Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_012298 Vanilla planifolia HOM05D003939 ORTHO05D005979 0.0e+00 1466.4 748 100.0
HPP92_012253 Vanilla planifolia HOM05D003939 ORTHO05D005979 0.0e+00 1347.4 738 94.6
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 1.1e-203 714.1 735 53.2
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 7.8e-194 681.4 731 50.6
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 2.3e-193 679.9 738 50.1
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.1e-192 677.6 739 49.7
TAR371G1006 Trochodendron aralioides HOM05D003939 ORTHO05D005979 1.2e-191 674.1 737 50.9
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 4.4e-189 665.6 714 50.7
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 1.7e-188 663.7 731 49.5
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 2.4e-187 659.8 761 48.4
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 2.3e-185 653.3 733 49.8
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 4.3e-184 649.0 728 49.7
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 9.6e-184 647.9 716 49.6
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 2.1e-183 646.7 728 49.9
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 6.2e-183 645.2 729 48.8
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 1.4e-182 644.0 729 48.0
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 2.4e-182 643.3 731 48.7
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 5.8e-181 638.6 723 48.8
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 9.9e-181 637.9 728 49.2
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 1.7e-180 637.1 729 48.7
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 2.9e-180 636.3 731 49.7
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 1.9e-179 633.6 538 61.2
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 9.3e-179 631.3 729 47.7
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 3.5e-178 629.4 721 49.0
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 6.6e-177 625.2 705 48.5
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 4.3e-176 622.5 733 48.2
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 3.6e-175 619.4 755 47.5
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 8.1e-175 618.2 729 47.9
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 1.8e-174 617.1 725 47.3
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 4.0e-174 615.9 732 47.5
Glyma.19G029100 Glycine max HOM05D003939 ORTHO05D005979 4.0e-174 615.9 726 48.5
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 2.0e-173 613.6 708 49.2
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.0e-173 613.6 708 49.2
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 2.6e-173 613.2 724 47.0
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 3.4e-173 612.8 721 48.5
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.2e-172 610.1 721 48.3
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 3.8e-172 609.4 726 47.5
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 3.8e-172 609.4 735 47.2
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 6.4e-172 608.6 722 47.8
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 1.1e-171 607.8 728 49.5
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 3.2e-171 606.3 719 47.0
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 1.6e-170 604.0 723 46.9
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.1e-170 603.6 724 48.2
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 3.5e-170 602.8 728 47.4
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 3.5e-170 602.8 727 46.8
CiPaw.03G089600 Carya illinoinensis HOM05D003939 ORTHO05D005979 6.0e-170 602.1 641 52.4
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 2.5e-168 596.7 743 47.0
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 1.6e-167 594.0 730 46.6
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 2.1e-167 593.6 743 47.0
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 1.8e-166 590.5 782 44.4
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 3.1e-166 589.7 636 50.2
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 5.3e-166 589.0 731 45.8
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 1.4e-163 580.9 738 43.8
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 1.2e-162 577.8 742 44.6
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 4.6e-162 575.9 720 46.4
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 6.0e-162 575.5 742 44.7
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 4.3e-160 569.3 725 44.6
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 4.8e-159 565.8 626 48.9
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 4.8e-159 565.8 735 43.9
PSO063G3321 Papaver somniferum HOM05D003939 ORTHO05D005979 4.0e-158 562.8 722 45.6
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 4.0e-158 562.8 751 44.3
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 5.3e-158 562.4 727 45.7
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 9.0e-158 561.6 752 45.1
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 9.0e-158 561.6 735 44.4
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 1.7e-156 557.4 747 43.6
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 2.9e-156 556.6 733 43.0
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 4.9e-156 555.8 750 44.8
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 3.2e-155 553.1 579 51.5
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 9.3e-155 551.6 581 50.3
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 1.6e-154 550.8 746 44.2
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 7.9e-154 548.5 750 44.3
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 2.3e-153 547.0 734 43.3
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 1.1e-152 544.7 756 43.9
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 4.3e-152 542.7 755 43.7
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 4.3e-152 542.7 725 44.1
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 4.3e-152 542.7 745 42.6
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 6.3e-151 538.9 758 43.4
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 8.2e-151 538.5 791 40.5
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 1.1e-150 538.1 753 43.6
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 1.1e-150 538.1 753 43.6
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 1.8e-150 537.3 755 43.0
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 2.4e-150 537.0 742 44.6
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 5.3e-150 535.8 753 43.6
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 5.3e-150 535.8 753 43.6
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 2.9e-148 530.0 663 45.1
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 5.0e-148 529.3 711 43.0
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 7.9e-146 521.9 646 48.1
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 1.6e-143 514.2 741 42.1
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 4.1e-134 483.0 758 41.2
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 3.8e-132 476.5 667 42.0
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 1.9e-131 474.2 648 42.4
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 3.0e-129 466.8 470 51.9
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 2.0e-128 464.2 461 53.6
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 5.7e-128 462.6 651 41.8
SEGI_00927 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 2.6e-125 453.8 675 40.1
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 1.6e-117 427.9 424 53.8
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 2.9e-116 423.7 510 46.9
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 3.2e-115 420.2 755 37.1
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 1.0e-113 415.2 390 55.4
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 6.8e-113 412.5 707 37.5
Oeu007060.1 Olea europaea HOM05D003939 ORTHO05D005979 8.8e-113 412.1 731 38.0
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 8.3e-111 405.6 579 41.1
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 3.0e-105 387.1 747 34.8
Cpa.g.sc2744.1 Carica papaya HOM05D003939 ORTHO05D005979 2.2e-103 380.9 405 51.1
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 1.1e-94 352.1 667 35.2
Gohir.1Z049344 Gossypium hirsutum HOM05D003939 ORTHO05D005979 1.6e-85 321.6 417 45.6
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 6.2e-74 283.1 277 53.4
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 1.5e-67 261.9 452 35.0
Prupe.2G279500 Prunus persica HOM05D003939 ORTHO05D005979 2.5e-67 261.2 431 39.9
ClCG07G007370 Citrullus lanatus HOM05D003939 ORTHO05D005979 1.5e-40 172.2 265 38.9
Psat5g278520 Pisum sativum HOM05D003939 ORTHO05D030477 5.7e-27 127.1 95 66.3
CARHR197770 Cardamine hirsuta HOM05D003939 ORTHO05D005979 1.1e-25 122.9 127 49.6
Hma1.2p1_0481F.1_g162030 Hydrangea macrophylla HOM05D003939 ORTHO05D005979 1.4e-25 122.5 225 36.0
MBI06_g03947_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D013368 4.1e-25 120.9 127 52.0
Psat3g154360 Pisum sativum HOM05D003939 ORTHO05D030477 1.2e-24 119.4 93 65.6
Psat3g154320 Pisum sativum HOM05D003939 ORTHO05D030477 1.0e-23 116.3 93 64.5
Lju41A4T72 Lonicera japonica HOM05D003939 ORTHO05D005979 2.7e-21 108.2 166 38.0
Cre06.g278269 Chlamydomonas reinhardtii HOM05D003939 ORTHO05D005979 1.0e-20 106.3 401 25.9
CAN.G61.23 Capsicum annuum HOM05D003939 ORTHO05D005979 3.9e-20 104.4 116 44.0
MBI19_g03794_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D013368 1.3e-15 89.4 198 32.3
SEGI_31617 Sequoiadendron giganteum HOM05D003939 ORTHO05D050928 6.7e-12 77.0 257 25.3
Solyc03g059400.1 Solanum lycopersicum HOM05D003939 ORTHO05D013368 9.7e-11 73.2 70 57.1
Atru.chr8.420 Acer truncatum HOM05D003939 ORTHO05D013368 2.2e-10 72.0 70 55.7
SEGI_38119 Sequoiadendron giganteum HOM05D003939 ORTHO05D050928 3.7e-10 71.2 151 26.5
Nitab4.5_0001637g0020 Nicotiana tabacum HOM05D003939 ORTHO05D013368 6.3e-10 70.5 89 49.4
Nitab4.5_0002960g0020 Nicotiana tabacum HOM05D003939 ORTHO05D013368 1.1e-09 69.7 73 53.4
ATR0035G002 Amborella trichopoda HOM05D003939 ORTHO05D013368 7.0e-09 67.0 79 48.1
ATR1045G001 Amborella trichopoda HOM05D003939 ORTHO05D013368 7.0e-09 67.0 79 48.1
Hma1.2p1_0481F.1_g162040 Hydrangea macrophylla HOM05D003939 ORTHO05D013368 7.0e-09 67.0 80 52.5
C09p61560 Brassica napus HOM05D003939 ORTHO05D013368 1.2e-08 66.2 102 38.2
ATR0064G012 Amborella trichopoda HOM05D003939 ORTHO05D013368 2.6e-08 65.1 79 46.8
PSO063G0192 Papaver somniferum HOM05D001862 ORTHO05D005979 1.3e-07 62.8 135 32.6
PSO013G0049 Papaver somniferum HOM05D003939 ORTHO05D013368 2.2e-07 62.0 86 39.5


User provided reference genes

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