Gene: Pp3c19_15660

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c19_15660
  • Transcript Identifier Pp3c19_15660V3.1
  • Gene Type Coding gene
  • Location Chr19 : 10320056-10322497 : positive

Gene Family Information

  • ID HOM05D005326
  • #Genes/#Species 142/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c19_15660V3.1
  • pacid 32938676
  • alias Pp1s20_122V6
  • alias Phpat.019G052900
  • alias Phypa_204377
  • uniprot A0A2K1IYK7

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0000976
IEA
GOA Databasetranscription cis-regulatory region binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G47120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071011
IBA
GOA Databaseprecatalytic spliceosome
GO:0005686
IBA
GOA DatabaseU2 snRNP
GO:0016607
IEA
GOA Databasenuclear speck

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR036855 Zinc finger, CCCH-type superfamily
IPR000504 RNA recognition motif domain
IPR000571 Zinc finger, CCCH-type
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated