Gene: HPP92_016949

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_016949
  • Transcript Identifier Vpl08Ag16949.1
  • Gene Type Coding gene
  • Location CM028157.1 : 23835307-23922698 : negative

Gene Family Information

  • ID HOM05D005326
  • #Genes/#Species 142/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl08Ag16949.1
  • pid KAG0470249.1

Descriptions

  • Description RNA binding protein *-*
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G47120
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G47120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT3G47120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR036955 AP2/ERF domain superfamily
IPR000504 RNA recognition motif domain
IPR000571 Zinc finger, CCCH-type
IPR016177 DNA-binding domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)