Gene: Carub.0005s1334

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0005s1334
  • Transcript Identifier Carub.0005s1334.1
  • Gene Type Coding gene
  • Location scaffold_5 : 7474245-7475468 : negative

Gene Family Information

  • ID HOM05D005326
  • #Genes/#Species 142/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0005s1334.v1.1
  • pacid 39226892
  • synonym Carubv10017621m.g

Descriptions

  • Description K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0046872
IEA
InterPrometal ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G47120
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G47120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT3G47120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR041367 E3 ligase, CCCH-type zinc finger
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000571 Zinc finger, CCCH-type
IPR036855 Zinc finger, CCCH-type superfamily
Mapman id Description
35.1 not assigned.annotated