa HOM05D007300 ORTHO05D009301 3.1e-96 357.1 479 43.4
PSO675G3105 Papaver somniferum HOM05D007300 ORTHO05D009301 3.6e-92 343.6 348 53.2
Sed0024786 Sechium edule HOM05D007300 ORTHO05D009301 1.0e-91 342.0 342 51.5
Zm00001eb296050 Zea mays HOM05D007300 ORTHO05D009301 3.3e-82 310.5 363 47.4
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 3.0e-75 287.3 535 33.1
Mapoly0019s0078 Marchantia polymorpha HOM05D007300 ORTHO05D009301 5.0e-70 270.0 539 33.4
CDE06G2820 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 6.5e-70 269.6 317 47.9
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 3.0e-67 260.8 534 33.0
Os05g0566300 Oryza sativa ssp. japonica HOM05D007300 ORTHO05D009301 6.8e-59 233.0 210 53.8
MELO3C002704.2 Cucumis melo HOM05D007300 ORTHO05D009301 2.0e-55 221.5 357 37.3
Zm00001eb349440 Zea mays HOM05D007300 ORTHO05D009301 1.6e-44 185.3 180 53.9
Gorai.004G093400 Gossypium raimondii HOM05D007300 ORTHO05D009301 3.6e-36 157.5 122 60.7
Gohir.D08G088700 Gossypium hirsutum HOM05D007300 ORTHO05D009301 1.4e-35 155.6 122 60.7
SEGI_17563 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 1.9e-32 145.2 125 50.4
MCO05G669 Micromonas commoda HOM05D007300 ORTHO05D009301 8.6e-22 109.8 233 31.8
Zm00001eb184690 Zea mays HOM05D007300 ORTHO05D009301 5.6e-21 107.1 82 56.1
CDE06G1765 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 6.9e-19 100.1 154 40.3
Cre03.g191950 Chlamydomonas reinhardtii HOM05D007300 ORTHO05D009301 8.4e-17 93.2 241 29.9
Pp3c4_17200 Physcomitrium patens HOM05D003927 ORTHO05D004905 1.0e-14 86.3 302 23.2
AagrBONN_evm.TU.Sc2ySwM_362.1916 Anthoceros agrestis HOM05D003927 ORTHO05D004905 1.5e-10 72.4 195 25.6
Mapoly0089s0037 Marchantia polymorpha HOM05D003927 ORTHO05D004905 8.4e-09 66.6 195 24.1
Zm00001eb070940 Zea mays HOM05D003927 ORTHO05D004905 1.3e-06 59.3 204 24.0
CAN.G149.2 Capsicum annuum HOM05D003927 ORTHO05D004905 1.8e-06 58.9 120 25.0
Zm00001eb430780 Zea mays HOM05D003927 ORTHO05D004905 2.3e-06 58.5 195 24.6
BcaB07g32771 Brassica carinata HOM05D003927 ORTHO05D004905 6.7e-06 57.0 120 25.8
BcaC05g27140 Brassica carinata HOM05D003927 ORTHO05D004905 6.7e-06 57.0 120 25.8
A09p35130 Brassica napus HOM05D003927 ORTHO05D004905 6.7e-06 57.0 120 25.8
C05p30260 Brassica napus HOM05D003927 ORTHO05D004905 6.7e-06 57.0 120 25.8
BolC5t31766H Brassica oleracea HOM05D003927 ORTHO05D004905 6.7e-06 57.0 120 25.8
BraA09t39043Z Brassica rapa HOM05D003927 ORTHO05D004905 6.7e-06 57.0 120 25.8
Carub.0004s1671 Capsella rubella HOM05D003927 ORTHO05D004905 6.7e-06 57.0 120 25.8
AT2G35020 Arabidopsis thaliana HOM05D003927 ORTHO05D004905 8.7e-06 56.6 120 25.8
BcaB04g18183 Brassica carinata HOM05D003927 ORTHO05D004905 8.7e-06 56.6 120 25.8
CANSAT64G2986 Cannabis sativa HOM05D003927 ORTHO05D004905 8.7e-06 56.6 120 25.0


User provided reference genes

Program Settings