Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.013G207600 Gossypium raimondii HOM05D005149 ORTHO05D006251 2.1e-55 218.8 111 100.0
Gohir.D13G181800 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.5e-48 196.1 106 93.4
Gohir.D13G182000 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.9e-48 195.7 105 93.3
Gohir.A09G246100 Gossypium hirsutum HOM05D005149 ORTHO05D006251 7.3e-48 193.7 106 92.5
Gohir.A11G310500 Gossypium hirsutum HOM05D005149 ORTHO05D006251 7.3e-48 193.7 106 92.5
Gorai.013G207400 Gossypium raimondii HOM05D005149 ORTHO05D006251 1.6e-47 192.6 106 91.5
Gorai.006G271200 Gossypium raimondii HOM05D005149 ORTHO05D006251 6.2e-47 190.7 106 90.6
Gohir.D09G246700 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.8e-46 189.1 106 90.6
Thecc.10G129400 Theobroma cacao HOM05D005149 ORTHO05D006251 6.9e-46 187.2 106 88.7
CiPaw.13G047200 Carya illinoinensis HOM05D005149 ORTHO05D006251 9.9e-45 183.3 106 85.8
Haze_03404 Corylus avellana HOM05D005149 ORTHO05D006251 1.3e-44 183.0 106 84.9
Manes.07G084100 Manihot esculenta HOM05D005149 ORTHO05D006251 1.3e-44 183.0 106 86.8
Migut.N01878 Erythranthe guttata HOM05D005149 ORTHO05D006251 2.2e-44 182.2 106 84.0
Phvul.011G187600 Phaseolus vulgaris HOM05D005149 ORTHO05D006251 6.4e-44 180.6 106 83.0
QL04p050393 Quercus lobata HOM05D005149 ORTHO05D006251 8.4e-44 180.3 106 83.0
CSS0030945 Camellia sinensis var. sinensis HOM05D005149 ORTHO05D006251 1.1e-43 179.9 106 84.0
Lj3g0016494 Lotus japonicus HOM05D005149 ORTHO05D006251 1.1e-43 179.9 106 82.1
Cfa010450 Carpinus fangiana HOM05D005149 ORTHO05D006251 1.4e-43 179.5 101 87.1
Glyma.08G228000 Glycine max HOM05D005149 ORTHO05D006251 1.4e-43 179.5 106 83.0
Potri.010G246400 Populus trichocarpa HOM05D005149 ORTHO05D006251 2.4e-43 178.7 106 83.0
CANSAT56G0938 Cannabis sativa HOM05D005149 ORTHO05D006251 5.4e-43 177.6 106 80.2
Sc09g0004900 Simmondsia chinensis HOM05D005149 ORTHO05D006251 5.4e-43 177.6 106 85.8
Ciclev10015236m.g Citrus clementina HOM05D005149 ORTHO05D006251 7.1e-43 177.2 106 81.1
Hma1.2p1_0327F.1_g126330 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 7.1e-43 177.2 106 82.1
Hund06827 Selenicereus undatus HOM05D005149 ORTHO05D006251 7.1e-43 177.2 106 84.0
RcHm_v2.0_Chr1g0331361 Rosa chinensis HOM05D005149 ORTHO05D006251 1.2e-42 176.4 106 82.1
Dinv24594 Davidia involucrata HOM05D005149 ORTHO05D006251 1.6e-42 176.0 106 82.1
FAN07G2641 Fragaria x ananassa HOM05D005149 ORTHO05D006251 2.1e-42 175.6 106 81.1
Actinidia17467 Actinidia chinensis HOM05D005149 ORTHO05D006251 2.7e-42 175.3 106 80.2
TWI38G0882 Tripterygium wilfordii HOM05D005149 ORTHO05D006251 2.7e-42 175.3 106 83.0
Ah.04g162660 Amaranthus hybridus HOM05D005149 ORTHO05D006251 3.5e-42 174.9 106 80.2
PGR142G4466 Punica granatum HOM05D005149 ORTHO05D006251 3.5e-42 174.9 106 84.0
TPR.G35740 Trifolium pratense HOM05D005149 ORTHO05D006251 3.5e-42 174.9 106 82.1
MSTRG.5085 Avicennia marina HOM05D005149 ORTHO05D006251 4.6e-42 174.5 106 79.2
FAN17G1198 Fragaria x ananassa HOM05D005149 ORTHO05D006251 7.8e-42 173.7 106 80.2
HanXRQChr06g0174201 Helianthus annuus HOM05D005149 ORTHO05D006251 7.8e-42 173.7 106 79.2
ECA246G4563 Erigeron canadensis HOM05D005149 ORTHO05D006251 1.0e-41 173.3 106 78.3
FvH4_4g11870 Fragaria vesca HOM05D005149 ORTHO05D006251 1.0e-41 173.3 106 80.2
FAN12G0991 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.0e-41 173.3 106 80.2
FAN12G2325 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.0e-41 173.3 106 80.2
Ca_12171_v3 Cicer arietinum L. HOM05D005149 ORTHO05D006251 2.3e-41 172.2 106 81.1
Medtr8g044150 Medicago truncatula HOM05D005149 ORTHO05D006251 2.3e-41 172.2 106 81.1
Oeu058668.1 Olea europaea HOM05D005149 ORTHO05D006251 2.3e-41 172.2 106 80.2
SalBow4G1949 Salvia bowleyana HOM05D005149 ORTHO05D006251 2.3e-41 172.2 102 83.3
Psat0s3059g0040 Pisum sativum HOM05D005149 ORTHO05D006251 3.0e-41 171.8 106 81.1
TAR633G2177 Trochodendron aralioides HOM05D005149 ORTHO05D006251 3.0e-41 171.8 106 78.3
GSVIVG01027217001 Vitis vinifera HOM05D005149 ORTHO05D006251 3.9e-41 171.4 106 81.1
EL10Ac4g08774 Beta vulgaris HOM05D005149 ORTHO05D006251 5.1e-41 171.0 106 79.2
FvH4_7g05040 Fragaria vesca HOM05D005149 ORTHO05D006251 5.1e-41 171.0 106 78.3
Lalb_Chr19g0132531 Lupinus albus HOM05D005149 ORTHO05D006251 5.1e-41 171.0 106 81.1
CsaV3_6G035780 Cucumis sativus L. HOM05D005149 ORTHO05D006251 8.7e-41 170.2 106 79.2
FAN03G2277 Fragaria x ananassa HOM05D005149 ORTHO05D006251 8.7e-41 170.2 106 79.2
vmacro20844 Vaccinium macrocarpon HOM05D005149 ORTHO05D006251 1.1e-40 169.9 107 81.3
DCAR_023093 Daucus carota HOM05D005149 ORTHO05D006251 1.5e-40 169.5 107 78.5
Nn2g14694 Nelumbo nucifera HOM05D005149 ORTHO05D006251 1.5e-40 169.5 106 80.2
CAN.G134.53 Capsicum annuum HOM05D005149 ORTHO05D006251 2.5e-40 168.7 106 78.3
GSVIVG01010707001 Vitis vinifera HOM05D005149 ORTHO05D006251 2.5e-40 168.7 106 80.2
MBI19_g30303_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 3.3e-40 168.3 106 78.3
MD07G1054600 Malus domestica HOM05D005149 ORTHO05D006251 3.3e-40 168.3 106 79.2
Cc02_g32050 Coffea canephora HOM05D005149 ORTHO05D006251 4.3e-40 167.9 106 77.4
Glyma.15G221000 Glycine max HOM05D005149 ORTHO05D006251 5.6e-40 167.5 99 82.8
Hma1.2p1_0327F.1_g126340 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 5.6e-40 167.5 96 84.4
Lalb_Chr03g0032361 Lupinus albus HOM05D005149 ORTHO05D006251 5.6e-40 167.5 106 80.2
Eucgr.G02641 Eucalyptus grandis HOM05D005149 ORTHO05D006251 7.3e-40 167.2 106 79.2
PGSC0003DMG400027500 Solanum tuberosum HOM05D005149 ORTHO05D006251 7.3e-40 167.2 106 76.4
Solyc01g096910.3 Solanum lycopersicum HOM05D005149 ORTHO05D006251 1.3e-39 166.4 106 77.4
Sopen01g040620 Solanum pennellii HOM05D005149 ORTHO05D006251 1.3e-39 166.4 106 77.4
MELO3C011385.2 Cucumis melo HOM05D005149 ORTHO05D006251 1.6e-39 166.0 106 77.4
arahy.Tifrunner.gnm1.ann1.PFS9H6 Arachis hypogaea HOM05D005149 ORTHO05D006251 2.1e-39 165.6 123 68.3
arahy.Tifrunner.gnm1.ann1.Q8TWNW Arachis hypogaea HOM05D005149 ORTHO05D006251 2.1e-39 165.6 123 68.3
Peaxi162Scf00647g00319 Petunia axillaris HOM05D005149 ORTHO05D006251 2.1e-39 165.6 104 76.9
Sed0022214 Sechium edule HOM05D005149 ORTHO05D006251 2.1e-39 165.6 106 77.4
THA.LOC104816483 Tarenaya hassleriana HOM05D005149 ORTHO05D006251 2.8e-39 165.2 106 79.2
Atru.chr12.1229 Acer truncatum HOM05D005149 ORTHO05D006251 4.8e-39 164.5 106 79.2
AUR62014307 Chenopodium quinoa HOM05D005149 ORTHO05D006251 4.8e-39 164.5 103 77.7
MD02G1263600 Malus domestica HOM05D005149 ORTHO05D006251 6.2e-39 164.1 101 82.2
AUR62034100 Chenopodium quinoa HOM05D005149 ORTHO05D006251 1.1e-38 163.3 106 75.5
AT5G04920 Arabidopsis thaliana HOM05D005149 ORTHO05D006251 1.4e-38 162.9 106 78.3
HPP92_019772 Vanilla planifolia HOM05D005149 ORTHO05D006251 1.4e-38 162.9 106 76.4
AL6G14620 Arabidopsis lyrata HOM05D005149 ORTHO05D006251 1.8e-38 162.5 106 78.3
Carub.0010s0002 Capsella rubella HOM05D005149 ORTHO05D006251 1.8e-38 162.5 106 78.3
Aa31LG11G5780 Aethionema arabicum HOM05D005149 ORTHO05D006251 2.4e-38 162.2 106 77.4
PSO339G6394 Papaver somniferum HOM05D005149 ORTHO05D006251 2.4e-38 162.2 106 78.3
Aqoxy1G01331 Aquilegia oxysepala HOM05D005149 ORTHO05D006251 3.1e-38 161.8 106 78.3
Lj7C543G12 Lonicera japonica HOM05D005149 ORTHO05D006251 4.0e-38 161.4 101 80.2
Carub.0006s0386 Capsella rubella HOM05D005149 ORTHO05D006251 5.3e-38 161.0 106 78.3
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 5.3e-38 161.0 106 73.6
SHI21243 Sapria himalayana HOM05D005149 ORTHO05D006251 6.9e-38 160.6 106 73.6
Sp6g37880 Schrenkiella parvula HOM05D005149 ORTHO05D006251 1.2e-37 159.8 106 76.4
Thhalv10013568m.g Eutrema salsugineum HOM05D005149 ORTHO05D006251 2.0e-37 159.1 106 77.4
Os01g0813500 Oryza sativa ssp. japonica HOM05D005149 ORTHO05D006251 2.6e-37 158.7 106 72.6
CARHR208340 Cardamine hirsuta HOM05D005149 ORTHO05D006251 5.8e-37 157.5 106 75.5
Pp3c23_21630 Physcomitrium patens HOM05D005149 ORTHO05D006251 5.8e-37 157.5 106 73.6
CDE04G0393 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 1.3e-36 156.4 106 70.8
Zm00001eb369140 Zea mays HOM05D005149 ORTHO05D006251 6.4e-36 154.1 106 73.6
BcaC06g32201 Brassica carinata HOM05D005149 ORTHO05D006251 1.9e-35 152.5 106 75.5
A10p31210 Brassica napus HOM05D005149 ORTHO05D006251 1.9e-35 152.5 106 75.5
C09p71830 Brassica napus HOM05D005149 ORTHO05D006251 1.9e-35 152.5 106 75.5
BolC9t59932H Brassica oleracea HOM05D005149 ORTHO05D006251 1.9e-35 152.5 106 75.5
BraA10t45165Z Brassica rapa HOM05D005149 ORTHO05D006251 1.9e-35 152.5 106 75.5
Mapoly0072s0023 Marchantia polymorpha HOM05D005149 ORTHO05D006251 1.9e-35 152.5 106 69.8
Zm00001eb149970 Zea mays HOM05D005149 ORTHO05D006251 1.9e-35 152.5 106 72.6
SGA_v2.0_scaffold196G40993 Striga asiatica HOM05D005149 ORTHO05D006251 7.1e-35 150.6 170 51.8
AagrBONN_evm.TU.Sc2ySwM_369.549 Anthoceros agrestis HOM05D005149 ORTHO05D006251 3.9e-33 144.8 106 67.0
Lsat_1_v5_gn_3_25820 Lactuca sativa HOM05D005149 ORTHO05D006251 9.6e-32 140.2 111 66.7
CBR_g40666 Chara braunii HOM05D005149 ORTHO05D006251 2.8e-31 138.7 106 66.0
unitig_749.g13551 Utricularia gibba HOM05D005149 ORTHO05D006251 4.8e-31 137.9 113 63.7
Cpa.g.c41130 Carica papaya HOM05D005149 ORTHO05D006251 5.3e-30 134.4 69 91.3
FAN01G0635 Fragaria x ananassa HOM05D005149 ORTHO05D006251 6.9e-30 134.0 106 66.0
MD12G1098600 Malus domestica HOM05D005149 ORTHO05D006251 9.9e-29 130.2 86 73.3
SMO011G0007 Selaginella moellendorffii HOM05D005149 ORTHO05D006251 1.7e-28 129.4 106 65.1
Duzib106G0431 Durio zibethinus HOM05D005149 ORTHO05D006251 3.8e-28 128.3 80 85.0
Sed0016259 Sechium edule HOM05D005149 ORTHO05D006251 7.9e-26 120.6 67 86.6
VMungo1127G0494 Vigna mungo HOM05D005149 ORTHO05D006251 6.7e-25 117.5 73 82.2
Sabra08G0007600 Salix brachista HOM05D005149 ORTHO05D006251 1.1e-24 116.7 119 54.6
ClCG08G010780 Citrullus lanatus HOM05D005149 ORTHO05D006251 1.6e-23 112.8 74 77.0
Rhsim01G0121200 Rhododendron simsii HOM05D005149 ORTHO05D006251 1.6e-23 112.8 110 57.3
Cpa.g.sc54.64 Carica papaya HOM05D005149 ORTHO05D006251 1.4e-22 109.8 70 78.6
Nitab4.5_0005056g0010 Nicotiana tabacum HOM05D005149 ORTHO05D006251 1.4e-22 109.8 80 71.2
SEGI_09620 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 2.0e-21 105.9 74 68.9
ATR0068G114 Amborella trichopoda HOM05D005149 ORTHO05D006251 2.6e-21 105.5 73 71.2
CAN.G134.55 Capsicum annuum HOM05D005149 ORTHO05D006251 7.6e-21 104.0 73 72.6
PRCOL_00005700 Prasinoderma coloniale HOM05D005149 ORTHO05D006251 1.1e-19 100.1 107 48.6
Cre03.g159750 Chlamydomonas reinhardtii HOM05D005149 ORTHO05D006251 9.3e-19 97.1 109 49.5
MCO16G624 Micromonas commoda HOM05D005149 ORTHO05D006251 7.9e-18 94.0 110 47.3
Nn2g14693 Nelumbo nucifera HOM05D005149 ORTHO05D006251 9.4e-11 70.5 92 51.1
Prupe.2G061300 Prunus persica HOM05D005149 ORTHO05D006251 3.0e-09 65.5 33 84.8
VMungo1127G1160 Vigna mungo HOM05D005149 ORTHO05D000001 5.1e-09 64.7 33 84.8
AagrBONN_evm.TU.Sc2ySwM_369.516 Anthoceros agrestis HOM05D005149 ORTHO05D006251 3.7e-07 58.5 90 42.2


User provided reference genes

Program Settings