Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001016 Vanilla planifolia HOM05D005545 ORTHO05D006917 0.0e+00 1478.8 715 100.0
TAR636G1823 Trochodendron aralioides HOM05D005545 ORTHO05D006917 1.2e-188 664.1 733 50.3
Nn7g36650 Nelumbo nucifera HOM05D005545 ORTHO05D006917 1.5e-186 657.1 736 48.4
Nn2g14866 Nelumbo nucifera HOM05D005545 ORTHO05D006917 2.3e-182 643.3 740 47.2
Dinv32030 Davidia involucrata HOM05D005545 ORTHO05D006917 5.7e-178 628.6 726 47.4
Actinidia10163 Actinidia chinensis HOM05D005545 ORTHO05D006917 7.0e-176 621.7 723 47.0
Manes.04G160000 Manihot esculenta HOM05D005545 ORTHO05D006917 5.4e-168 595.5 717 45.9
CDE12G0276 Ceratophyllum demersum HOM05D005545 ORTHO05D006917 1.2e-167 594.3 737 45.3
Hma1.2p1_2114F.1_g314270 Hydrangea macrophylla HOM05D005545 ORTHO05D006917 1.2e-167 594.3 732 46.0
Aqoxy2G00348 Aquilegia oxysepala HOM05D005545 ORTHO05D006917 7.8e-167 591.7 719 46.5
COL.COLO4_21694 Corchorus olitorius HOM05D005545 ORTHO05D006917 8.6e-166 588.2 711 47.3
Ciclev10004162m.g Citrus clementina HOM05D005545 ORTHO05D006917 4.7e-164 582.4 714 45.9
ATR0745G085 Amborella trichopoda HOM05D005545 ORTHO05D006917 1.2e-162 577.8 728 44.8
Thecc.10G162000 Theobroma cacao HOM05D005545 ORTHO05D006917 2.6e-162 576.6 725 46.3
Os01g0952200 Oryza sativa ssp. japonica HOM05D005545 ORTHO05D006917 1.7e-161 573.9 720 45.4
Sopen11g001260 Solanum pennellii HOM05D005545 ORTHO05D006917 3.2e-160 569.7 725 45.4
Solyc11g005250.3 Solanum lycopersicum HOM05D005545 ORTHO05D006917 5.4e-160 568.9 725 45.4
Hund15735 Selenicereus undatus HOM05D005545 ORTHO05D006917 5.0e-158 562.4 721 44.2
Lalb_Chr04g0264091 Lupinus albus HOM05D005545 ORTHO05D006917 6.6e-158 562.0 733 43.7
ClCG05G026770 Citrullus lanatus HOM05D005545 ORTHO05D006917 1.9e-157 560.5 740 43.5
Atru.chr12.1348 Acer truncatum HOM05D005545 ORTHO05D006917 3.3e-157 559.7 733 45.0
PSO384G2575 Papaver somniferum HOM05D005545 ORTHO05D006917 7.3e-157 558.5 725 42.6
Gohir.D04G014900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 3.6e-156 556.2 725 47.2
Rhsim07G0066900 Rhododendron simsii HOM05D005545 ORTHO05D006917 3.6e-156 556.2 749 43.9
Gorai.012G017400 Gossypium raimondii HOM05D005545 ORTHO05D006917 4.7e-156 555.8 725 47.2
Cfa010879 Carpinus fangiana HOM05D005545 ORTHO05D006917 8.1e-156 555.1 726 44.2
QL04p014793 Quercus lobata HOM05D005545 ORTHO05D006917 4.0e-155 552.7 730 44.0
Duzib114G0439 Durio zibethinus HOM05D005545 ORTHO05D006917 2.0e-154 550.4 718 45.5
Prupe.2G034500 Prunus persica HOM05D005545 ORTHO05D006917 4.4e-154 549.3 744 43.5
QL04p018188 Quercus lobata HOM05D005545 ORTHO05D006917 4.4e-154 549.3 731 43.6
Glyma.11G154800 Glycine max HOM05D005545 ORTHO05D006917 5.8e-154 548.9 731 43.1
Haze_03077 Corylus avellana HOM05D005545 ORTHO05D006917 7.5e-154 548.5 725 44.1
PGR044G1070 Punica granatum HOM05D005545 ORTHO05D006917 7.5e-154 548.5 784 41.7
Sed0011144 Sechium edule HOM05D005545 ORTHO05D006917 3.7e-153 546.2 743 41.9
Phvul.005G027400 Phaseolus vulgaris HOM05D005545 ORTHO05D006917 1.1e-152 544.7 714 42.6
CiPaw.13G013000 Carya illinoinensis HOM05D005545 ORTHO05D006917 1.4e-152 544.3 718 43.0
MELO3C012467.2 Cucumis melo HOM05D005545 ORTHO05D006917 1.4e-152 544.3 739 43.0
SalBow5G5421 Salvia bowleyana HOM05D005545 ORTHO05D006917 2.4e-152 543.5 727 42.8
RcHm_v2.0_Chr1g0323901 Rosa chinensis HOM05D005545 ORTHO05D006917 7.1e-152 542.0 727 43.1
Zm00001eb140820 Zea mays HOM05D005545 ORTHO05D006917 1.6e-151 540.8 741 41.2
Cc00_g05310 Coffea canephora HOM05D005545 ORTHO05D006917 2.7e-151 540.0 724 43.2
CsaV3_5G036710 Cucumis sativus L. HOM05D005545 ORTHO05D006917 3.5e-151 539.7 749 41.7
MD02G1288500 Malus domestica HOM05D005545 ORTHO05D006917 1.0e-150 538.1 736 43.1
Sc10g0004410 Simmondsia chinensis HOM05D005545 ORTHO05D006917 1.3e-150 537.7 709 44.3
TPR.G17827 Trifolium pratense HOM05D005545 ORTHO05D006917 1.7e-150 537.3 727 42.9
FAN03G2070 Fragaria x ananassa HOM05D005545 ORTHO05D006917 3.0e-150 536.6 729 43.2
MSTRG.20517 Avicennia marina HOM05D005545 ORTHO05D006917 3.9e-150 536.2 730 43.3
Ca_19084_v3 Cicer arietinum L. HOM05D005545 ORTHO05D006917 3.9e-150 536.2 715 42.5
TWI63G0062 Tripterygium wilfordii HOM05D005545 ORTHO05D006917 6.6e-150 535.4 729 42.0
CAN.G1074.9 Capsicum annuum HOM05D005545 ORTHO05D006917 8.6e-150 535.0 721 42.4
Glyma.04G138300 Glycine max HOM05D005545 ORTHO05D006917 1.9e-149 533.9 712 43.1
AUR62037185 Chenopodium quinoa HOM05D005545 ORTHO05D006917 5.6e-149 532.3 718 43.3
HanXRQChr11g0341811 Helianthus annuus HOM05D005545 ORTHO05D006917 7.3e-149 531.9 717 42.7
SGA_v2.0_scaffold124G33619 Striga asiatica HOM05D005545 ORTHO05D006917 9.5e-149 531.6 716 41.9
Psat5g217720 Pisum sativum HOM05D005545 ORTHO05D006917 3.6e-148 529.6 716 41.8
FAN06G4324 Fragaria x ananassa HOM05D005545 ORTHO05D006917 1.4e-147 527.7 717 42.4
Peaxi162Scf00025g01520 Petunia axillaris HOM05D005545 ORTHO05D006917 5.2e-147 525.8 639 46.2
Migut.B01225 Erythranthe guttata HOM05D005545 ORTHO05D006917 1.5e-146 524.2 715 42.2
Sabra03G0147100 Salix brachista HOM05D005545 ORTHO05D006917 1.5e-146 524.2 737 42.3
THA.LOC104824192 Tarenaya hassleriana HOM05D005545 ORTHO05D006917 2.0e-146 523.9 751 41.5
SGA_v2.0_scaffold319G48544 Striga asiatica HOM05D005545 ORTHO05D006917 2.6e-146 523.5 713 41.0
MD07G1038300 Malus domestica HOM05D005545 ORTHO05D006917 7.6e-146 521.9 743 42.7
Potri.003G197701 Populus trichocarpa HOM05D005545 ORTHO05D006917 1.3e-145 521.2 740 42.3
EL10Ac2g02815 Beta vulgaris HOM05D005545 ORTHO05D006917 1.7e-145 520.8 727 41.5
Potri.T125006 Populus trichocarpa HOM05D005545 ORTHO05D006917 1.7e-145 520.8 740 42.6
Lsat_1_v5_gn_1_115460 Lactuca sativa HOM05D005545 ORTHO05D006917 3.8e-145 519.6 730 41.1
arahy.Tifrunner.gnm1.ann1.598UNF Arachis hypogaea HOM05D005545 ORTHO05D006917 1.1e-141 508.1 757 39.0
DCAR_003247 Daucus carota HOM05D005545 ORTHO05D006917 1.9e-141 507.3 715 40.8
AT3G54460 Arabidopsis thaliana HOM05D005545 ORTHO05D006917 4.3e-141 506.1 755 40.4
arahy.Tifrunner.gnm1.ann1.HR7PRR Arachis hypogaea HOM05D005545 ORTHO05D006917 5.6e-141 505.8 738 40.2
Ah.12g062880 Amaranthus hybridus HOM05D005545 ORTHO05D006917 2.1e-140 503.8 725 39.9
Lj3g0017403 Lotus japonicus HOM05D005545 ORTHO05D006917 6.2e-140 502.3 723 40.7
A04p05370 Brassica napus HOM05D005545 ORTHO05D006917 1.1e-139 501.5 723 41.9
Thhalv10010067m.g Eutrema salsugineum HOM05D005545 ORTHO05D006917 1.1e-139 501.5 754 39.1
BraA04t16237Z Brassica rapa HOM05D005545 ORTHO05D006917 6.9e-139 498.8 723 41.8
Sp5g07960 Schrenkiella parvula HOM05D005545 ORTHO05D006917 1.3e-137 494.6 757 39.2
CSS0017863 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 3.8e-137 493.0 556 47.8
AL5G35510 Arabidopsis lyrata HOM05D005545 ORTHO05D006917 4.9e-137 492.7 756 39.4
CSS0046105 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 4.9e-137 492.7 530 49.4
CANSAT56G1029 Cannabis sativa HOM05D005545 ORTHO05D006917 8.4e-137 491.9 733 38.6
BolC4t25380H Brassica oleracea HOM05D005545 ORTHO05D006917 1.9e-136 490.7 733 40.8
AUR62026877 Chenopodium quinoa HOM05D005545 ORTHO05D006917 3.2e-136 490.0 606 45.4
vmacro13750 Vaccinium macrocarpon HOM05D005545 ORTHO05D006917 9.3e-136 488.4 779 39.4
BcaC02g09068 Brassica carinata HOM05D005545 ORTHO05D006917 2.1e-135 487.3 733 40.7
C04p38060 Brassica napus HOM05D005545 ORTHO05D006917 2.1e-135 487.3 733 40.7
Carub.0005s2108 Capsella rubella HOM05D005545 ORTHO05D006917 1.5e-133 481.1 752 39.0
Aa31sc35G110 Aethionema arabicum HOM05D005545 ORTHO05D006917 1.1e-131 474.9 769 38.2
Gohir.A05G400900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 3.1e-131 473.4 532 49.8
GSVIVG01013494001 Vitis vinifera HOM05D005545 ORTHO05D006917 1.3e-129 468.0 608 42.9
Lj9A655T39 Lonicera japonica HOM05D005545 ORTHO05D006917 1.9e-128 464.2 528 48.7
Medtr3g017390 Medicago truncatula HOM05D005545 ORTHO05D006917 1.9e-128 464.2 643 41.2
VMungo1080G1426 Vigna mungo HOM05D005545 ORTHO05D006917 3.7e-124 449.9 527 46.7
ECA248G0597 Erigeron canadensis HOM05D005545 ORTHO05D006917 4.6e-119 433.0 529 44.6
Oeu040901.1 Olea europaea HOM05D005545 ORTHO05D006917 6.2e-116 422.5 724 36.6
arahy.Tifrunner.gnm1.ann1.3MZP5F Arachis hypogaea HOM05D005545 ORTHO05D006917 1.4e-115 421.4 636 38.5
FvH4_7g02950 Fragaria vesca HOM05D005545 ORTHO05D006917 6.5e-105 386.0 474 45.8
unitig_749.g13482 Utricularia gibba HOM05D005545 ORTHO05D006917 1.6e-103 381.3 579 39.7
Cpa.g.sc997.1 Carica papaya HOM05D005545 ORTHO05D006917 2.0e-101 374.4 459 47.1
CARHR164360 Cardamine hirsuta HOM05D005545 ORTHO05D006917 1.1e-99 368.6 619 36.0
SMO351G0460 Selaginella moellendorffii HOM05D005545 ORTHO05D006917 3.2e-96 357.1 594 36.9
BcaB02g08489 Brassica carinata HOM05D005545 ORTHO05D006917 1.4e-88 331.6 442 41.9
CBR_g54197 Chara braunii HOM05D005545 ORTHO05D006917 9.1e-75 285.8 650 31.8
Mapoly0059s0106 Marchantia polymorpha HOM05D005545 ORTHO05D006917 9.1e-75 285.8 626 31.9
Eucgr.J01185 Eucalyptus grandis HOM05D005545 ORTHO05D006917 4.4e-69 266.9 397 39.3
Pp3c16_14340 Physcomitrium patens HOM05D005545 ORTHO05D006917 3.0e-49 201.1 447 33.1
Actinidia06243 Actinidia chinensis HOM05D005545 ORTHO05D006917 4.3e-48 197.2 227 45.4
PRCOL_00000400 Prasinoderma coloniale HOM05D005545 ORTHO05D006917 2.4e-35 154.8 376 31.1
Nitab4.5_0003414g0020 Nicotiana tabacum HOM05D005545 ORTHO05D006917 2.7e-34 151.4 251 36.7
Nitab4.5_0000320g0210 Nicotiana tabacum HOM05D005545 ORTHO05D006917 8.6e-33 146.4 243 37.0
Actinidia10168 Actinidia chinensis HOM05D005545 ORTHO05D006917 4.0e-30 137.5 169 43.8
Peaxi162Scf00025g01521 Petunia axillaris HOM05D005545 ORTHO05D006917 6.8e-30 136.7 213 40.8
CSS0040259 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 4.2e-27 127.5 172 41.9
CSS0008348 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 5.4e-27 127.1 172 41.9
Cre05.g230800 Chlamydomonas reinhardtii HOM05D005545 ORTHO05D006917 1.4e-22 112.5 193 33.7
Ah.10g025000 Amaranthus hybridus HOM05D005545 ORTHO05D006917 5.3e-22 110.5 125 38.4
MCO04G441 Micromonas commoda HOM05D005545 ORTHO05D006917 3.8e-20 104.4 207 34.8
SHI03991 Sapria himalayana HOM05D005545 ORTHO05D006917 8.4e-20 103.2 164 37.8
VMungo1080G1303 Vigna mungo HOM05D005545 ORTHO05D006917 1.1e-19 102.8 172 37.2
Lj9C655T12 Lonicera japonica HOM05D005545 ORTHO05D006917 1.4e-19 102.4 184 37.0
CAN.G694.97 Capsicum annuum HOM05D001043 ORTHO05D001555 2.4e-14 85.1 203 31.5
Zm00001eb140840 Zea mays HOM05D005545 ORTHO05D006917 7.1e-11 73.6 175 32.6
Cre07.g340100 Chlamydomonas reinhardtii HOM05D005545 ORTHO05D142524 7.4e-08 63.5 47 46.8
Medtr1g044120 Medicago truncatula HOM05D000515 ORTHO05D003188 3.1e-06 58.2 112 33.0
GSVIVG01027728001 Vitis vinifera HOM05D000515 ORTHO05D003188 3.1e-06 58.2 110 32.7
Lalb_Chr03g0037131 Lupinus albus HOM05D000515 ORTHO05D003188 4.0e-06 57.8 99 34.3
Ca_11962_v3 Cicer arietinum L. HOM05D000515 ORTHO05D003188 5.3e-06 57.4 99 33.3
Cc01_g09920 Coffea canephora HOM05D000515 ORTHO05D003188 9.0e-06 56.6 116 30.2


User provided reference genes

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