Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 5.0e-132 474.6 256 100.0
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.1e-131 473.4 256 99.6
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.5e-128 462.2 256 98.0
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 7.4e-128 460.7 256 97.7
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 8.8e-121 437.2 256 91.4
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 2.7e-98 362.5 256 79.7
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 7.0e-94 347.8 256 77.3
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 4.4e-88 328.6 253 71.5
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 3.7e-87 325.5 253 73.5
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 6.3e-87 324.7 254 72.4
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 2.4e-86 322.8 253 73.1
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 5.4e-86 321.6 254 70.9
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 3.5e-85 318.9 254 70.5
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 8.6e-84 314.3 253 69.6
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 8.0e-82 307.8 263 67.7
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 3.0e-81 305.8 252 67.9
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 3.4e-80 302.4 254 68.9
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 6.4e-79 298.1 256 64.1
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 3.2e-78 295.8 253 68.4
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 5.4e-78 295.0 259 62.2
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 7.0e-78 294.7 262 65.6
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 4.6e-77 292.0 252 69.8
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.7e-76 290.0 252 65.5
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 6.6e-76 288.1 253 66.8
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 1.1e-75 287.3 252 63.9
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 1.9e-75 286.6 259 66.4
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 1.2e-74 283.9 252 65.5
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 1.2e-74 283.9 252 65.5
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 3.6e-74 282.3 260 67.3
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 3.6e-74 282.3 260 63.1
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 3.6e-74 282.3 255 65.9
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 6.2e-74 281.6 260 66.5
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 6.2e-74 281.6 296 58.8
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 8.0e-74 281.2 262 63.0
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 2.3e-73 279.6 252 64.3
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 3.1e-73 279.3 262 62.2
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 5.2e-73 278.5 262 62.6
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 8.9e-73 277.7 254 65.4
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 1.5e-72 276.9 253 65.6
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.5e-72 276.9 255 65.5
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 4.4e-72 275.4 253 65.2
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 7.5e-72 274.6 262 62.2
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.3e-71 273.9 253 65.2
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 1.3e-71 273.9 263 61.2
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 3.7e-71 272.3 293 53.9
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 4.9e-71 271.9 252 63.5
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.1e-70 270.8 155 97.4
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 9.2e-70 267.7 289 52.9
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 6.0e-69 265.0 253 63.2
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 1.0e-68 264.2 252 63.5
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 3.0e-68 262.7 265 61.9
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 5.1e-68 261.9 262 59.5
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 6.6e-68 261.5 249 63.9
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 1.1e-67 260.8 265 59.6
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 1.5e-67 260.4 252 65.1
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 2.5e-67 259.6 259 63.3
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 4.3e-67 258.8 267 59.6
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 1.2e-66 257.3 252 62.3
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 4.7e-66 255.4 254 60.6
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 6.2e-66 255.0 253 60.9
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 1.8e-65 253.4 263 60.5
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 4.0e-65 252.3 254 61.4
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 4.0e-65 252.3 261 60.2
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 1.2e-64 250.8 252 61.5
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 2.0e-64 250.0 273 56.4
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 2.6e-64 249.6 263 58.6
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 1.7e-63 246.9 262 56.1
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 1.7e-63 246.9 262 54.2
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 1.4e-62 243.8 256 59.0
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 4.1e-62 242.3 262 53.4
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 9.2e-62 241.1 253 58.9
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 9.2e-62 241.1 252 60.7
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 4.6e-61 238.8 254 59.1
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.5e-59 233.0 252 58.3
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 2.5e-59 233.0 252 57.1
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 2.1e-58 229.9 254 58.3
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 2.1e-58 229.9 264 56.8
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 2.8e-58 229.6 208 66.8
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 2.8e-58 229.6 253 54.9
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 3.6e-58 229.2 262 56.1
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 1.1e-57 227.6 255 56.9
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 8.9e-57 224.6 252 56.3
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 4.4e-56 222.2 292 51.7
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 9.9e-56 221.1 253 56.1
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 1.3e-55 220.7 249 54.2
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 2.9e-55 219.5 264 55.3
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 3.5e-53 212.6 253 56.1
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 6.6e-52 208.4 254 52.0
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 4.3e-51 205.7 266 53.0
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 4.3e-51 205.7 255 52.9
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 3.6e-50 202.6 257 47.5
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 5.3e-49 198.7 252 50.8
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 3.9e-44 182.6 253 46.6
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 4.0e-41 172.6 245 44.9
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 2.2e-39 166.8 255 49.0
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 1.4e-38 164.1 302 43.4
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 3.9e-36 156.0 209 54.1
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 6.7e-36 155.2 111 70.3
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.1e-33 146.4 189 48.7
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 2.6e-32 143.3 101 71.3
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 5.8e-32 142.1 287 39.7
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.7e-31 140.6 189 48.1
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 6.4e-31 138.7 216 50.0
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 1.3e-28 131.0 283 38.2
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 1.8e-28 130.6 292 40.1
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 3.7e-26 122.9 151 57.0
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 8.2e-26 121.7 154 53.9
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 6.9e-25 118.6 337 35.0
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 7.6e-24 115.2 70 80.0
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 1.4e-22 110.9 70 75.7
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 6.7e-20 102.1 204 44.6
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.3e-19 99.4 179 39.7
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.4e-17 94.4 255 33.3
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.1e-17 93.2 189 38.1
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.4e-16 89.7 150 41.3
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.4e-16 89.7 150 41.3
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 2.7e-13 80.1 120 45.8
MD10G1090400 Malus domestica HOM05D006779 ORTHO05D008491 3.0e-12 76.6 89 55.1
Ah.08g219340 Amaranthus hybridus HOM05D006779 ORTHO05D008491 7.7e-08 62.0 95 44.2
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 5.0e-07 59.3 61 59.0


User provided reference genes

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