Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034287001 Vitis vinifera HOM05D000216 ORTHO05D000634 2.3e-91 339.0 165 100.0
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 8.7e-59 230.7 134 83.6
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 2.5e-58 229.2 134 82.8
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 4.3e-58 228.4 134 85.1
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 7.3e-58 227.6 128 87.5
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.4e-56 223.4 131 82.4
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 5.3e-56 221.5 134 80.6
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.9e-56 221.1 131 81.7
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.9e-56 221.1 131 81.7
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.9e-56 221.1 131 81.7
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.9e-56 221.1 131 81.7
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.9e-56 221.1 131 81.7
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 4.5e-55 218.4 162 71.6
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 5.8e-55 218.0 128 84.4
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 5.8e-55 218.0 128 84.4
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.2e-54 216.1 134 79.9
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.4e-53 213.4 137 81.0
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 4.2e-53 211.8 134 73.1
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 4.2e-53 211.8 134 73.1
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 4.2e-53 211.8 134 82.1
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 5.4e-53 211.5 134 79.9
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 9.3e-53 210.7 134 76.9
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 9.3e-53 210.7 134 76.9
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 9.3e-53 210.7 134 78.4
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 9.3e-53 210.7 134 78.4
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 1.2e-52 210.3 134 75.4
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 1.2e-52 210.3 134 76.9
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.2e-52 210.3 134 76.9
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 2.3e-51 206.1 133 75.2
Gorai.008G142400 Gossypium raimondii HOM05D000216 ORTHO05D000634 8.7e-51 204.1 132 78.8
Gohir.D12G131101 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.8e-48 196.4 132 76.5
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.8e-48 196.4 133 72.9
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 4.5e-47 191.8 136 74.3
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 3.2e-45 185.7 136 69.9
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 4.2e-45 185.3 146 68.5
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-44 183.7 134 70.1
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-44 183.7 134 70.1
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-44 183.7 134 70.1
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.2e-44 183.7 134 70.1
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 1.8e-43 179.9 109 78.0
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 3.3e-42 175.6 134 67.2
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 4.3e-42 175.3 124 69.4
Gohir.A09G101340 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.7e-41 172.2 108 79.6
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-40 167.5 128 71.1
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-40 167.5 128 71.1
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-40 167.5 128 71.1
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-40 167.5 128 71.1
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-40 167.5 128 71.1
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-40 167.5 128 71.1
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-40 167.5 128 71.1
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-40 167.5 128 71.1
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-40 167.5 128 71.1
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.0e-40 167.5 128 71.1
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.4e-38 161.0 129 67.4
Potri.019G027580 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.4e-37 160.2 95 82.1
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 7.1e-37 157.9 86 88.4
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.6e-36 156.8 105 75.2
Lj2C1237G1 Lonicera japonica HOM05D000216 ORTHO05D000634 5.1e-35 151.8 96 77.1
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.7e-35 151.0 119 68.9
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.7e-35 151.0 119 68.9
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 5.3e-32 141.7 98 70.4
Phvul.003G256666 Phaseolus vulgaris HOM05D000216 ORTHO05D000634 1.5e-31 140.2 96 74.0
HanXRQChr14g0455011 Helianthus annuus HOM05D000216 ORTHO05D000634 5.0e-30 135.2 109 63.3
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 6.5e-30 134.8 129 58.1
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 6.5e-30 134.8 129 58.1
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.4e-29 133.7 124 58.1
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 3.2e-29 132.5 90 76.7
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 6.1e-28 128.3 92 70.7
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.8e-27 124.4 83 75.9
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-26 122.9 84 73.8
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.3e-25 120.6 86 69.8
Solyc08g028920.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.2e-25 119.8 74 74.3
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-24 114.8 100 65.0
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.1e-21 107.5 124 50.0
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.4e-21 107.1 270 30.7
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-20 102.4 100 59.0
Solyc01g017510.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.1e-20 101.7 98 56.1
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 6.7e-19 98.2 282 28.7
Nitab4.5_0011099g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 8.8e-19 97.8 67 71.6
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 8.8e-19 97.8 282 28.4
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 2.6e-18 96.3 77 62.3
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 4.8e-17 92.0 63 73.0
Hund10655 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-16 90.9 127 47.2
TPR.G1481 Trifolium pratense HOM05D000216 ORTHO05D000634 1.8e-16 90.1 59 72.9
Migut.M00502 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.0e-15 86.7 88 55.7
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 3.4e-15 85.9 50 78.0
BraSC143t45681Z Brassica rapa HOM05D000216 ORTHO05D000634 9.4e-13 77.8 47 76.6
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 9.4e-13 77.8 47 76.6
TPR.G11287 Trifolium pratense HOM05D000216 ORTHO05D000634 1.2e-12 77.4 75 53.3
CsaV3_5G013200 Cucumis sativus L. HOM05D000580 ORTHO05D001488 2.7e-12 76.3 48 77.1
Nn4g23967 Nelumbo nucifera HOM05D000216 ORTHO05D000634 2.7e-12 76.3 39 89.7
Nitab4.5_0003361g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 8.0e-12 74.7 55 67.3
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 1.8e-11 73.6 48 75.0
Migut.J01368 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.8e-11 73.6 50 70.0
EL10Ac6g14564 Beta vulgaris HOM05D000216 ORTHO05D000634 5.2e-11 72.0 71 53.5
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 5.2e-11 72.0 50 72.0
ClCG01G011270 Citrullus lanatus HOM05D000216 ORTHO05D000634 8.8e-11 71.2 57 66.7
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 8.8e-11 71.2 37 89.2
Zm00001eb418100 Zea mays HOM05D000216 ORTHO05D000634 2.0e-10 70.1 54 63.0
Nitab4.5_0000502g0040 Nicotiana tabacum HOM05D000216 ORTHO05D000634 3.3e-10 69.3 45 66.7
arahy.Tifrunner.gnm1.ann1.ZI741N Arachis hypogaea HOM05D000216 ORTHO05D000634 7.4e-10 68.2 134 35.1
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 2.8e-09 66.2 50 64.0
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 8.2e-09 64.7 31 96.8
Solyc06g074600.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.2e-09 64.7 32 90.6
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 6.5e-06 55.1 34 76.5


User provided reference genes

Program Settings