Gene: Cc00_g05310
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc00_g05310
- Transcript Identifier Cc00_g05310.1
- Gene Type Coding gene
- Location chr0 : 41230970-41242242 : positive
Gene Family Information
- ID HOM05D005545
- #Genes/#Species 138/97
- Phylogenetic origin
- ID ORTHO05D006917
- #Genes/#Species 136/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB B9GWX1
- UniProtKB B9RGB4
- UniProtKB P36607
- UniProtKB F6I5R7
- UniProtKB Q9M1I1
- UniProtKB Q9FNI6
- id GSCOCG00006103001
Descriptions
- Description F-box protein At3g54460
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G54460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR011124 | Zinc finger, CW-type |
| IPR000330 | SNF2, N-terminal |
| IPR036047 | F-box-like domain superfamily |
| Mapman id | Description |
|---|---|
| 12.4.8.2.1 | Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SSO1653-like group.chromatin remodeling factor (SHPRH) |