Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 3.9e-218 761.1 372 100.0
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.1e-212 743.0 372 97.0
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 7.0e-212 740.3 372 97.3
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.1e-207 726.5 364 97.3
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 3.6e-200 701.4 373 91.4
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 1.4e-188 662.9 377 85.4
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 8.1e-184 647.1 372 87.6
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 7.6e-174 614.0 374 78.1
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 9.3e-172 607.1 375 76.3
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 9.3e-172 607.1 372 76.3
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.0e-170 603.6 294 98.6
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 7.4e-169 597.4 397 73.8
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 1.1e-167 593.6 372 76.3
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 2.4e-167 592.4 370 76.8
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 3.1e-167 592.0 372 76.6
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 3.1e-167 592.0 374 75.4
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 1.2e-166 590.1 374 75.1
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 2.0e-166 589.3 374 75.1
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 3.5e-163 578.6 375 73.9
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 3.0e-162 575.5 373 72.7
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 3.7e-160 568.5 371 73.0
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 6.3e-160 567.8 371 73.0
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 6.9e-159 564.3 378 70.9
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 9.0e-159 563.9 376 70.5
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 5.9e-158 561.2 379 71.8
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 7.6e-158 560.8 372 73.9
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 1.0e-157 560.5 374 71.9
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 1.0e-157 560.5 345 75.9
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 2.2e-157 559.3 368 73.4
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 5.0e-157 558.1 372 71.5
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 8.5e-157 557.4 375 71.2
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 5.5e-156 554.7 373 70.8
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 1.2e-155 553.5 365 73.7
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 4.3e-153 545.0 375 71.5
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 3.7e-152 542.0 370 71.6
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 4.8e-152 541.6 371 69.0
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 6.3e-152 541.2 372 68.8
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 6.3e-152 541.2 297 86.2
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 8.2e-152 540.8 374 69.5
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 1.1e-151 540.4 374 68.7
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 1.2e-150 537.0 371 69.0
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 1.2e-150 537.0 365 71.2
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 7.7e-150 534.3 375 69.9
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 1.7e-149 533.1 382 67.0
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 5.5e-148 528.1 367 69.8
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 7.2e-148 527.7 414 64.3
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 1.2e-147 526.9 378 66.9
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 2.1e-147 526.2 375 68.8
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 2.3e-146 522.7 374 66.3
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 2.6e-145 519.2 373 66.5
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 5.7e-145 518.1 352 70.5
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 2.9e-141 505.8 373 65.7
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 3.8e-141 505.4 368 65.2
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 3.8e-141 505.4 367 68.7
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 1.1e-140 503.8 367 65.4
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 5.5e-140 501.5 375 64.5
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 7.2e-140 501.1 367 65.9
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 7.2e-140 501.1 367 65.9
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 7.2e-140 501.1 372 66.7
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 2.1e-139 499.6 369 64.0
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 4.7e-139 498.4 371 66.3
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 7.9e-139 497.7 370 65.1
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 1.0e-138 497.3 368 64.4
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 2.3e-138 496.1 367 65.1
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 3.9e-138 495.4 369 65.0
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 3.9e-138 495.4 368 64.7
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 3.9e-138 495.4 395 65.6
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 5.2e-138 495.0 370 64.9
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 8.8e-138 494.2 366 65.3
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 8.8e-138 494.2 371 64.2
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 2.0e-137 493.0 377 64.2
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 4.8e-136 488.4 366 65.0
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 1.8e-135 486.5 366 64.8
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 3.1e-135 485.7 370 63.5
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 1.6e-134 483.4 409 60.1
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 5.9e-134 481.5 373 64.1
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 7.7e-134 481.1 379 62.5
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 2.9e-133 479.2 380 61.8
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 8.5e-133 477.6 363 64.7
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 3.6e-131 472.2 372 64.2
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 2.3e-130 469.5 369 61.5
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 1.5e-129 466.8 367 61.6
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 1.3e-128 463.8 401 59.6
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 1.7e-128 463.4 352 64.5
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 1.1e-127 460.7 370 61.9
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 1.8e-127 459.9 372 63.2
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 7.0e-127 458.0 371 60.4
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 4.5e-126 455.3 370 62.2
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 1.7e-125 453.4 383 60.3
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 1.5e-124 450.3 404 56.7
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 9.1e-119 431.0 316 65.2
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 1.3e-117 427.2 372 59.7
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 4.7e-115 418.7 401 54.9
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 2.9e-109 399.4 457 47.5
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 1.6e-107 393.7 367 58.6
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 1.6e-107 393.7 368 52.4
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 6.1e-107 391.7 344 55.8
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 1.4e-103 380.6 356 56.2
CANSAT56G4018 Cannabis sativa HOM05D006688 ORTHO05D008550 6.2e-99 365.2 218 75.7
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 1.2e-83 314.3 377 43.8
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 3.9e-77 292.7 185 75.1
Os09g0363600 Oryza sativa ssp. japonica HOM05D006688 ORTHO05D008550 1.7e-64 250.8 267 46.8
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 7.6e-57 225.3 176 65.9
Ciclev10009794m.g Citrus clementina HOM05D006688 ORTHO05D008550 2.1e-54 217.2 152 67.8
Cpa.g.sc28.142 Carica papaya HOM05D006688 ORTHO05D008550 4.3e-52 209.5 160 63.1
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 5.5e-47 192.6 378 32.3
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 9.3e-47 191.8 127 74.0
SEGI_08677 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 3.9e-29 133.3 131 51.9
Cre03.g180200 Chlamydomonas reinhardtii HOM05D006688 ORTHO05D008550 1.7e-27 127.9 425 27.1
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 8.2e-27 125.6 140 48.6
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 1.8e-26 124.4 86 66.3
arahy.Tifrunner.gnm1.ann1.B17F7K Arachis hypogaea HOM05D006688 ORTHO05D008550 2.4e-26 124.0 68 75.0
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 3.6e-22 110.2 70 77.1
Thhalv10023917m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 2.0e-17 94.4 138 42.0
SEGI_12408 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 5.0e-16 89.7 95 45.3
COL.COLO4_27080 Corchorus olitorius HOM05D006688 ORTHO05D008550 1.0e-13 82.0 68 64.7
BcaB07g31609 Brassica carinata HOM05D006688 ORTHO05D008550 1.0e-08 65.5 119 37.8
Hund20540 Selenicereus undatus HOM05D003261 ORTHO05D004230 1.5e-07 61.6 161 25.5
CBR_g13009 Chara braunii HOM05D006688 ORTHO05D008550 3.6e-06 57.0 51 49.0
Ciclev10018557m.g Citrus clementina HOM05D003769 ORTHO05D004521 4.7e-06 56.6 115 30.4
MSTRG.9273 Avicennia marina HOM05D003769 ORTHO05D004521 8.0e-06 55.8 113 30.1
unitig_8.g3057 Utricularia gibba HOM05D003769 ORTHO05D004521 8.0e-06 55.8 117 30.8


User provided reference genes

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