Gene: Solyc11g005250.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g005250.3
  • Transcript Identifier Solyc11g005250.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 216753-226087 : negative

Gene Family Information

  • ID HOM05D005545
  • #Genes/#Species 138/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g005250.3.1
  • uniprot A0A3Q7JHD6
  • gene_id Solyc11g005250

Descriptions

  • Description SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein (AHRD V3.3 *** A0A1I9LN96_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G54460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001810 F-box domain
IPR000330 SNF2, N-terminal
IPR036047 F-box-like domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR038718 SNF2-like, N-terminal domain superfamily
IPR011124 Zinc finger, CW-type
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
Mapman id Description
12.4.8.2.1 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SSO1653-like group.chromatin remodeling factor (SHPRH)