Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 1.9e-245 852.0 437 100.0
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 1.4e-238 829.3 437 97.0
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 1.7e-212 742.7 438 87.4
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 1.3e-204 716.5 439 86.1
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 1.3e-204 716.5 438 84.9
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 3.3e-200 701.8 430 82.8
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 2.2e-196 689.1 444 82.4
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 5.0e-193 677.9 440 82.3
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 3.2e-187 658.7 437 78.7
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 4.0e-182 641.7 437 75.5
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 1.7e-180 636.3 437 76.0
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 2.2e-180 636.0 438 75.6
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 1.9e-179 632.9 436 76.6
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 3.5e-178 628.6 436 75.7
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 3.0e-177 625.5 437 75.3
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 5.1e-177 624.8 437 74.4
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 4.3e-176 621.7 437 74.8
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 2.8e-175 619.0 448 73.2
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 8.1e-175 617.5 437 73.9
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.1e-174 617.1 439 74.0
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 1.7e-172 609.8 436 74.5
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 2.2e-172 609.4 436 72.7
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 2.9e-172 609.0 439 73.6
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 4.9e-172 608.2 436 74.3
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 4.9e-172 608.2 437 72.8
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 8.4e-172 607.4 437 73.5
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 8.4e-172 607.4 436 73.9
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 3.2e-171 605.5 436 73.2
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 1.0e-169 600.5 436 73.6
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 1.0e-169 600.5 439 72.0
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 3.9e-169 598.6 439 72.7
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 1.6e-167 593.2 436 70.6
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 2.4e-166 589.3 461 72.5
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 4.0e-166 588.6 437 71.9
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 9.0e-166 587.4 405 76.3
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 7.6e-165 584.3 437 70.0
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 1.2e-162 577.0 436 70.0
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 1.2e-162 577.0 443 70.4
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 7.8e-162 574.3 438 71.0
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 1.3e-161 573.5 539 61.4
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 1.7e-161 573.2 436 70.6
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 4.3e-160 568.5 447 69.1
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 7.3e-160 567.8 523 60.8
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 3.6e-159 565.5 436 69.0
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 2.0e-157 559.7 520 61.2
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 8.4e-156 554.3 359 82.5
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 1.9e-155 553.1 559 57.6
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 5.1e-153 545.0 358 80.2
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 1.1e-152 543.9 360 78.3
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 4.3e-152 542.0 416 69.0
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 9.6e-152 540.8 439 66.1
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 2.1e-151 539.7 437 67.7
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 6.2e-151 538.1 436 65.1
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 4.0e-150 535.4 438 68.0
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 5.3e-150 535.0 436 68.1
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 2.0e-149 533.1 437 67.0
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 8.4e-148 527.7 408 68.4
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 4.2e-147 525.4 364 77.5
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 9.3e-147 524.2 435 66.0
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 1.6e-146 523.5 408 69.9
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 3.9e-145 518.8 435 65.1
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 4.3e-144 515.4 410 67.1
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 1.3e-143 513.8 438 65.3
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 1.6e-143 513.5 439 64.5
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 4.8e-143 511.9 357 73.4
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.0e-140 504.2 409 67.2
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 4.6e-138 495.4 374 69.0
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 6.1e-138 495.0 429 63.9
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 1.0e-137 494.2 426 63.6
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 1.0e-137 494.2 422 64.5
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 1.8e-137 493.4 357 72.0
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 3.0e-137 492.7 426 63.6
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 5.1e-137 491.9 427 63.7
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 1.5e-136 490.3 429 63.2
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 7.4e-136 488.0 322 78.3
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 2.8e-135 486.1 359 71.0
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.0e-133 479.9 360 71.9
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 3.2e-131 472.6 356 69.1
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 6.1e-130 468.4 360 69.4
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 6.7e-129 464.9 437 61.3
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 4.8e-127 458.8 439 59.7
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 4.8e-127 458.8 441 58.5
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 6.3e-127 458.4 455 59.6
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 3.1e-126 456.1 408 61.8
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 5.9e-125 451.8 400 61.8
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.7e-124 450.3 434 59.2
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 2.9e-124 449.5 423 57.9
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 6.7e-121 438.3 419 55.8
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 1.5e-120 437.2 358 65.9
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 1.5e-120 437.2 435 58.9
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 4.4e-120 435.6 442 59.3
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 5.7e-120 435.3 437 56.1
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 7.0e-118 428.3 357 67.2
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 4.7e-114 415.6 360 63.6
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 2.3e-113 413.3 448 56.0
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 2.3e-113 413.3 358 64.8
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 2.6e-112 409.8 353 66.3
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 2.0e-109 400.2 422 55.9
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.5e-107 394.0 328 63.7
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 6.1e-106 388.7 328 63.4
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 3.1e-102 376.3 329 61.7
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 1.9e-99 367.1 387 53.0
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 4.0e-97 359.4 401 53.4
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 7.5e-96 355.1 395 53.4
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 4.9e-95 352.4 437 49.0
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 8.6e-92 341.7 395 49.4
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 3.2e-86 323.2 365 52.9
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 2.7e-85 320.1 363 50.7
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 2.6e-80 303.5 325 55.7
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 6.4e-79 298.9 221 70.1
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 7.8e-77 292.0 300 58.0
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 6.2e-66 255.8 203 67.5
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 9.9e-64 248.4 231 61.0
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 1.4e-49 201.4 300 40.0
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 2.4e-46 190.7 324 39.5
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 2.4e-41 174.1 320 39.4
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 1.6e-37 161.4 140 58.6
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 1.4e-33 148.3 79 94.9
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 1.3e-31 141.7 79 88.6
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 7.1e-30 136.0 79 86.1
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 9.3e-30 135.6 79 86.1
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 2.1e-29 134.4 79 84.8
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 3.5e-29 133.7 79 84.8
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 3.5e-29 133.7 79 83.5
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 1.3e-28 131.7 79 86.1
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 1.3e-28 131.7 72 90.3
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 3.9e-28 130.2 79 84.8
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 6.7e-28 129.4 79 82.3
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 6.7e-28 129.4 79 82.3
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 1.1e-27 128.6 79 82.3
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 1.4e-25 121.7 79 73.4
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 2.4e-17 94.4 88 59.1
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.6e-13 81.6 52 78.8
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 2.3e-12 77.8 91 51.6
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 4.8e-10 70.1 69 55.1
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 8.2e-10 69.3 44 77.3
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 2.5e-06 57.8 30 86.7
arahy.Tifrunner.gnm1.ann1.T9YY8P Arachis hypogaea HOM05D004161 ORTHO05D005770 7.2e-06 56.2 147 29.9


User provided reference genes

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