Gene: Sp5g07960
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp5g07960
- Transcript Identifier Sp5g07960.1
- Gene Type Coding gene
- Location ch5-1 : 2972616-2978003 : positive
Gene Family Information
- ID HOM05D005545
- #Genes/#Species 138/97
- Phylogenetic origin
- ID ORTHO05D006917
- #Genes/#Species 136/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Sp5g07960.v2.2
- pacid 45075811
Descriptions
- Description PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G54460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR001810 | F-box domain |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR036047 | F-box-like domain superfamily |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR011124 | Zinc finger, CW-type |
| IPR000330 | SNF2, N-terminal |
| Mapman id | Description |
|---|---|
| 12.4.8.2.1 | Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SSO1653-like group.chromatin remodeling factor (SHPRH) |