Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01026354001 Vitis vinifera HOM05D006093 ORTHO05D007652 1.1e-62 243.0 119 100.0
GSVIVG01017379001 Vitis vinifera HOM05D006093 ORTHO05D007652 8.4e-58 226.9 113 99.1
MD17G1215000 Malus domestica HOM05D006093 ORTHO05D007652 7.3e-54 213.8 113 92.0
RcHm_v2.0_Chr2g0134861 Rosa chinensis HOM05D006093 ORTHO05D007652 1.6e-53 212.6 113 89.4
FvH4_6g29401 Fragaria vesca HOM05D006093 ORTHO05D007652 4.8e-53 211.1 113 87.6
FAN14G2225 Fragaria x ananassa HOM05D006093 ORTHO05D007652 4.8e-53 211.1 113 87.6
FAN09G4542 Fragaria x ananassa HOM05D006093 ORTHO05D007652 1.4e-52 209.5 113 86.7
Prupe.3G090700 Prunus persica HOM05D006093 ORTHO05D007652 1.4e-52 209.5 113 88.5
Migut.I00747 Erythranthe guttata HOM05D006093 ORTHO05D007652 1.8e-52 209.1 113 86.7
CiPaw.01G249800 Carya illinoinensis HOM05D006093 ORTHO05D007652 3.1e-52 208.4 113 85.8
Hma1.2p1_0017F.1_g011320 Hydrangea macrophylla HOM05D006093 ORTHO05D007652 3.1e-52 208.4 113 86.7
CSS0022367 Camellia sinensis var. sinensis HOM05D006093 ORTHO05D007652 5.3e-52 207.6 113 86.7
Haze_16582 Corylus avellana HOM05D006093 ORTHO05D007652 5.3e-52 207.6 113 86.7
TAR626G1009 Trochodendron aralioides HOM05D006093 ORTHO05D007652 6.9e-52 207.2 113 86.7
QL05p032033 Quercus lobata HOM05D006093 ORTHO05D007652 9.0e-52 206.8 113 86.7
Rhsim12G0190000 Rhododendron simsii HOM05D006093 ORTHO05D007652 1.2e-51 206.5 113 85.8
TWI12G0620 Tripterygium wilfordii HOM05D006093 ORTHO05D007652 1.2e-51 206.5 113 83.2
Atru.chr1.2881 Acer truncatum HOM05D006093 ORTHO05D007652 2.6e-51 205.3 113 85.0
Cpa.g.sc167.9 Carica papaya HOM05D006093 ORTHO05D007652 2.6e-51 205.3 113 85.8
Ciclev10025737m.g Citrus clementina HOM05D006093 ORTHO05D007652 2.6e-51 205.3 113 84.1
MSTRG.11153 Avicennia marina HOM05D006093 ORTHO05D007652 3.4e-51 204.9 113 86.7
COL.COLO4_11898 Corchorus olitorius HOM05D006093 ORTHO05D007652 4.4e-51 204.5 113 85.8
Phvul.005G179300 Phaseolus vulgaris HOM05D006093 ORTHO05D007652 4.4e-51 204.5 113 86.7
Potri.003G031100 Populus trichocarpa HOM05D006093 ORTHO05D007652 4.4e-51 204.5 113 85.8
DCAR_025523 Daucus carota HOM05D006093 ORTHO05D007652 5.8e-51 204.1 113 84.1
Lsat_1_v5_gn_1_34180 Lactuca sativa HOM05D006093 ORTHO05D007652 5.8e-51 204.1 113 84.1
Manes.04G110800 Manihot esculenta HOM05D006093 ORTHO05D007652 5.8e-51 204.1 113 85.0
Thecc.06G031100 Theobroma cacao HOM05D006093 ORTHO05D007652 5.8e-51 204.1 113 85.0
Cc04_g04560 Coffea canephora HOM05D006093 ORTHO05D007652 7.6e-51 203.8 113 84.1
VMungo1080G1109 Vigna mungo HOM05D006093 ORTHO05D007652 7.6e-51 203.8 113 86.7
Eucgr.L03570 Eucalyptus grandis HOM05D006093 ORTHO05D007652 9.9e-51 203.4 113 84.1
SalBow2G3638 Salvia bowleyana HOM05D006093 ORTHO05D007652 1.7e-50 202.6 113 84.1
Gohir.D10G082500 Gossypium hirsutum HOM05D006093 ORTHO05D007652 2.2e-50 202.2 113 84.1
Gorai.011G089400 Gossypium raimondii HOM05D006093 ORTHO05D007652 2.2e-50 202.2 113 84.1
Eucgr.F03905 Eucalyptus grandis HOM05D006093 ORTHO05D007652 2.9e-50 201.8 113 83.2
Duzib235G0399 Durio zibethinus HOM05D006093 ORTHO05D007652 3.8e-50 201.4 113 85.0
Glyma.13G366800 Glycine max HOM05D006093 ORTHO05D007652 4.9e-50 201.1 113 85.0
Nn8g39568 Nelumbo nucifera HOM05D006093 ORTHO05D007652 6.4e-50 200.7 113 84.1
Sabra03G0017500 Salix brachista HOM05D006093 ORTHO05D007652 6.4e-50 200.7 120 82.5
TPR.G37262 Trifolium pratense HOM05D006093 ORTHO05D007652 8.4e-50 200.3 113 83.2
Thhalv10011553m.g Eutrema salsugineum HOM05D006093 ORTHO05D007652 1.1e-49 199.9 113 81.4
PGSC0003DMG400014146 Solanum tuberosum HOM05D006093 ORTHO05D007652 1.1e-49 199.9 113 82.3
Lj3g0003829 Lotus japonicus HOM05D006093 ORTHO05D007652 1.4e-49 199.5 113 83.2
Carub.0001s4146 Capsella rubella HOM05D006093 ORTHO05D007652 1.9e-49 199.1 113 80.5
AUR62016319 Chenopodium quinoa HOM05D006093 ORTHO05D007652 1.9e-49 199.1 113 84.1
HanXRQChr02g0033451 Helianthus annuus HOM05D006093 ORTHO05D007652 1.9e-49 199.1 113 81.4
Manes.11G058700 Manihot esculenta HOM05D006093 ORTHO05D007652 1.9e-49 199.1 113 82.3
vmacro16879 Vaccinium macrocarpon HOM05D006093 ORTHO05D007652 1.9e-49 199.1 113 85.0
CAN.G407.11 Capsicum annuum HOM05D006093 ORTHO05D007652 2.4e-49 198.7 113 82.3
MELO3C017842.2 Cucumis melo HOM05D006093 ORTHO05D007652 2.4e-49 198.7 113 82.3
Nitab4.5_0010806g0010 Nicotiana tabacum HOM05D006093 ORTHO05D007652 2.4e-49 198.7 113 81.4
PGR102G2220 Punica granatum HOM05D006093 ORTHO05D007652 2.4e-49 198.7 113 85.0
Hund00502 Selenicereus undatus HOM05D006093 ORTHO05D007652 3.2e-49 198.4 113 81.4
Solyc03g117510.4 Solanum lycopersicum HOM05D006093 ORTHO05D007652 3.2e-49 198.4 113 82.3
CARHR042600 Cardamine hirsuta HOM05D006093 ORTHO05D007652 4.2e-49 198.0 113 80.5
PSO170G6797 Papaver somniferum HOM05D006093 ORTHO05D007652 4.2e-49 198.0 115 81.7
CANSAT56G0666 Cannabis sativa HOM05D006093 ORTHO05D007652 5.4e-49 197.6 113 81.4
CsaV3_4G001910 Cucumis sativus L. HOM05D006093 ORTHO05D007652 5.4e-49 197.6 113 83.2
Nitab4.5_0003072g0060 Nicotiana tabacum HOM05D006093 ORTHO05D007652 5.4e-49 197.6 113 82.3
BcaC08g43998 Brassica carinata HOM05D006093 ORTHO05D007652 7.1e-49 197.2 113 79.6
Ca_01048_v3 Cicer arietinum L. HOM05D006093 ORTHO05D007652 7.1e-49 197.2 113 82.3
ClCG07G012240 Citrullus lanatus HOM05D006093 ORTHO05D007652 9.3e-49 196.8 113 82.3
AL1G60740 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 1.2e-48 196.4 113 79.6
AT1G52500 Arabidopsis thaliana HOM05D006093 ORTHO05D007652 1.2e-48 196.4 113 78.8
BolC6t36581H Brassica oleracea HOM05D006093 ORTHO05D007652 1.2e-48 196.4 113 78.8
Sp1g39050 Schrenkiella parvula HOM05D006093 ORTHO05D007652 1.2e-48 196.4 113 79.6
Sopen03g036410 Solanum pennellii HOM05D006093 ORTHO05D007652 1.2e-48 196.4 113 82.3
Lalb_Chr24g0395421 Lupinus albus HOM05D006093 ORTHO05D007652 1.6e-48 196.1 113 82.3
Medtr2g104100 Medicago truncatula HOM05D006093 ORTHO05D007652 1.6e-48 196.1 113 82.3
Aa31LG10G2500 Aethionema arabicum HOM05D006093 ORTHO05D007652 2.1e-48 195.7 113 77.9
BcaB02g10988 Brassica carinata HOM05D006093 ORTHO05D007652 2.1e-48 195.7 113 78.8
AUR62011503 Chenopodium quinoa HOM05D006093 ORTHO05D007652 2.1e-48 195.7 113 81.4
Lj5A75T43 Lonicera japonica HOM05D006093 ORTHO05D007652 2.1e-48 195.7 138 70.3
THA.LOC104818014 Tarenaya hassleriana HOM05D006093 ORTHO05D007652 2.1e-48 195.7 113 77.9
EL10Ac9g21886 Beta vulgaris HOM05D006093 ORTHO05D007652 2.7e-48 195.3 113 83.2
Sed0013008 Sechium edule HOM05D006093 ORTHO05D007652 2.7e-48 195.3 113 81.4
arahy.Tifrunner.gnm1.ann1.5T1ZSX Arachis hypogaea HOM05D006093 ORTHO05D007652 4.6e-48 194.5 113 80.5
arahy.Tifrunner.gnm1.ann1.RDN84X Arachis hypogaea HOM05D006093 ORTHO05D007652 4.6e-48 194.5 113 80.5
A05p18970 Brassica napus HOM05D006093 ORTHO05D007652 7.9e-48 193.7 113 78.8
BraA05t20794Z Brassica rapa HOM05D006093 ORTHO05D007652 7.9e-48 193.7 113 78.8
MBI15_g24195_MAGBIO Magnolia biondii HOM05D006093 ORTHO05D007652 7.9e-48 193.7 115 80.9
unitig_62.g23594 Utricularia gibba HOM05D006093 ORTHO05D007652 7.9e-48 193.7 113 79.6
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 1.3e-47 193.0 113 79.6
SGA_v2.0_scaffold5G02719 Striga asiatica HOM05D006093 ORTHO05D007652 1.3e-47 193.0 124 77.4
ATR0800G026 Amborella trichopoda HOM05D006093 ORTHO05D007652 1.7e-47 192.6 113 79.6
FAN05G1370 Fragaria x ananassa HOM05D006093 ORTHO05D007652 8.7e-47 190.3 106 83.0
Ah.01g020480 Amaranthus hybridus HOM05D006093 ORTHO05D007652 3.3e-46 188.3 130 73.8
Psat5g303120 Pisum sativum HOM05D006093 ORTHO05D007652 4.3e-46 188.0 113 81.4
Peaxi162Scf00553g00627 Petunia axillaris HOM05D006093 ORTHO05D007652 7.3e-46 187.2 113 79.6
HPP92_003851 Vanilla planifolia HOM05D006093 ORTHO05D007652 1.6e-45 186.0 113 72.6
CDE05G1298 Ceratophyllum demersum HOM05D006093 ORTHO05D007652 4.8e-45 184.5 114 76.3
Gohir.A10G068900 Gossypium hirsutum HOM05D006093 ORTHO05D007652 6.9e-44 180.6 113 77.9
ECA247G0880 Erigeron canadensis HOM05D006093 ORTHO05D007652 1.3e-42 176.4 113 74.3
Os08g0304900 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 5.4e-41 171.0 112 70.5
HanXRQChr02g0033461 Helianthus annuus HOM05D006093 ORTHO05D007652 3.5e-40 168.3 114 71.9
HanXRQChr02g0033471 Helianthus annuus HOM05D006093 ORTHO05D007652 3.9e-39 164.9 115 71.3
Os06g0643600 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 2.5e-38 162.2 115 64.3
Zm00001eb275260 Zea mays HOM05D006093 ORTHO05D007652 2.4e-36 155.6 114 61.4
SEGI_24777 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 4.0e-36 154.8 103 70.9
SHI11225 Sapria himalayana HOM05D006093 ORTHO05D007652 5.3e-36 154.5 113 66.4
SMO367G0330 Selaginella moellendorffii HOM05D006093 ORTHO05D007652 2.2e-34 149.1 112 65.2
Pp3c23_21520 Physcomitrium patens HOM05D006093 ORTHO05D007652 2.9e-34 148.7 113 61.1
Actinidia08958 Actinidia chinensis HOM05D006093 ORTHO05D007652 6.5e-34 147.5 77 88.3
Oeu058023.3 Olea europaea HOM05D006093 ORTHO05D005440 1.9e-33 146.0 76 89.5
Pp3c8_24280 Physcomitrium patens HOM05D006093 ORTHO05D007652 7.1e-33 144.1 113 60.2
Dinv01702 Davidia involucrata HOM05D006093 ORTHO05D007652 1.8e-31 139.4 91 70.3
Dinv30625 Davidia involucrata HOM05D006093 ORTHO05D007652 1.1e-30 136.7 74 85.1
Dinv21460 Davidia involucrata HOM05D006093 ORTHO05D007652 1.9e-30 136.0 77 80.5
Mapoly0015s0062 Marchantia polymorpha HOM05D006093 ORTHO05D007652 2.5e-30 135.6 113 54.9
Pp3c24_20180 Physcomitrium patens HOM05D006093 ORTHO05D007652 2.5e-25 119.0 114 50.0
Cre10.g428433 Chlamydomonas reinhardtii HOM05D006093 ORTHO05D007652 3.2e-25 118.6 117 50.4
Psat6g066000 Pisum sativum HOM05D006093 ORTHO05D007652 1.2e-24 116.7 64 84.4
MCO15G481 Micromonas commoda HOM05D006093 ORTHO05D007652 9.0e-20 100.5 117 44.4
Cfa001945 Carpinus fangiana HOM05D006093 ORTHO05D007652 1.4e-17 93.2 51 90.2
Sabra14G0094900 Salix brachista HOM05D006093 ORTHO05D007652 1.4e-15 86.7 54 75.9
CBR_g884 Chara braunii HOM05D006093 ORTHO05D007652 3.4e-11 72.0 56 48.2
Actinidia08791 Actinidia chinensis HOM05D006093 ORTHO05D007652 2.9e-10 68.9 36 86.1
Sc10g0008130 Simmondsia chinensis HOM05D006093 ORTHO05D007652 5.5e-09 64.7 36 83.3
Medtr3g118550 Medicago truncatula HOM05D006093 ORTHO05D007652 9.4e-09 63.9 80 47.5
AL7G45760 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 3.9e-07 58.5 36 72.2


User provided reference genes

Program Settings