Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023377001 Vitis vinifera HOM05D000572 ORTHO05D002399 7.4e-16 85.9 38 100.0
GSVIVG01023383001 Vitis vinifera HOM05D000572 ORTHO05D002399 1.0e-12 75.5 36 88.9
AL8G22690 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
AT5G49160 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
BcaC07g41015 Brassica carinata HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
A09p57170 Brassica napus HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
C08p40170 Brassica napus HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
BolC8t51587H Brassica oleracea HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
BraA09t41110Z Brassica rapa HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
Carub.0008s0898 Capsella rubella HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
DCAR_009626 Daucus carota HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
DCAR_019941 Daucus carota HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
Thhalv10000011m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
Thhalv10003514m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
Glyma.04G187600 Glycine max HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
Glyma.06G178200 Glycine max HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
Lalb_Chr01g0008651 Lupinus albus HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
Phvul.004G133200 Phaseolus vulgaris HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
Sabra04G0084200 Salix brachista HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
Sabra19G0000100 Salix brachista HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
Sp4g01970 Schrenkiella parvula HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
TWI15G0599 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
VMungo0464G1362 Vigna mungo HOM05D000572 ORTHO05D002399 2.2e-12 74.3 36 91.7
GSVIVG01023370001 Vitis vinifera HOM05D000572 ORTHO05D002399 2.9e-12 73.9 37 89.2
Actinidia19530 Actinidia chinensis HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Aqoxy1G02545 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
arahy.Tifrunner.gnm1.ann1.5512QZ Arachis hypogaea HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
arahy.Tifrunner.gnm1.ann1.I0VWWF Arachis hypogaea HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
MSTRG.27892 Avicennia marina HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
CAN.G1330.38 Capsicum annuum HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
CAN.G868.5 Capsicum annuum HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
CARHR070510 Cardamine hirsuta HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
CiPaw.12G053900 Carya illinoinensis HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
CDE12G0633 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Dinv19128 Davidia involucrata HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Duzib147G0313 Durio zibethinus HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Migut.N00875 Erythranthe guttata HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Eucgr.I00036 Eucalyptus grandis HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Lj2g0020412 Lotus japonicus HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Lj3g0025806 Lotus japonicus HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
MBI03_g20877_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
MD02G1115100 Malus domestica HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
MD15G1231100 Malus domestica HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Nitab4.5_0004345g0030 Nicotiana tabacum HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Nitab4.5_0004640g0010 Nicotiana tabacum HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
PSO210G2968 Papaver somniferum HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
PSO447G0024 Papaver somniferum HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Peaxi162Scf01053g00039 Petunia axillaris HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Potri.004G134000 Populus trichocarpa HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Potri.018G138000 Populus trichocarpa HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Potri.T046100 Populus trichocarpa HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Prupe.7G183100 Prunus persica HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Rhsim11G0118300 Rhododendron simsii HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
SHI05188 Sapria himalayana HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Solyc11g030600.3 Solanum lycopersicum HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Sopen11g013460 Solanum pennellii HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
PGSC0003DMG400030941 Solanum tuberosum HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
SGA_v2.0_scaffold122G33283 Striga asiatica HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
SGA_v2.0_scaffold8G04469 Striga asiatica HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
THA.LOC104820805 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Thecc.01G144800 Theobroma cacao HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
vmacro01683 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
GSVIVG01000262001 Vitis vinifera HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
GSVIVG01000263001 Vitis vinifera HOM05D000572 ORTHO05D002399 4.9e-12 73.2 36 88.9
Aa31LG11G8250 Aethionema arabicum HOM05D000572 ORTHO05D002399 6.5e-12 72.8 36 88.9
CARHR182500 Cardamine hirsuta HOM05D000572 ORTHO05D002399 6.5e-12 72.8 36 88.9
Dinv29626 Davidia involucrata HOM05D000572 ORTHO05D002399 8.4e-12 72.4 36 88.9
Dinv29674 Davidia involucrata HOM05D000572 ORTHO05D002399 8.4e-12 72.4 36 88.9
VMungo0464G1539 Vigna mungo HOM05D000572 ORTHO05D002399 8.4e-12 72.4 36 88.9
COL.COLO4_12145 Corchorus olitorius HOM05D000572 ORTHO05D002399 1.1e-11 72.0 36 88.9
Duzib160G0412 Durio zibethinus HOM05D000572 ORTHO05D002399 1.1e-11 72.0 36 86.1
Lj5A282T76 Lonicera japonica HOM05D000572 ORTHO05D002399 1.1e-11 72.0 36 86.1
Nn5g27348 Nelumbo nucifera HOM05D000572 ORTHO05D002399 1.1e-11 72.0 36 86.1
Atru.chr1.1803 Acer truncatum HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
Ah.04g152120 Amaranthus hybridus HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
AUR62021310 Chenopodium quinoa HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
AUR62043444 Chenopodium quinoa HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
ClCG11G000400 Citrullus lanatus HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
CsaV3_5G013990 Cucumis sativus L. HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
HanXRQChr04g0120041 Helianthus annuus HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
HanXRQChr11g0347301 Helianthus annuus HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
Lsat_1_v5_gn_7_75121 Lactuca sativa HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
Lalb_Chr03g0033391 Lupinus albus HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 88.9
Oeu032220.1 Olea europaea HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
Oeu046383.1 Olea europaea HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
PGR119G1310 Punica granatum HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
Sed0009647 Sechium edule HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
Hund15395 Selenicereus undatus HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
Sc02g0000170 Simmondsia chinensis HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
THA.LOC104823726 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
TWI63G0302 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 1.4e-11 71.6 36 86.1
CANSAT01G1917 Cannabis sativa HOM05D000572 ORTHO05D002399 1.9e-11 71.2 36 86.1
Cc07_g19880 Coffea canephora HOM05D000572 ORTHO05D002399 1.9e-11 71.2 36 86.1
Gohir.A05G373000 Gossypium hirsutum HOM05D000572 ORTHO05D002399 1.9e-11 71.2 36 86.1
Gohir.D04G042500 Gossypium hirsutum HOM05D000572 ORTHO05D002399 1.9e-11 71.2 36 86.1
Gorai.012G048000 Gossypium raimondii HOM05D000572 ORTHO05D002399 1.9e-11 71.2 36 86.1
ATR0584G123 Amborella trichopoda HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 83.3
Ca_03350_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
Ca_04146_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
Ca_28418_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
Haze_19377 Corylus avellana HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
FvH4_1g10300 Fragaria vesca HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
FAN19G1502 Fragaria x ananassa HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
FAN26G0750 Fragaria x ananassa HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
Medtr2g046020 Medicago truncatula HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
Medtr6g065580 Medicago truncatula HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
Os03g0798300 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
Os07g0182900 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
Psat1g114520 Pisum sativum HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
RcHm_v2.0_Chr2g0097141 Rosa chinensis HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
RcHm_v2.0_Chr5g0051581 Rosa chinensis HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
TPR.G12077 Trifolium pratense HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
Zm00001eb301620 Zea mays HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
Zm00001eb301630 Zea mays HOM05D000572 ORTHO05D002399 2.5e-11 70.9 36 86.1
Lj2A766T19 Lonicera japonica HOM05D000572 ORTHO05D002399 3.2e-11 70.5 36 83.3
QL10p035076 Quercus lobata HOM05D000572 ORTHO05D002399 3.2e-11 70.5 36 86.1
EL10Ac8g18295 Beta vulgaris HOM05D000572 ORTHO05D002399 4.2e-11 70.1 36 83.3
Prupe.7G060100 Prunus persica HOM05D000572 ORTHO05D002399 4.2e-11 70.1 36 86.1
SEGI_11646 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 4.2e-11 70.1 36 83.3
SEGI_36703 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 4.2e-11 70.1 36 83.3
GSVIVG01023152001 Vitis vinifera HOM05D000572 ORTHO05D002399 4.2e-11 70.1 36 83.3
Manes.13G119400 Manihot esculenta HOM05D000572 ORTHO05D002399 5.5e-11 69.7 36 83.3
Manes.13G155232 Manihot esculenta HOM05D000572 ORTHO05D002399 5.5e-11 69.7 36 83.3
GSVIVG01022824001 Vitis vinifera HOM05D000572 ORTHO05D002399 5.5e-11 69.7 36 86.1
ECA236G0624 Erigeron canadensis HOM05D000572 ORTHO05D002399 7.1e-11 69.3 36 83.3
TAR633G0967 Trochodendron aralioides HOM05D000572 ORTHO05D002399 7.1e-11 69.3 36 86.1
AT4G08990 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 9.3e-11 68.9 36 83.3
AT4G14140 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 9.3e-11 68.9 36 83.3
Carub.0004s0387 Capsella rubella HOM05D000572 ORTHO05D002399 9.3e-11 68.9 36 80.6
DCAR_003283 Daucus carota HOM05D000572 ORTHO05D002399 9.3e-11 68.9 36 80.6
AL7G42360 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 1.2e-10 68.6 36 83.3
AL7G42980 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 1.2e-10 68.6 36 83.3
AUR62028016 Chenopodium quinoa HOM05D000572 ORTHO05D002399 1.2e-10 68.6 36 80.6
SEGI_08948 Sequoiadendron giganteum HOM05D001165 ORTHO05D002399 1.2e-10 68.6 36 80.6
BcaB06g27851 Brassica carinata HOM05D000572 ORTHO05D002399 1.6e-10 68.2 36 80.6
CSS0016257 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.6e-10 68.2 36 80.6
CSS0042457 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.6e-10 68.2 36 80.6
HPP92_005786 Vanilla planifolia HOM05D000572 ORTHO05D002399 2.1e-10 67.8 36 80.6
BcaC02g08585 Brassica carinata HOM05D000572 ORTHO05D002399 3.5e-10 67.0 36 75.0
A04p17510 Brassica napus HOM05D000572 ORTHO05D002399 3.5e-10 67.0 36 75.0
C04p52290 Brassica napus HOM05D000572 ORTHO05D002399 3.5e-10 67.0 36 75.0
BolC4t26803H Brassica oleracea HOM05D000572 ORTHO05D002399 3.5e-10 67.0 36 75.0
BraA04t17374Z Brassica rapa HOM05D000572 ORTHO05D002399 3.5e-10 67.0 36 75.0
Mapoly0038s0027 Marchantia polymorpha HOM05D000572 ORTHO05D002399 3.5e-10 67.0 36 80.6
SMO358G0070 Selaginella moellendorffii HOM05D000572 ORTHO05D002399 6.0e-10 66.2 36 72.2
Aqoxy7G03575 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 1.0e-09 65.5 36 80.6
CDE01G0823 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 1.0e-09 65.5 36 80.6
Lj5g0006387 Lotus japonicus HOM05D000572 ORTHO05D002399 1.0e-09 65.5 36 83.3
Pp3c11_20540 Physcomitrium patens HOM05D000572 ORTHO05D002399 1.3e-09 65.1 36 75.0
Cc02_g23510 Coffea canephora HOM05D000572 ORTHO05D002399 1.8e-09 64.7 37 75.7
AagrBONN_evm.TU.Sc2ySwM_368.2421 Anthoceros agrestis HOM05D000572 ORTHO05D002399 2.3e-09 64.3 36 72.2
Ah.01g020670 Amaranthus hybridus HOM05D000572 ORTHO05D002399 3.0e-09 63.9 37 73.0
CSS0045013 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 3.0e-09 63.9 36 75.0
BcaNung05957 Brassica carinata HOM05D000572 ORTHO05D002399 5.1e-09 63.2 36 77.8
A06p38240 Brassica napus HOM05D000572 ORTHO05D002399 5.1e-09 63.2 36 77.8
C07p39990 Brassica napus HOM05D000572 ORTHO05D002399 5.1e-09 63.2 36 77.8
BolC7t44532H Brassica oleracea HOM05D000572 ORTHO05D002399 5.1e-09 63.2 36 77.8
BraA06t26739Z Brassica rapa HOM05D000572 ORTHO05D002399 5.1e-09 63.2 36 77.8
Carub.0007s2893 Capsella rubella HOM05D000572 ORTHO05D002399 5.1e-09 63.2 36 75.0
CARHR287790 Cardamine hirsuta HOM05D000572 ORTHO05D002399 5.1e-09 63.2 36 83.3
Atru.chr12.1878 Acer truncatum HOM05D000572 ORTHO05D002399 6.7e-09 62.8 36 77.8
Ca_01148_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 1.5e-08 61.6 32 84.4
Ca_03370_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 1.5e-08 61.6 32 84.4
BcaC06g30720 Brassica carinata HOM05D000572 ORTHO05D002399 1.9e-08 61.2 36 75.0
AT4G13610 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 2.5e-08 60.8 36 72.2
CARHR185450 Cardamine hirsuta HOM05D000572 ORTHO05D002399 2.5e-08 60.8 36 75.0
Thhalv10005683m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 7.4e-08 59.3 36 77.8
Sp2g19890 Schrenkiella parvula HOM05D000572 ORTHO05D002399 6.2e-07 56.2 36 66.7
CSS0020456 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.8e-06 54.7 36 69.4
Cre10.g461750 Chlamydomonas reinhardtii HOM05D000572 ORTHO05D002399 3.1e-06 53.9 37 56.8


User provided reference genes

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