Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2448 Fragaria x ananassa HOM05D000572 ORTHO05D002399 1.4e-128 463.0 235 100.0
FAN11G2057 Fragaria x ananassa HOM05D000572 ORTHO05D002399 1.3e-91 340.1 243 75.7
RcHm_v2.0_Chr5g0051581 Rosa chinensis HOM05D000572 ORTHO05D002399 1.4e-69 266.9 273 57.5
FAN26G0750 Fragaria x ananassa HOM05D000572 ORTHO05D002399 1.5e-55 220.3 277 48.7
FAN19G1502 Fragaria x ananassa HOM05D000572 ORTHO05D002399 7.7e-55 218.0 279 47.3
FvH4_1g10300 Fragaria vesca HOM05D000572 ORTHO05D002399 2.2e-54 216.5 276 47.5
RcHm_v2.0_Chr2g0097141 Rosa chinensis HOM05D000572 ORTHO05D002399 1.2e-47 194.1 249 47.8
MD15G1231100 Malus domestica HOM05D000572 ORTHO05D002399 6.5e-46 188.3 273 42.5
MD02G1115100 Malus domestica HOM05D000572 ORTHO05D002399 1.9e-45 186.8 268 42.5
Prupe.7G183100 Prunus persica HOM05D000572 ORTHO05D002399 2.7e-44 183.0 258 42.6
Lj2g0020412 Lotus japonicus HOM05D000572 ORTHO05D002399 1.4e-40 170.6 258 40.7
Lj3g0025806 Lotus japonicus HOM05D000572 ORTHO05D002399 1.6e-39 167.2 258 40.3
Duzib147G0313 Durio zibethinus HOM05D000572 ORTHO05D002399 3.5e-39 166.0 269 37.9
Haze_19377 Corylus avellana HOM05D000572 ORTHO05D002399 2.9e-38 162.9 266 37.2
Thecc.01G144800 Theobroma cacao HOM05D000572 ORTHO05D002399 3.8e-38 162.5 271 38.0
QL10p035076 Quercus lobata HOM05D000572 ORTHO05D002399 6.5e-38 161.8 276 39.1
Gohir.A05G373000 Gossypium hirsutum HOM05D000572 ORTHO05D002399 5.5e-37 158.7 277 37.5
Glyma.06G178200 Glycine max HOM05D000572 ORTHO05D002399 9.4e-37 157.9 258 38.0
Lalb_Chr01g0008651 Lupinus albus HOM05D000572 ORTHO05D002399 9.4e-37 157.9 271 39.5
Medtr2g046020 Medicago truncatula HOM05D000572 ORTHO05D002399 1.6e-36 157.1 271 37.6
Eucgr.I00036 Eucalyptus grandis HOM05D000572 ORTHO05D002399 2.7e-36 156.4 272 39.0
Medtr6g065580 Medicago truncatula HOM05D000572 ORTHO05D002399 3.6e-36 156.0 271 37.3
Ca_03350_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 4.7e-36 155.6 252 38.1
Glyma.04G187600 Glycine max HOM05D000572 ORTHO05D002399 6.1e-36 155.2 242 39.7
Gorai.012G048000 Gossypium raimondii HOM05D000572 ORTHO05D002399 6.1e-36 155.2 277 36.8
MSTRG.27892 Avicennia marina HOM05D000572 ORTHO05D002399 8.0e-36 154.8 273 37.0
CiPaw.12G053900 Carya illinoinensis HOM05D000572 ORTHO05D002399 1.4e-35 154.1 274 36.1
Gohir.D04G042500 Gossypium hirsutum HOM05D000572 ORTHO05D002399 1.4e-35 154.1 275 36.7
Sp4g01970 Schrenkiella parvula HOM05D000572 ORTHO05D002399 8.8e-35 151.4 265 35.5
CSS0016257 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.2e-34 151.0 258 37.2
CSS0042457 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 2.0e-34 150.2 258 37.2
TPR.G37134 Trifolium pratense HOM05D000572 ORTHO05D002399 2.0e-34 150.2 269 37.9
Lalb_Chr03g0033391 Lupinus albus HOM05D000572 ORTHO05D002399 2.6e-34 149.8 259 37.8
SGA_v2.0_scaffold8G04469 Striga asiatica HOM05D000572 ORTHO05D002399 3.4e-34 149.4 270 36.3
Peaxi162Scf01053g00039 Petunia axillaris HOM05D000572 ORTHO05D002399 4.4e-34 149.1 276 35.9
ClCG11G000400 Citrullus lanatus HOM05D000572 ORTHO05D002399 5.7e-34 148.7 258 36.0
CANSAT01G1917 Cannabis sativa HOM05D000572 ORTHO05D002399 7.5e-34 148.3 269 36.8
MELO3C026448.2 Cucumis melo HOM05D000572 ORTHO05D002399 7.5e-34 148.3 258 36.0
CsaV3_5G013990 Cucumis sativus L. HOM05D000572 ORTHO05D002399 7.5e-34 148.3 258 36.0
Dinv29674 Davidia involucrata HOM05D000572 ORTHO05D002399 9.8e-34 147.9 270 35.2
Dinv19128 Davidia involucrata HOM05D000572 ORTHO05D002399 1.3e-33 147.5 275 35.6
Cpa.g.sc37.192 Carica papaya HOM05D000572 ORTHO05D002399 2.2e-33 146.7 261 36.0
Phvul.004G133200 Phaseolus vulgaris HOM05D000572 ORTHO05D002399 2.2e-33 146.7 258 36.0
Lj5g0006387 Lotus japonicus HOM05D000572 ORTHO05D002399 2.8e-33 146.4 266 35.3
Carub.0008s0898 Capsella rubella HOM05D000572 ORTHO05D002399 4.8e-33 145.6 265 35.5
Potri.004G134000 Populus trichocarpa HOM05D000572 ORTHO05D002399 4.8e-33 145.6 273 36.6
VMungo0464G1362 Vigna mungo HOM05D000572 ORTHO05D002399 4.8e-33 145.6 258 37.6
VMungo0464G1539 Vigna mungo HOM05D000572 ORTHO05D002399 4.8e-33 145.6 257 36.6
Manes.13G119400 Manihot esculenta HOM05D000572 ORTHO05D002399 6.3e-33 145.2 275 34.9
SGA_v2.0_scaffold122G33283 Striga asiatica HOM05D000572 ORTHO05D002399 8.3e-33 144.8 259 37.1
Ciclev10027585m.g Citrus clementina HOM05D000572 ORTHO05D002399 1.1e-32 144.4 237 38.0
Manes.13G155232 Manihot esculenta HOM05D000572 ORTHO05D002399 1.1e-32 144.4 277 35.4
Atru.chr1.1803 Acer truncatum HOM05D000572 ORTHO05D002399 1.4e-32 144.1 267 35.6
PSO210G2968 Papaver somniferum HOM05D000572 ORTHO05D002399 1.8e-32 143.7 262 37.8
Rhsim11G0118300 Rhododendron simsii HOM05D000572 ORTHO05D002399 1.8e-32 143.7 279 35.8
Nn5g27348 Nelumbo nucifera HOM05D000572 ORTHO05D002399 2.4e-32 143.3 281 32.7
Nn5g27349 Nelumbo nucifera HOM05D000572 ORTHO05D002399 2.4e-32 143.3 281 32.7
TPR.G31040 Trifolium pratense HOM05D000572 ORTHO05D002399 2.4e-32 143.3 265 36.6
Sabra19G0000100 Salix brachista HOM05D000572 ORTHO05D002399 3.1e-32 142.9 273 37.4
AL8G22690 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 5.4e-32 142.1 282 33.3
Nitab4.5_0004345g0030 Nicotiana tabacum HOM05D000572 ORTHO05D002399 5.4e-32 142.1 275 34.5
Sabra04G0084200 Salix brachista HOM05D000572 ORTHO05D002399 5.4e-32 142.1 273 36.3
arahy.Tifrunner.gnm1.ann1.5512QZ Arachis hypogaea HOM05D000572 ORTHO05D002399 7.0e-32 141.7 234 36.8
CARHR182510 Cardamine hirsuta HOM05D000572 ORTHO05D002399 9.1e-32 141.4 262 34.0
Thhalv10003514m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 9.1e-32 141.4 261 36.0
TWI15G0599 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 9.1e-32 141.4 261 36.0
Potri.018G138000 Populus trichocarpa HOM05D000572 ORTHO05D002399 2.7e-31 139.8 273 36.3
THA.LOC104823726 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 4.5e-31 139.0 272 36.4
TWI63G0302 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 7.7e-31 138.3 257 36.2
PSO447G0024 Papaver somniferum HOM05D000572 ORTHO05D002399 1.0e-30 137.9 262 37.0
Aqoxy7G03575 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 1.3e-30 137.5 267 36.0
Sed0009647 Sechium edule HOM05D000572 ORTHO05D002399 1.7e-30 137.1 258 34.1
Solyc11g030600.3 Solanum lycopersicum HOM05D000572 ORTHO05D002399 1.7e-30 137.1 270 34.1
Migut.N00875 Erythranthe guttata HOM05D000572 ORTHO05D002399 2.2e-30 136.7 253 34.8
Nitab4.5_0004640g0010 Nicotiana tabacum HOM05D000572 ORTHO05D002399 2.9e-30 136.3 273 33.7
Potri.T046100 Populus trichocarpa HOM05D000572 ORTHO05D002399 2.9e-30 136.3 267 36.0
TAR628G1524 Trochodendron aralioides HOM05D000572 ORTHO05D002399 2.9e-30 136.3 271 33.9
Aa31LG11G8250 Aethionema arabicum HOM05D000572 ORTHO05D002399 3.8e-30 136.0 278 36.0
THA.LOC104820805 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 5.0e-30 135.6 273 34.8
CAN.G1330.38 Capsicum annuum HOM05D000572 ORTHO05D002399 6.5e-30 135.2 270 33.7
Lj2A766T19 Lonicera japonica HOM05D000572 ORTHO05D002399 6.5e-30 135.2 248 35.9
Atru.chr12.1878 Acer truncatum HOM05D000572 ORTHO05D002399 8.5e-30 134.8 258 34.5
DCAR_009626 Daucus carota HOM05D000572 ORTHO05D002399 8.5e-30 134.8 254 36.6
BraA04t17374Z Brassica rapa HOM05D000572 ORTHO05D002399 1.5e-29 134.0 284 33.5
Sc02g0000170 Simmondsia chinensis HOM05D000572 ORTHO05D002399 1.5e-29 134.0 242 35.5
AL7G42360 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 1.9e-29 133.7 245 35.9
DCAR_019941 Daucus carota HOM05D000572 ORTHO05D002399 1.9e-29 133.7 247 36.8
Hund15395 Selenicereus undatus HOM05D000572 ORTHO05D002399 1.9e-29 133.7 250 34.8
AT5G49160 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 2.5e-29 133.3 245 33.9
Oeu032220.1 Olea europaea HOM05D000572 ORTHO05D002399 2.5e-29 133.3 261 34.1
Sopen11g013460 Solanum pennellii HOM05D000572 ORTHO05D002399 2.5e-29 133.3 270 33.7
Psat3g159120 Pisum sativum HOM05D000572 ORTHO05D002399 3.2e-29 132.9 190 40.0
Thhalv10005683m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 4.2e-29 132.5 278 33.1
Aqoxy7G03579 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 7.2e-29 131.7 267 35.6
vmacro01683 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 7.2e-29 131.7 267 35.2
MBI03_g20877_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D002399 9.5e-29 131.3 260 35.0
Aqoxy1G02545 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 1.6e-28 130.6 258 35.7
AT4G14140 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 2.1e-28 130.2 261 34.1
Lj5A282T76 Lonicera japonica HOM05D000572 ORTHO05D002399 2.1e-28 130.2 277 34.3
Cc07_g19880 Coffea canephora HOM05D000572 ORTHO05D002399 2.7e-28 129.8 243 34.2
PGR119G1310 Punica granatum HOM05D000572 ORTHO05D002399 2.7e-28 129.8 242 34.7
AT4G08990 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 4.7e-28 129.0 261 33.7
A09p57170 Brassica napus HOM05D000572 ORTHO05D002399 4.7e-28 129.0 289 31.8
BraA09t41110Z Brassica rapa HOM05D000572 ORTHO05D002399 4.7e-28 129.0 289 31.8
EL10Ac8g18295 Beta vulgaris HOM05D000572 ORTHO05D002399 6.1e-28 128.6 245 34.3
BcaC07g41015 Brassica carinata HOM05D000572 ORTHO05D002399 6.1e-28 128.6 287 30.7
CDE12G0633 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 8.0e-28 128.3 262 31.3
HanXRQChr11g0347301 Helianthus annuus HOM05D000572 ORTHO05D002399 8.0e-28 128.3 275 33.8
BcaC02g08585 Brassica carinata HOM05D000572 ORTHO05D002399 1.0e-27 127.9 286 32.9
DCAR_003283 Daucus carota HOM05D000572 ORTHO05D002399 1.0e-27 127.9 257 34.6
C08p40170 Brassica napus HOM05D000572 ORTHO05D002399 1.4e-27 127.5 288 30.9
Ah.04g152120 Amaranthus hybridus HOM05D000572 ORTHO05D002399 1.8e-27 127.1 245 33.9
AL7G42980 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 1.8e-27 127.1 248 34.7
BcaB06g27851 Brassica carinata HOM05D000572 ORTHO05D002399 1.8e-27 127.1 281 33.5
BolC4t26803H Brassica oleracea HOM05D000572 ORTHO05D002399 1.8e-27 127.1 279 32.6
BolC8t51587H Brassica oleracea HOM05D000572 ORTHO05D002399 1.8e-27 127.1 288 30.9
Lsat_1_v5_gn_7_75121 Lactuca sativa HOM05D000572 ORTHO05D002399 2.3e-27 126.7 258 34.9
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 3.0e-27 126.3 272 32.4
Carub.0004s0387 Capsella rubella HOM05D000572 ORTHO05D002399 4.0e-27 125.9 258 34.5
AUR62043444 Chenopodium quinoa HOM05D000572 ORTHO05D002399 4.0e-27 125.9 261 32.2
C04p52290 Brassica napus HOM05D000572 ORTHO05D002399 6.8e-27 125.2 250 33.6
Ah.01g020670 Amaranthus hybridus HOM05D000572 ORTHO05D002399 1.2e-26 124.4 251 32.7
AUR62021310 Chenopodium quinoa HOM05D000572 ORTHO05D002399 1.2e-26 124.4 261 31.0
Ciclev10003166m.g Citrus clementina HOM05D000572 ORTHO05D002399 1.2e-26 124.4 214 35.0
HanXRQChr04g0120041 Helianthus annuus HOM05D000572 ORTHO05D002399 1.5e-26 124.0 267 34.1
Medtr3g026210 Medicago truncatula HOM05D000572 ORTHO05D002399 3.4e-26 122.9 164 43.9
Sp2g19890 Schrenkiella parvula HOM05D000572 ORTHO05D002399 4.4e-26 122.5 274 31.8
arahy.Tifrunner.gnm1.ann1.I0VWWF Arachis hypogaea HOM05D000572 ORTHO05D002399 5.7e-26 122.1 123 47.2
TPR.G12077 Trifolium pratense HOM05D000572 ORTHO05D002399 1.3e-25 120.9 193 38.3
CARHR070500 Cardamine hirsuta HOM05D000572 ORTHO05D002399 2.8e-25 119.8 242 33.9
ECA236G0624 Erigeron canadensis HOM05D000572 ORTHO05D002399 3.7e-25 119.4 271 32.5
SHI05188 Sapria himalayana HOM05D000572 ORTHO05D002399 1.1e-24 117.9 270 32.6
Os07g0182900 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 3.1e-24 116.3 256 31.6
CARHR185430 Cardamine hirsuta HOM05D000572 ORTHO05D002399 2.0e-23 113.6 279 31.5
CARHR287820 Cardamine hirsuta HOM05D000572 ORTHO05D002399 3.5e-23 112.8 264 30.3
Os03g0798300 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 3.5e-23 112.8 241 34.0
AUR62001561 Chenopodium quinoa HOM05D000572 ORTHO05D002399 2.3e-22 110.2 215 33.0
vmacro19834 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 2.3e-22 110.2 131 43.5
PGSC0003DMG400030941 Solanum tuberosum HOM05D000572 ORTHO05D002399 6.6e-22 108.6 206 34.0
Zm00001eb301620 Zea mays HOM05D000572 ORTHO05D002399 8.6e-22 108.2 178 36.5
Actinidia19532 Actinidia chinensis HOM05D000572 ORTHO05D002399 1.1e-21 107.8 140 42.9
Zm00001eb301630 Zea mays HOM05D000572 ORTHO05D002399 1.1e-21 107.8 154 38.3
SEGI_11646 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.9e-21 107.1 182 36.8
AUR62028017 Chenopodium quinoa HOM05D000572 ORTHO05D002399 3.3e-21 106.3 283 29.7
Cc02_g23510 Coffea canephora HOM05D000572 ORTHO05D002399 3.3e-21 106.3 135 42.2
Psat3g159080 Pisum sativum HOM05D000572 ORTHO05D002399 5.6e-21 105.5 116 42.2
HPP92_005786 Vanilla planifolia HOM05D000572 ORTHO05D002399 5.6e-21 105.5 160 36.2
SEGI_36703 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 3.6e-20 102.8 182 36.8
Thhalv10000011m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 2.3e-19 100.1 259 30.5
SEGI_20274 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 2.3e-19 100.1 182 36.3
CDE01G0045 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 5.2e-19 99.0 117 36.8
CAN.G868.5 Capsicum annuum HOM05D000572 ORTHO05D002399 8.9e-19 98.2 185 33.0
Carub.0007s2893 Capsella rubella HOM05D000572 ORTHO05D002399 2.6e-18 96.7 269 27.9
ATR0584G123 Amborella trichopoda HOM05D000572 ORTHO05D002399 3.7e-17 92.8 189 32.8
AagrBONN_evm.TU.Sc2ySwM_368.2421 Anthoceros agrestis HOM05D000572 ORTHO05D002399 3.7e-17 92.8 162 37.0
GSVIVG01000263001 Vitis vinifera HOM05D000572 ORTHO05D002399 3.7e-17 92.8 270 28.5
QL02p103162 Quercus lobata HOM05D000572 ORTHO05D002399 3.2e-16 89.7 165 34.5
HPP92_005801 Vanilla planifolia HOM05D000572 ORTHO05D002399 7.8e-15 85.1 132 35.6
COL.COLO4_12145 Corchorus olitorius HOM05D000572 ORTHO05D002399 8.6e-14 81.6 120 43.3
Mapoly0038s0027 Marchantia polymorpha HOM05D000572 ORTHO05D002399 8.6e-14 81.6 171 31.0
Oeu046383.1 Olea europaea HOM05D000572 ORTHO05D002399 2.1e-12 77.0 147 33.3
SMO358G0070 Selaginella moellendorffii HOM05D000572 ORTHO05D002399 3.6e-12 76.3 145 33.8
ATR0820G075 Amborella trichopoda HOM05D010077 ORTHO05D013698 5.2e-11 72.4 96 43.8
Psat0s3408g0040 Pisum sativum HOM05D000572 ORTHO05D002399 6.8e-11 72.0 197 31.0
ATR0820G152 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.5e-10 70.9 137 35.8
VMungo0464G0463 Vigna mungo HOM05D000572 ORTHO05D002399 2.6e-10 70.1 115 37.4
ATR0820G047 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.3e-09 67.8 96 37.5
GSVIVG01000262001 Vitis vinifera HOM05D000572 ORTHO05D002399 2.9e-09 66.6 267 27.0
ATR0820G089 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.4e-08 64.3 180 28.9
ATR0820G235 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.9e-08 63.9 96 37.5
ATR0820G285 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.2e-08 63.2 115 35.7
Oeu063107.2 Olea europaea HOM05D000572 ORTHO05D002399 5.4e-08 62.4 127 34.6
Psat4g163840 Pisum sativum HOM05D000572 ORTHO05D002399 5.4e-08 62.4 148 31.1
ATR0439G001 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.0e-07 60.5 179 26.8
ATR0820G299 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.0e-07 60.5 120 35.8
ATR0820G252 Amborella trichopoda HOM05D010077 ORTHO05D013698 7.8e-07 58.5 83 39.8
AT4G13610 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.3e-06 57.8 255 22.4
Psat2g046640 Pisum sativum HOM05D000572 ORTHO05D002399 3.9e-06 56.2 148 29.1
ATR0820G099 Amborella trichopoda HOM05D010077 ORTHO05D013698 5.0e-06 55.8 144 29.2
Ciclev10003543m.g Citrus clementina HOM05D000572 ORTHO05D002399 5.0e-06 55.8 119 26.9


User provided reference genes

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