Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 2.5e-217 758.4 372 100.0
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 7.0e-212 740.3 365 99.5
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.2e-211 739.6 372 97.3
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 2.5e-209 731.9 372 96.5
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 2.6e-198 695.3 370 91.9
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 4.6e-187 657.9 374 85.6
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.2e-179 633.3 372 86.6
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 5.8e-174 614.4 368 79.9
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 5.5e-172 607.8 371 76.8
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 1.0e-170 603.6 371 75.7
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 1.6e-168 596.3 397 73.8
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 6.2e-168 594.3 368 77.4
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 1.4e-167 593.2 370 77.0
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 2.4e-167 592.4 368 77.2
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 4.0e-167 591.7 366 77.3
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 4.0e-167 591.7 368 77.2
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 2.0e-166 589.3 372 76.3
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.0e-165 587.0 292 96.9
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 3.5e-163 578.6 375 74.1
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 3.3e-161 572.0 372 73.1
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 5.7e-161 571.2 372 73.1
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 3.7e-160 568.5 370 72.4
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 4.1e-159 565.1 372 74.5
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 4.5e-158 561.6 345 76.5
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 1.0e-157 560.5 375 71.2
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 1.0e-157 560.5 375 70.7
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 1.7e-157 559.7 371 72.2
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 3.8e-157 558.5 373 73.5
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 5.0e-157 558.1 378 72.0
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 1.1e-156 557.0 373 72.1
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 7.9e-155 550.8 365 73.7
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 7.9e-155 550.8 372 70.4
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 2.3e-154 549.3 372 70.7
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 4.3e-153 545.0 372 68.5
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 9.7e-153 543.9 370 71.4
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 2.2e-152 542.7 373 71.6
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 8.2e-152 540.8 372 68.5
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 5.3e-151 538.1 374 68.7
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 5.3e-151 538.1 294 86.4
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 5.3e-151 538.1 374 69.3
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 6.9e-151 537.7 375 69.9
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 9.0e-151 537.3 371 69.3
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 2.2e-149 532.7 367 70.6
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 5.0e-149 531.6 381 67.5
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 6.5e-149 531.2 365 70.7
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 1.9e-148 529.6 375 68.8
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 5.5e-148 528.1 375 67.7
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 7.9e-147 524.2 371 67.1
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 1.5e-145 520.0 413 63.7
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 2.6e-145 519.2 373 66.5
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 9.7e-145 517.3 352 70.7
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 3.4e-142 508.8 372 67.2
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 7.7e-142 507.7 373 66.2
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 1.0e-141 507.3 368 65.8
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 1.3e-141 506.9 367 68.7
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 1.7e-141 506.5 368 65.5
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 2.2e-141 506.1 373 65.1
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 8.5e-141 504.2 367 65.1
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 1.4e-140 503.4 370 65.9
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 1.9e-140 503.1 367 65.9
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 1.9e-140 503.1 367 65.9
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 7.2e-140 501.1 370 65.7
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 1.6e-139 500.0 371 66.6
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 3.6e-139 498.8 366 65.6
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 6.1e-139 498.0 367 65.1
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 7.9e-139 497.7 377 64.7
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 1.0e-138 497.3 369 63.4
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 3.0e-138 495.7 368 64.4
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 3.0e-138 495.7 371 64.7
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 1.5e-137 493.4 369 64.8
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 2.6e-137 492.7 366 65.3
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 4.8e-136 488.4 366 64.8
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 4.8e-136 488.4 392 65.3
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 1.1e-135 487.3 370 63.8
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 5.3e-135 485.0 409 60.4
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 7.0e-135 484.6 373 64.6
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 1.0e-133 480.7 379 62.5
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 3.8e-133 478.8 379 62.3
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 6.5e-133 478.0 370 64.9
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 2.5e-132 476.1 363 64.7
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 7.2e-132 474.6 369 62.1
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 1.2e-129 467.2 367 61.3
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 1.5e-129 466.8 401 60.1
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 1.3e-128 463.8 352 64.8
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 4.8e-128 461.8 371 63.9
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 1.1e-127 460.7 370 61.9
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 1.4e-127 460.3 371 60.6
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 7.0e-127 458.0 370 62.7
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 1.7e-125 453.4 404 57.4
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 2.2e-125 453.0 383 60.6
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 3.5e-118 429.1 372 59.7
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 4.5e-118 428.7 316 65.5
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 6.1e-115 418.3 401 55.1
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 5.0e-109 398.7 457 47.3
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 1.1e-108 397.5 344 56.1
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 1.1e-108 397.5 369 52.3
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 3.6e-107 392.5 367 58.3
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 3.7e-104 382.5 352 57.1
CANSAT56G4018 Cannabis sativa HOM05D006688 ORTHO05D008550 1.2e-97 360.9 218 75.2
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 8.6e-85 318.2 377 44.8
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 3.2e-79 299.7 185 76.8
Os09g0363600 Oryza sativa ssp. japonica HOM05D006688 ORTHO05D008550 3.8e-64 249.6 267 46.8
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 2.2e-56 223.8 174 66.1
Ciclev10009794m.g Citrus clementina HOM05D006688 ORTHO05D008550 3.5e-54 216.5 152 67.1
Cpa.g.sc28.142 Carica papaya HOM05D006688 ORTHO05D008550 7.4e-52 208.8 160 63.1
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 9.3e-47 191.8 127 74.8
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 6.0e-46 189.1 378 32.5
SEGI_08677 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 1.4e-29 134.8 131 52.7
Cre03.g180200 Chlamydomonas reinhardtii HOM05D006688 ORTHO05D008550 2.6e-28 130.6 427 27.4
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 1.7e-27 127.9 140 49.3
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 1.4e-26 124.8 86 66.3
arahy.Tifrunner.gnm1.ann1.B17F7K Arachis hypogaea HOM05D006688 ORTHO05D008550 2.4e-26 124.0 68 75.0
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 2.7e-22 110.5 64 82.8
Thhalv10023917m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 7.7e-17 92.4 115 44.3
SEGI_12408 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 3.8e-16 90.1 95 46.3
COL.COLO4_27080 Corchorus olitorius HOM05D006688 ORTHO05D008550 4.0e-13 80.1 68 63.2
BcaB07g31609 Brassica carinata HOM05D006688 ORTHO05D008550 1.0e-08 65.5 117 37.6
Hund20540 Selenicereus undatus HOM05D003261 ORTHO05D004230 3.2e-07 60.5 161 26.1
MSTRG.9273 Avicennia marina HOM05D003769 ORTHO05D004521 2.1e-06 57.8 126 28.6
CBR_g13009 Chara braunii HOM05D006688 ORTHO05D008550 3.6e-06 57.0 51 49.0
Ciclev10018557m.g Citrus clementina HOM05D003769 ORTHO05D004521 3.6e-06 57.0 140 26.4
C09p59210 Brassica napus HOM05D023048 ORTHO05D024144 8.0e-06 55.8 48 47.9
unitig_8.g3057 Utricularia gibba HOM05D003769 ORTHO05D004521 8.0e-06 55.8 126 29.4


User provided reference genes

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