Gene: Solyc03g119430.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g119430.4
  • Transcript Identifier Solyc03g119430.4.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 62489997-62492780 : negative

Gene Family Information

  • ID HOM05D005326
  • #Genes/#Species 142/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g119430.4.1
  • uniprot A0A3Q7FUZ6
  • gene_id Solyc03g119430

Descriptions

  • Description Zinc finger transcription factor 30
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G47120
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G47120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005686
IBA
GOA DatabaseU2 snRNP
GO:0071011
IBA
GOA Databaseprecatalytic spliceosome
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT3G47120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000571 Zinc finger, CCCH-type
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR036855 Zinc finger, CCCH-type superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated