Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G033700 Glycine max HOM05D003289 ORTHO05D004594 6.5e-75 283.9 135 100.0
Glyma.11G237700 Glycine max HOM05D003289 ORTHO05D004594 2.3e-72 275.4 134 97.0
Glyma.18G157402 Glycine max HOM05D003289 ORTHO05D004594 1.2e-71 273.1 135 95.6
Glyma.12G087000 Glycine max HOM05D003289 ORTHO05D004594 4.4e-71 271.2 134 94.8
VMungo1127G1826 Vigna mungo HOM05D003289 ORTHO05D004594 4.4e-71 271.2 134 94.8
arahy.Tifrunner.gnm1.ann1.F25EMM Arachis hypogaea HOM05D003289 ORTHO05D004594 1.1e-69 266.5 134 93.3
arahy.Tifrunner.gnm1.ann1.U78W58 Arachis hypogaea HOM05D003289 ORTHO05D004594 1.1e-69 266.5 134 93.3
Phvul.011G091900 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 1.4e-69 266.2 134 93.3
Lalb_Chr19g0136661 Lupinus albus HOM05D003289 ORTHO05D004594 2.7e-68 261.9 134 91.0
Nitab4.5_0003532g0030 Nicotiana tabacum HOM05D003289 ORTHO05D004594 7.7e-68 260.4 134 91.0
Medtr4g054980 Medicago truncatula HOM05D003289 ORTHO05D004594 1.0e-67 260.0 134 91.8
Psat7g189880 Pisum sativum HOM05D003289 ORTHO05D004594 1.0e-67 260.0 134 91.8
TPR.G15595 Trifolium pratense HOM05D003289 ORTHO05D004594 1.0e-67 260.0 134 91.8
Actinidia07230 Actinidia chinensis HOM05D003289 ORTHO05D004594 2.3e-67 258.8 134 91.0
Lj3g0000987 Lotus japonicus HOM05D003289 ORTHO05D004594 2.3e-67 258.8 134 91.0
Nitab4.5_0004240g0030 Nicotiana tabacum HOM05D003289 ORTHO05D004594 2.3e-67 258.8 134 90.3
Peaxi162Scf00544g00920 Petunia axillaris HOM05D003289 ORTHO05D004594 2.3e-67 258.8 134 89.6
CANSAT54G1671 Cannabis sativa HOM05D003289 ORTHO05D004594 2.9e-67 258.5 134 90.3
Eucgr.B03882 Eucalyptus grandis HOM05D003289 ORTHO05D004594 2.9e-67 258.5 134 90.3
MD03G1139200 Malus domestica HOM05D003289 ORTHO05D004594 2.9e-67 258.5 134 90.3
Oeu031488.2 Olea europaea HOM05D003289 ORTHO05D004594 5.0e-67 257.7 134 88.8
QL01p013239 Quercus lobata HOM05D003289 ORTHO05D004594 5.0e-67 257.7 134 90.3
CAN.G644.7 Capsicum annuum HOM05D003289 ORTHO05D004594 6.6e-67 257.3 134 89.6
Nn2g14071 Nelumbo nucifera HOM05D003289 ORTHO05D004594 6.6e-67 257.3 134 89.6
Sopen11g026820 Solanum pennellii HOM05D003289 ORTHO05D004594 6.6e-67 257.3 134 89.6
SEGI_26591 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 8.6e-67 256.9 134 90.3
Cpa.g.sc32.131 Carica papaya HOM05D003289 ORTHO05D004594 1.1e-66 256.5 134 90.3
Thecc.09G288000 Theobroma cacao HOM05D003289 ORTHO05D004594 1.1e-66 256.5 134 89.6
Aqoxy2G01337 Aquilegia oxysepala HOM05D003289 ORTHO05D004594 1.5e-66 256.1 134 90.3
PSO384G0460 Papaver somniferum HOM05D003289 ORTHO05D004594 1.5e-66 256.1 134 89.6
HPP92_025278 Vanilla planifolia HOM05D003289 ORTHO05D004594 1.5e-66 256.1 134 88.8
RcHm_v2.0_Chr5g0054631 Rosa chinensis HOM05D003289 ORTHO05D004594 1.9e-66 255.8 134 89.6
Sabra04G0125000 Salix brachista HOM05D003289 ORTHO05D004594 1.9e-66 255.8 134 88.1
CSS0049320 Camellia sinensis var. sinensis HOM05D003289 ORTHO05D004594 2.5e-66 255.4 134 88.8
COL.COLO4_19937 Corchorus olitorius HOM05D003289 ORTHO05D004594 2.5e-66 255.4 134 88.8
Gohir.A05G082500 Gossypium hirsutum HOM05D003289 ORTHO05D004594 2.5e-66 255.4 134 89.6
PSO425G0048 Papaver somniferum HOM05D003289 ORTHO05D004594 2.5e-66 255.4 134 89.6
DCAR_012181 Daucus carota HOM05D003289 ORTHO05D004594 3.3e-66 255.0 134 88.8
FvH4_3g29570 Fragaria vesca HOM05D003289 ORTHO05D004594 4.3e-66 254.6 134 89.6
FAN16G3075 Fragaria x ananassa HOM05D003289 ORTHO05D004594 4.3e-66 254.6 134 89.6
Lj2C988G5 Lonicera japonica HOM05D003289 ORTHO05D004594 4.3e-66 254.6 134 89.6
Rhsim13G0107600 Rhododendron simsii HOM05D003289 ORTHO05D004594 5.6e-66 254.2 134 88.8
Hund20868 Selenicereus undatus HOM05D003289 ORTHO05D004594 5.6e-66 254.2 134 87.3
Gorai.009G087200 Gossypium raimondii HOM05D003289 ORTHO05D004594 7.3e-66 253.8 134 88.8
MD11G1160700 Malus domestica HOM05D003289 ORTHO05D004594 7.3e-66 253.8 134 90.3
AL4G20810 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 9.5e-66 253.4 134 90.3
AT2G27120 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 9.5e-66 253.4 134 90.3
Ciclev10027662m.g Citrus clementina HOM05D003289 ORTHO05D004594 9.5e-66 253.4 134 88.1
SGA_v2.0_scaffold102G29919 Striga asiatica HOM05D003289 ORTHO05D004594 9.5e-66 253.4 134 88.1
Manes.04G006100 Manihot esculenta HOM05D003289 ORTHO05D004594 1.2e-65 253.1 134 88.1
CiPaw.13G138900 Carya illinoinensis HOM05D003289 ORTHO05D004594 2.1e-65 252.3 134 88.8
ClCG02G022050 Citrullus lanatus HOM05D003289 ORTHO05D004594 2.1e-65 252.3 134 89.6
MELO3C021434.2 Cucumis melo HOM05D003289 ORTHO05D004594 2.1e-65 252.3 134 89.6
CsaV3_6G014890 Cucumis sativus L. HOM05D003289 ORTHO05D004594 2.1e-65 252.3 134 89.6
vmacro03295 Vaccinium macrocarpon HOM05D003289 ORTHO05D004594 2.1e-65 252.3 134 88.1
GSVIVG01031365001 Vitis vinifera HOM05D003289 ORTHO05D004594 2.1e-65 252.3 134 87.3
MBI15_g14875_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D004594 2.8e-65 251.9 134 87.3
PGR102G2277 Punica granatum HOM05D003289 ORTHO05D004594 2.8e-65 251.9 134 88.1
Sed0008797 Sechium edule HOM05D003289 ORTHO05D004594 2.8e-65 251.9 134 88.8
AL4G20650 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 3.6e-65 251.5 134 89.6
AUR62039240 Chenopodium quinoa HOM05D003289 ORTHO05D004594 3.6e-65 251.5 134 85.8
TAR636G3131 Trochodendron aralioides HOM05D003289 ORTHO05D004594 3.6e-65 251.5 134 87.3
SalBow3G0618 Salvia bowleyana HOM05D003289 ORTHO05D004594 4.7e-65 251.1 134 87.3
MSTRG.17714 Avicennia marina HOM05D003289 ORTHO05D004594 6.1e-65 250.8 134 87.3
Migut.N02501 Erythranthe guttata HOM05D003289 ORTHO05D004594 6.1e-65 250.8 134 88.8
Lsat_1_v5_gn_6_39380 Lactuca sativa HOM05D003289 ORTHO05D004594 6.1e-65 250.8 134 88.1
Potri.004G185700 Populus trichocarpa HOM05D003289 ORTHO05D004594 6.1e-65 250.8 134 86.6
ATR0820G092 Amborella trichopoda HOM05D003289 ORTHO05D004594 8.0e-65 250.4 134 86.6
Sc21g0007220 Simmondsia chinensis HOM05D003289 ORTHO05D004594 8.0e-65 250.4 134 89.6
Atru.chr3.3336 Acer truncatum HOM05D003289 ORTHO05D004594 1.4e-64 249.6 134 88.1
ClCG09G020580 Citrullus lanatus HOM05D003289 ORTHO05D004594 1.4e-64 249.6 134 88.1
Ah.08g215940 Amaranthus hybridus HOM05D003289 ORTHO05D004594 1.8e-64 249.2 134 85.1
EL10Ac7g15792 Beta vulgaris HOM05D003289 ORTHO05D004594 1.8e-64 249.2 134 86.6
MELO3C002892.2 Cucumis melo HOM05D003289 ORTHO05D004594 1.8e-64 249.2 134 88.1
Thhalv10006524m.g Eutrema salsugineum HOM05D003289 ORTHO05D004594 2.3e-64 248.8 134 88.1
AUR62009793 Chenopodium quinoa HOM05D003289 ORTHO05D004594 3.0e-64 248.4 134 85.1
Gorai.005G156700 Gossypium raimondii HOM05D003289 ORTHO05D004594 4.0e-64 248.1 134 88.1
Lsat_1_v5_gn_6_39840 Lactuca sativa HOM05D003289 ORTHO05D004594 4.0e-64 248.1 134 87.3
A06p05280 Brassica napus HOM05D003289 ORTHO05D004594 5.2e-64 247.7 134 87.3
C05p06350 Brassica napus HOM05D003289 ORTHO05D004594 5.2e-64 247.7 134 87.3
BolC5t29391H Brassica oleracea HOM05D003289 ORTHO05D004594 5.2e-64 247.7 134 87.3
BraA06t23736Z Brassica rapa HOM05D003289 ORTHO05D004594 5.2e-64 247.7 134 87.3
Cc01_g09530 Coffea canephora HOM05D003289 ORTHO05D004594 5.2e-64 247.7 145 81.4
Sp1g06890 Schrenkiella parvula HOM05D003289 ORTHO05D004594 1.2e-63 246.5 134 87.3
ECA233G3796 Erigeron canadensis HOM05D003289 ORTHO05D004594 1.5e-63 246.1 134 88.1
Carub.0001s0761 Capsella rubella HOM05D003289 ORTHO05D004594 2.0e-63 245.7 134 87.3
Mapoly0006s0290 Marchantia polymorpha HOM05D003289 ORTHO05D004594 2.0e-63 245.7 134 83.6
Zm00001eb241860 Zea mays HOM05D003289 ORTHO05D004594 2.6e-63 245.4 134 87.3
AL1G18660 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 3.4e-63 245.0 134 86.6
AT1G08260 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 3.4e-63 245.0 134 86.6
BcaB07g34067 Brassica carinata HOM05D003289 ORTHO05D004594 3.4e-63 245.0 134 86.6
Pp3c13_4500 Physcomitrium patens HOM05D003289 ORTHO05D004594 9.8e-63 243.4 134 84.3
THA.LOC104826411 Tarenaya hassleriana HOM05D003289 ORTHO05D004594 9.8e-63 243.4 134 85.1
Ca_19261_v3 Cicer arietinum L. HOM05D003289 ORTHO05D004594 1.3e-62 243.0 138 84.8
Duzib168G1226 Durio zibethinus HOM05D003289 ORTHO05D004594 2.9e-62 241.9 160 75.0
Aa31LG2G19310 Aethionema arabicum HOM05D003289 ORTHO05D004594 4.9e-62 241.1 134 85.8
CARHR008100 Cardamine hirsuta HOM05D003289 ORTHO05D004594 8.3e-62 240.4 134 85.1
FAN11G3202 Fragaria x ananassa HOM05D003289 ORTHO05D004594 1.4e-61 239.6 152 78.3
HanXRQChr05g0145141 Helianthus annuus HOM05D003289 ORTHO05D004594 3.2e-61 238.4 134 84.3
HanXRQChr09g0249471 Helianthus annuus HOM05D003289 ORTHO05D004594 9.2e-61 236.9 134 83.6
SHI18830 Sapria himalayana HOM05D003289 ORTHO05D004594 9.2e-61 236.9 135 82.2
Prupe.6G124200 Prunus persica HOM05D003289 ORTHO05D004594 3.5e-60 235.0 182 67.0
AagrBONN_evm.TU.Sc2ySwM_340.389 Anthoceros agrestis HOM05D003289 ORTHO05D004594 3.9e-59 231.5 134 80.6
Hma1.2p1_0305F.1_g119455 Hydrangea macrophylla HOM05D003289 ORTHO05D004594 1.6e-57 226.1 122 86.1
Haze_23425 Corylus avellana HOM05D003289 ORTHO05D004594 4.1e-53 211.5 118 83.1
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 1.0e-51 206.8 123 78.0
MCO02G508 Micromonas commoda HOM05D003289 ORTHO05D004594 8.6e-51 203.8 136 72.1
PRCOL_00004747 Prasinoderma coloniale HOM05D003289 ORTHO05D004594 2.0e-47 192.6 134 70.9
unitig_22.g6642 Utricularia gibba HOM05D003289 ORTHO05D004594 7.5e-47 190.7 134 73.1
Cfa025881 Carpinus fangiana HOM05D003289 ORTHO05D004594 3.0e-43 178.7 134 66.4
arahy.Tifrunner.gnm1.ann1.B2Y78K Arachis hypogaea HOM05D003289 ORTHO05D004594 1.1e-42 176.8 134 68.7
FAN21G1989 Fragaria x ananassa HOM05D003289 ORTHO05D004594 2.5e-42 175.6 85 96.5
CDE02G3768 Ceratophyllum demersum HOM05D003289 ORTHO05D004594 3.3e-42 175.3 85 94.1
COL.COLO4_06999 Corchorus olitorius HOM05D003289 ORTHO05D004594 2.3e-40 169.1 137 66.4
CANSAT25G1376 Cannabis sativa HOM05D003289 ORTHO05D004594 3.1e-40 168.7 88 86.4
PSO782G5595 Papaver somniferum HOM05D003289 ORTHO05D004594 4.6e-36 154.8 96 77.1
CBR_g8395 Chara braunii HOM05D003289 ORTHO05D004594 7.6e-31 137.5 79 79.7
arahy.Tifrunner.gnm1.ann1.183PB6 Arachis hypogaea HOM05D003289 ORTHO05D004594 4.2e-21 105.1 69 73.9
Cre03.g179961 Chlamydomonas reinhardtii HOM05D003289 ORTHO05D004594 9.3e-21 104.0 93 57.0
Gohir.D02G140050 Gossypium hirsutum HOM05D003289 ORTHO05D004594 9.3e-21 104.0 134 45.5
Gohir.D05G085400 Gossypium hirsutum HOM05D003289 ORTHO05D004594 2.7e-20 102.4 134 44.8
CAN.G1177.10 Capsicum annuum HOM05D003289 ORTHO05D004594 1.1e-18 97.1 57 82.5
Phvul.003G000400 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 2.5e-18 95.9 100 54.0


User provided reference genes

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