Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2649 Fragaria x ananassa HOM05D005326 ORTHO05D006734 1.1e-76 290.0 157 100.0
FAN21G1851 Fragaria x ananassa HOM05D005326 ORTHO05D006734 1.5e-59 233.0 209 64.6
FAN11G3572 Fragaria x ananassa HOM05D005326 ORTHO05D006734 1.1e-54 216.9 191 66.0
FvH4_3g38440 Fragaria vesca HOM05D005326 ORTHO05D006734 1.5e-54 216.5 191 66.0
FAN25G3125 Fragaria x ananassa HOM05D005326 ORTHO05D006734 1.9e-54 216.1 190 65.8
RcHm_v2.0_Chr5g0069091 Rosa chinensis HOM05D005326 ORTHO05D006734 1.0e-42 177.2 190 56.8
FAN16G2933 Fragaria x ananassa HOM05D005326 ORTHO05D006734 2.2e-42 176.0 170 59.4
MD03G1072000 Malus domestica HOM05D005326 ORTHO05D006734 2.9e-26 122.5 203 41.9
vmacro14591 Vaccinium macrocarpon HOM05D005326 ORTHO05D006734 2.9e-26 122.5 226 40.3
Prupe.6G058600 Prunus persica HOM05D005326 ORTHO05D006734 5.0e-26 121.7 183 42.6
Eucgr.B02263 Eucalyptus grandis HOM05D005326 ORTHO05D006734 7.2e-25 117.9 198 40.9
MD11G1076000 Malus domestica HOM05D005326 ORTHO05D006734 1.6e-24 116.7 183 40.4
Ca_05594_v3 Cicer arietinum L. HOM05D005326 ORTHO05D006734 8.8e-23 110.9 198 41.9
Actinidia34453 Actinidia chinensis HOM05D005326 ORTHO05D006734 2.0e-22 109.8 191 40.8
Eucgr.L03188 Eucalyptus grandis HOM05D005326 ORTHO05D006734 7.5e-22 107.8 181 40.9
Hma1.2p1_0227F.1_g096450 Hydrangea macrophylla HOM05D005326 ORTHO05D006734 7.5e-22 107.8 198 41.9
Glyma.02G226100 Glycine max HOM05D005326 ORTHO05D006734 9.8e-22 107.5 184 40.8
PGR102G1694 Punica granatum HOM05D005326 ORTHO05D006734 9.8e-22 107.5 198 40.4
GSVIVG01024759001 Vitis vinifera HOM05D005326 ORTHO05D006734 2.2e-21 106.3 226 37.6
Glyma.14G192900 Glycine max HOM05D005326 ORTHO05D006734 2.8e-21 105.9 186 40.3
Lj2A1080T48 Lonicera japonica HOM05D005326 ORTHO05D006734 2.8e-21 105.9 211 38.9
Lalb_Chr04g0252261 Lupinus albus HOM05D005326 ORTHO05D006734 3.7e-21 105.5 180 42.8
Haze_24293 Corylus avellana HOM05D005326 ORTHO05D006734 1.1e-20 104.0 197 39.1
Sc21g0006290 Simmondsia chinensis HOM05D005326 ORTHO05D006734 1.1e-20 104.0 226 40.7
TWI79G0029 Tripterygium wilfordii HOM05D005326 ORTHO05D006734 1.1e-20 104.0 201 40.8
Dinv28633 Davidia involucrata HOM05D005326 ORTHO05D006734 1.4e-20 103.6 192 39.6
Cfa011686 Carpinus fangiana HOM05D005326 ORTHO05D006734 1.8e-20 103.2 197 38.6
Manes.02G120400 Manihot esculenta HOM05D005326 ORTHO05D006734 3.1e-20 102.4 187 41.7
arahy.Tifrunner.gnm1.ann1.0DMM9R Arachis hypogaea HOM05D005326 ORTHO05D006734 5.4e-20 101.7 174 40.8
Psat2g058880 Pisum sativum HOM05D005326 ORTHO05D006734 5.4e-20 101.7 206 40.8
Potri.009G044900 Populus trichocarpa HOM05D005326 ORTHO05D006734 5.4e-20 101.7 187 39.6
Phvul.008G261900 Phaseolus vulgaris HOM05D005326 ORTHO05D006734 7.0e-20 101.3 179 41.3
TPR.G17337 Trifolium pratense HOM05D005326 ORTHO05D006734 1.2e-19 100.5 141 45.4
CANSAT54G2601 Cannabis sativa HOM05D005326 ORTHO05D006734 1.6e-19 100.1 197 36.5
COL.COLO4_19142 Corchorus olitorius HOM05D005326 ORTHO05D006734 1.6e-19 100.1 193 39.9
Gohir.A05G089100 Gossypium hirsutum HOM05D005326 ORTHO05D006734 1.6e-19 100.1 196 40.3
TPR.G23707 Trifolium pratense HOM05D005326 ORTHO05D006734 2.0e-19 99.8 179 41.3
arahy.Tifrunner.gnm1.ann1.L63P0H Arachis hypogaea HOM05D005326 ORTHO05D006734 2.7e-19 99.4 174 40.2
Rhsim01G0236200 Rhododendron simsii HOM05D005326 ORTHO05D006734 2.7e-19 99.4 204 40.2
CSS0031446 Camellia sinensis var. sinensis HOM05D005326 ORTHO05D006734 5.9e-19 98.2 146 43.8
Thhalv10010556m.g Eutrema salsugineum HOM05D005326 ORTHO05D006734 5.9e-19 98.2 193 40.4
Sp5g14620 Schrenkiella parvula HOM05D005326 ORTHO05D006734 1.0e-18 97.4 193 38.9
Duzib168G0373 Durio zibethinus HOM05D005326 ORTHO05D006734 1.3e-18 97.1 192 38.5
MELO3C003237.2 Cucumis melo HOM05D005326 ORTHO05D006734 2.9e-18 95.9 195 40.5
CsaV3_4G026080 Cucumis sativus L. HOM05D005326 ORTHO05D006734 6.5e-18 94.7 195 38.5
Medtr5g070100 Medicago truncatula HOM05D005326 ORTHO05D006734 6.5e-18 94.7 197 39.6
Aa31LG4G16050 Aethionema arabicum HOM05D005326 ORTHO05D006734 1.1e-17 94.0 200 38.0
PSO339G2131 Papaver somniferum HOM05D005326 ORTHO05D006734 1.1e-17 94.0 210 34.8
Sabra09G0032400 Salix brachista HOM05D005326 ORTHO05D006734 1.5e-17 93.6 185 38.9
EL10Ac7g16152 Beta vulgaris HOM05D005326 ORTHO05D006734 2.5e-17 92.8 218 35.3
QL01p038020 Quercus lobata HOM05D005326 ORTHO05D006734 3.3e-17 92.4 190 40.0
ECA247G1506 Erigeron canadensis HOM05D005326 ORTHO05D006734 4.2e-17 92.0 202 35.1
MELO3C025859.2 Cucumis melo HOM05D005326 ORTHO05D006734 5.5e-17 91.7 196 38.8
MBI14_g28264_MAGBIO Magnolia biondii HOM05D005326 ORTHO05D006734 5.5e-17 91.7 195 37.9
PSO801G0040 Papaver somniferum HOM05D005326 ORTHO05D006734 7.2e-17 91.3 211 36.0
Thecc.09G302900 Theobroma cacao HOM05D005326 ORTHO05D006734 9.5e-17 90.9 185 36.8
CARHR155770 Cardamine hirsuta HOM05D005326 ORTHO05D006734 1.6e-16 90.1 212 37.7
ClCG02G019610 Citrullus lanatus HOM05D005326 ORTHO05D006734 1.6e-16 90.1 194 36.6
Hund18851 Selenicereus undatus HOM05D005326 ORTHO05D006734 1.6e-16 90.1 215 34.9
Gorai.009G092500 Gossypium raimondii HOM05D005326 ORTHO05D006734 2.1e-16 89.7 194 38.1
Migut.N00441 Erythranthe guttata HOM05D005326 ORTHO05D006734 2.8e-16 89.4 193 36.3
Nitab4.5_0002906g0020 Nicotiana tabacum HOM05D005326 ORTHO05D006734 2.8e-16 89.4 154 39.6
Gohir.D05G090100 Gossypium hirsutum HOM05D005326 ORTHO05D006734 3.6e-16 89.0 194 38.1
Lsat_1_v5_gn_9_19460 Lactuca sativa HOM05D005326 ORTHO05D006734 3.6e-16 89.0 176 37.5
Sed0006470 Sechium edule HOM05D005326 ORTHO05D006734 3.6e-16 89.0 201 36.8
Sopen03g038280 Solanum pennellii HOM05D005326 ORTHO05D006734 1.0e-15 87.4 174 40.2
THA.LOC104810721 Tarenaya hassleriana HOM05D005326 ORTHO05D006734 1.0e-15 87.4 218 37.2
Cc10_g11040 Coffea canephora HOM05D005326 ORTHO05D006734 1.4e-15 87.0 195 36.4
AL5G26380 Arabidopsis lyrata HOM05D005326 ORTHO05D006734 2.3e-15 86.3 217 35.0
arahy.Tifrunner.gnm1.ann1.2AHU2Q Arachis hypogaea HOM05D005326 ORTHO05D006734 2.3e-15 86.3 214 33.2
CiPaw.13G078700 Carya illinoinensis HOM05D005326 ORTHO05D006734 3.0e-15 85.9 197 36.5
Solyc03g119430.4 Solanum lycopersicum HOM05D005326 ORTHO05D006734 4.0e-15 85.5 181 39.2
Glyma.14G115100 Glycine max HOM05D005326 ORTHO05D006734 6.8e-15 84.7 44 93.2
Nn2g13685 Nelumbo nucifera HOM05D005326 ORTHO05D006734 6.8e-15 84.7 44 88.6
PSO832G2220 Papaver somniferum HOM05D005326 ORTHO05D006734 6.8e-15 84.7 129 41.9
CAN.G1425.2 Capsicum annuum HOM05D005326 ORTHO05D006734 8.9e-15 84.3 192 38.5
Oeu000445.1 Olea europaea HOM05D005326 ORTHO05D006734 8.9e-15 84.3 44 90.9
VMungo0647G1210 Vigna mungo HOM05D005326 ORTHO05D006734 8.9e-15 84.3 44 90.9
arahy.Tifrunner.gnm1.ann1.V0GB02 Arachis hypogaea HOM05D005326 ORTHO05D006734 1.2e-14 84.0 214 32.7
PGSC0003DMG400005636 Solanum tuberosum HOM05D005326 ORTHO05D006734 2.0e-14 83.2 176 38.1
AL8G35090 Arabidopsis lyrata HOM05D005326 ORTHO05D006734 2.6e-14 82.8 44 90.9
BcaC01g01847 Brassica carinata HOM05D005326 ORTHO05D006734 2.6e-14 82.8 51 78.4
SGA_v2.0_scaffold16G07793 Striga asiatica HOM05D005326 ORTHO05D006734 2.6e-14 82.8 44 84.1
SGA_v2.0_scaffold89G27368 Striga asiatica HOM05D005326 ORTHO05D006734 2.6e-14 82.8 123 40.7
unitig_699.g19203 Utricularia gibba HOM05D005326 ORTHO05D006734 7.5e-14 81.3 44 84.1
LjContig00155g0006083 Lotus japonicus HOM05D005326 ORTHO05D006734 1.3e-13 80.5 44 86.4
Aqoxy1G01640 Aquilegia oxysepala HOM05D005326 ORTHO05D006734 1.7e-13 80.1 44 86.4
Aqoxy2G00917 Aquilegia oxysepala HOM05D005326 ORTHO05D006734 1.7e-13 80.1 44 86.4
Oeu045044.1 Olea europaea HOM05D005326 ORTHO05D006734 1.7e-13 80.1 143 37.8
Carub.0005s1334 Capsella rubella HOM05D005326 ORTHO05D006734 2.2e-13 79.7 193 36.3
HanXRQChr08g0229511 Helianthus annuus HOM05D005326 ORTHO05D006734 2.2e-13 79.7 193 37.8
Zm00001eb063190 Zea mays HOM05D005326 ORTHO05D006734 2.2e-13 79.7 44 88.6
SMO164G0049 Selaginella moellendorffii HOM05D005326 ORTHO05D006734 2.8e-13 79.3 44 84.1
Cpa.g.sc112.33 Carica papaya HOM05D005326 ORTHO05D006734 4.9e-13 78.6 44 84.1
DCAR_007383 Daucus carota HOM05D005326 ORTHO05D006734 4.9e-13 78.6 185 35.7
AagrBONN_evm.TU.Sc2ySwM_344.2701 Anthoceros agrestis HOM05D005326 ORTHO05D006734 6.3e-13 78.2 44 84.1
AT3G47120 Arabidopsis thaliana HOM05D005326 ORTHO05D006734 6.3e-13 78.2 194 35.1
Glyma.08G231300 Glycine max HOM05D005567 ORTHO05D005651 6.3e-13 78.2 44 86.4
Mapoly0013s0140 Marchantia polymorpha HOM05D005326 ORTHO05D006734 1.1e-12 77.4 44 84.1
Pp3c19_15660 Physcomitrium patens HOM05D005326 ORTHO05D006734 1.1e-12 77.4 44 86.4
TAR369G0957 Trochodendron aralioides HOM05D005326 ORTHO05D006734 1.1e-12 77.4 44 79.5
Ah.08g221100 Amaranthus hybridus HOM05D005326 ORTHO05D006734 1.8e-12 76.6 223 31.4
AUR62001659 Chenopodium quinoa HOM05D005326 ORTHO05D006734 2.4e-12 76.3 198 35.9
Thhalv10011154m.g Eutrema salsugineum HOM05D005326 ORTHO05D006734 2.4e-12 76.3 44 84.1
PGSC0003DMG400035454 Solanum tuberosum HOM05D005326 ORTHO05D006734 4.1e-12 75.5 44 81.8
ATR0787G171 Amborella trichopoda HOM05D005326 ORTHO05D006734 7.0e-12 74.7 44 77.3
Os03g0826400 Oryza sativa ssp. japonica HOM05D005326 ORTHO05D006734 7.0e-12 74.7 193 33.7
BcaB01g00945 Brassica carinata HOM05D005326 ORTHO05D006734 9.2e-12 74.3 190 37.4
Actinidia23890 Actinidia chinensis HOM05D005326 ORTHO05D006734 1.2e-11 73.9 191 34.6
Ciclev10028940m.g Citrus clementina HOM05D005326 ORTHO05D006734 2.0e-11 73.2 190 34.7
THA.LOC104815287 Tarenaya hassleriana HOM05D005326 ORTHO05D006734 7.8e-11 71.2 44 75.0
BraA06t25116Z Brassica rapa HOM05D005326 ORTHO05D006734 1.0e-10 70.9 187 37.4
CDE02G0086 Ceratophyllum demersum HOM05D005326 ORTHO05D006734 1.0e-10 70.9 197 33.0
MCO15G555 Micromonas commoda HOM05D005326 ORTHO05D006734 1.0e-10 70.9 44 75.0
Cre06.g280550 Chlamydomonas reinhardtii HOM05D005326 ORTHO05D006734 1.3e-10 70.5 44 75.0
Migut.D02468 Erythranthe guttata HOM05D005326 ORTHO05D006734 1.7e-10 70.1 44 79.5
BcaB01g00943 Brassica carinata HOM05D005326 ORTHO05D006734 2.3e-10 69.7 190 35.8
BolC3t19423H Brassica oleracea HOM05D005326 ORTHO05D006734 2.3e-10 69.7 190 35.8
A06p20410 Brassica napus HOM05D005326 ORTHO05D006734 5.0e-10 68.6 167 38.3
HPP92_016949 Vanilla planifolia HOM05D005326 ORTHO05D006734 5.0e-10 68.6 172 32.0
C03p71400 Brassica napus HOM05D005326 ORTHO05D006734 1.1e-09 67.4 190 36.3
CBR_g921 Chara braunii HOM05D005326 ORTHO05D006734 1.9e-09 66.6 44 70.5
HPP92_016952 Vanilla planifolia HOM05D005326 ORTHO05D006734 5.6e-09 65.1 194 29.9
PRCOL_00001166 Prasinoderma coloniale HOM05D005326 ORTHO05D006734 9.5e-09 64.3 44 72.7
Peaxi162Scf00015g01035 Petunia axillaris HOM05D005326 ORTHO05D006734 8.0e-08 61.2 233 30.5
Eucgr.B02261 Eucalyptus grandis HOM05D005326 ORTHO05D006734 2.3e-07 59.7 97 40.2
CBR_g29333 Chara braunii HOM05D005326 ORTHO05D006734 1.2e-06 57.4 134 36.6
EL10Ac2g03601 Beta vulgaris HOM05D004911 ORTHO05D005930 4.4e-06 55.5 32 84.4


User provided reference genes

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