Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 1.5e-123 446.4 258 100.0
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 1.1e-86 323.9 254 78.0
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 4.6e-85 318.5 262 73.7
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 1.7e-84 316.6 254 76.4
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 8.6e-84 314.3 254 74.8
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 1.8e-81 306.6 255 67.1
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 6.8e-81 304.7 254 74.4
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 3.4e-80 302.4 261 69.0
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 1.7e-79 300.1 258 66.3
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 2.9e-79 299.3 258 69.4
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 2.9e-79 299.3 254 71.3
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.8e-79 298.9 258 69.4
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 8.4e-79 297.7 259 69.9
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.4e-78 297.0 254 69.3
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.2e-78 295.8 254 68.9
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 7.1e-78 294.7 259 73.4
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 2.7e-77 292.7 254 70.5
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 4.6e-77 292.0 254 70.9
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 1.0e-76 290.8 254 72.0
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 3.9e-76 288.9 259 68.7
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 1.5e-75 287.0 254 66.5
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 5.6e-75 285.0 259 71.4
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 9.6e-75 284.3 254 69.7
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 1.6e-74 283.5 262 69.8
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 4.8e-74 282.0 259 71.0
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 4.8e-74 282.0 254 71.3
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 4.8e-74 282.0 264 70.5
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 6.2e-74 281.6 255 70.6
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 8.1e-74 281.2 262 69.5
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 1.1e-73 280.8 292 58.2
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 2.4e-73 279.6 254 69.3
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 3.1e-73 279.3 254 66.1
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 5.3e-73 278.5 261 63.6
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 9.0e-73 277.7 261 62.5
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 1.5e-72 276.9 254 67.3
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 1.5e-72 276.9 261 62.8
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 4.4e-72 275.4 288 56.9
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 4.4e-72 275.4 261 62.5
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 9.9e-72 274.2 254 62.6
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 2.9e-71 272.7 256 69.5
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 6.4e-71 271.6 259 71.8
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 8.4e-71 271.2 261 64.4
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 8.4e-71 271.2 254 68.1
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 2.4e-70 269.6 256 69.5
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 3.2e-70 269.2 254 66.5
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 3.2e-70 269.2 254 66.5
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 9.3e-70 267.7 259 65.6
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 1.6e-69 266.9 254 67.7
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 2.1e-69 266.5 261 62.1
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 6.0e-69 265.0 274 64.6
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 1.0e-68 264.2 265 64.9
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 1.0e-68 264.2 256 66.4
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 2.3e-68 263.1 261 63.2
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 3.9e-68 262.3 254 65.4
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 3.9e-68 262.3 262 64.1
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 6.6e-68 261.5 254 64.6
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 1.6e-66 256.9 257 64.6
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 2.1e-66 256.5 262 63.4
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 1.4e-65 253.8 249 64.7
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 4.0e-65 252.3 296 58.4
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 9.0e-65 251.1 254 64.2
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 1.2e-64 250.8 261 57.5
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 1.2e-64 250.8 255 62.7
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 1.3e-63 247.3 261 57.1
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 6.4e-63 245.0 263 63.5
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 4.2e-62 242.3 255 60.0
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 7.1e-62 241.5 255 64.3
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 7.1e-62 241.5 260 61.5
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 9.3e-62 241.1 256 63.7
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 1.6e-61 240.4 256 63.7
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 3.9e-60 235.7 263 62.4
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 3.9e-60 235.7 255 63.1
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 1.5e-59 233.8 254 60.2
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 5.6e-59 231.9 263 61.6
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 7.4e-59 231.5 254 63.4
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 9.6e-59 231.1 256 60.9
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 9.6e-59 231.1 256 60.2
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.6e-58 230.3 295 56.9
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 4.8e-58 228.8 253 56.9
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 1.2e-56 224.2 256 60.5
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 4.9e-55 218.8 254 57.5
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 1.1e-54 217.6 257 58.0
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 1.1e-54 217.6 256 60.9
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 1.2e-53 214.2 255 57.6
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 2.7e-53 213.0 254 57.1
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 7.9e-53 211.5 255 58.8
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 1.0e-52 211.1 256 50.8
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 1.8e-49 200.3 208 67.3
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 2.4e-49 199.9 257 53.3
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 2.4e-49 199.9 256 49.6
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 2.6e-48 196.4 269 55.4
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 1.7e-47 193.7 253 56.1
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 1.1e-46 191.0 247 50.2
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 1.8e-41 173.7 298 47.0
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 1.2e-40 171.0 259 52.1
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.1e-38 164.5 116 75.0
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 1.0e-36 157.9 287 44.6
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.9e-36 156.0 149 67.1
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 3.7e-34 149.4 99 76.8
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 1.1e-33 147.9 211 55.9
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.4e-33 147.5 217 58.1
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 1.0e-31 141.4 292 44.9
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.4e-30 137.5 188 50.0
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 9.4e-30 134.8 188 50.0
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 7.9e-29 131.7 335 37.0
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 2.2e-26 123.6 282 38.7
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 1.4e-25 120.9 153 62.7
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 1.4e-25 120.9 70 82.9
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 7.0e-25 118.6 70 80.0
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 5.0e-23 112.5 207 50.7
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 8.8e-20 101.7 150 54.0
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 8.2e-18 95.1 188 41.5
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.8e-17 94.0 256 34.0
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.1e-17 92.8 184 42.4
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.3e-15 87.8 121 52.1
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.6e-13 79.7 85 58.8
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.6e-13 79.7 85 58.8
Ah.08g219340 Amaranthus hybridus HOM05D006779 ORTHO05D008491 2.7e-08 63.5 95 48.4
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 6.5e-07 58.9 61 60.7


User provided reference genes

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