Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 0.0e+00 2033.1 1024 100.0
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 0.0e+00 2031.5 1024 99.9
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 0.0e+00 1986.5 1025 97.8
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 0.0e+00 1979.5 1024 97.1
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 0.0e+00 1882.1 1030 92.4
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 0.0e+00 1825.4 947 97.5
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 0.0e+00 1538.5 1042 77.2
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 0.0e+00 1503.4 958 81.0
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 0.0e+00 1321.2 1043 67.9
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 0.0e+00 1292.3 1013 68.0
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 0.0e+00 1282.7 1015 67.3
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 0.0e+00 1224.5 1064 63.9
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 0.0e+00 1208.0 1031 63.8
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 0.0e+00 1206.4 1004 65.7
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 0.0e+00 1190.6 1055 63.1
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 0.0e+00 1187.2 983 64.6
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 0.0e+00 1171.0 1041 61.7
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 0.0e+00 1170.2 1001 63.9
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 0.0e+00 1165.6 1023 62.9
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 0.0e+00 1165.2 989 64.6
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 0.0e+00 1164.8 1012 62.3
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 0.0e+00 1161.7 1012 62.1
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 0.0e+00 1161.7 1000 63.7
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 0.0e+00 1158.3 1031 62.7
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 0.0e+00 1156.4 1004 62.5
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 0.0e+00 1155.6 989 64.4
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 0.0e+00 1150.2 1042 61.8
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 0.0e+00 1143.6 1018 62.1
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 0.0e+00 1139.0 1005 61.9
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 0.0e+00 1133.6 1003 62.7
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 0.0e+00 1129.4 993 62.4
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 0.0e+00 1129.0 1024 60.6
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 0.0e+00 1120.9 1008 60.4
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 0.0e+00 1104.0 1062 60.5
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 0.0e+00 1094.7 1020 60.5
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 0.0e+00 1090.9 997 59.0
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 0.0e+00 1079.7 924 63.7
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 6.9e-310 1067.4 1039 58.7
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 7.6e-309 1063.9 1030 58.9
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 7.9e-306 1053.9 1067 56.8
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 5.1e-305 1051.2 953 62.9
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 5.7e-304 1047.7 1005 58.4
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 1.7e-303 1046.2 1007 58.0
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 1.1e-302 1043.5 1008 56.9
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 1.4e-302 1043.1 973 60.4
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 5.3e-302 1041.2 1004 58.1
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 9.1e-302 1040.4 1016 57.8
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 1.2e-301 1040.0 1016 57.8
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 1.2e-301 1040.0 985 57.5
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 2.6e-301 1038.9 1051 55.9
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 4.5e-301 1038.1 1016 57.7
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 1.4e-299 1033.1 1024 57.3
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 1.2e-298 1030.0 1014 55.9
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 1.6e-298 1029.6 1026 57.6
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 2.1e-298 1029.2 1025 57.3
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 2.7e-298 1028.9 1015 57.5
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 5.7e-296 1021.1 928 62.4
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 1.3e-295 1020.0 1035 56.7
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 1.3e-295 1020.0 823 67.6
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 1.5e-293 1013.1 932 61.9
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 1.4e-291 1006.5 977 59.6
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 3.6e-290 1001.9 866 65.4
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 1.7e-287 993.0 1046 54.0
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 1.0e-276 957.2 1011 56.4
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 2.3e-268 929.5 992 53.5
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 2.7e-261 906.0 972 54.6
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 2.7e-261 906.0 946 56.8
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 6.6e-260 901.4 1043 50.9
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 1.6e-258 896.7 697 69.3
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.4e-257 893.6 923 56.8
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 3.1e-257 892.5 779 64.2
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 4.0e-257 892.1 757 65.7
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 3.4e-256 889.0 950 54.6
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 1.7e-255 886.7 822 61.8
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 4.1e-254 882.1 947 54.9
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 1.6e-253 880.2 735 66.5
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 2.5e-251 872.8 986 52.6
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 1.7e-247 860.1 894 55.8
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 1.9e-246 856.7 991 52.2
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 4.1e-246 855.5 939 54.6
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 3.5e-245 852.4 854 59.1
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 6.0e-245 851.7 683 65.9
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 1.7e-244 850.1 944 53.2
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 5.6e-243 845.1 806 58.6
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 9.5e-243 844.3 747 62.8
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 3.6e-242 842.4 896 55.2
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 9.9e-240 834.3 825 56.5
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 2.3e-236 823.2 597 72.5
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 2.5e-235 819.7 983 51.3
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 1.6e-234 817.0 942 52.3
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 1.3e-231 807.4 734 61.7
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 6.6e-228 795.0 674 63.8
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.4e-225 787.3 995 48.4
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 2.1e-221 773.5 718 58.6
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 8.7e-220 768.1 1058 46.6
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 1.5e-211 740.7 965 48.3
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 2.9e-207 726.5 1024 46.9
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 2.7e-205 719.9 680 60.6
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 8.2e-202 708.4 817 50.6
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 2.4e-193 680.2 721 55.5
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 4.7e-181 639.4 1045 42.8
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 1.7e-170 604.4 922 41.5
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 1.7e-162 577.8 625 54.6
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 4.0e-156 556.6 951 38.7
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 1.1e-153 548.5 565 56.3
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 4.2e-150 536.6 1137 36.8
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 4.4e-147 526.6 723 42.9
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 1.9e-129 468.0 555 48.6
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 4.6e-104 383.6 426 54.0
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 9.1e-68 263.1 208 64.9
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 2.2e-61 241.9 184 67.4
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 3.6e-56 224.6 678 31.1
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 2.5e-49 201.8 347 33.1
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 1.6e-40 172.6 328 34.1
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 5.4e-36 157.5 560 28.6
FAN09G2267 Fragaria x ananassa HOM05D006371 ORTHO05D008309 6.1e-32 144.1 73 91.8
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 4.3e-25 121.3 88 72.7
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 3.1e-23 115.2 123 51.2
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 4.1e-20 104.8 74 71.6
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-15 89.7 130 42.3
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.0e-14 85.9 70 65.7
CSS0035540 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 9.8e-14 83.6 104 46.2
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 4.1e-12 78.2 264 25.0
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 5.4e-12 77.8 41 97.6
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.6e-08 66.2 38 86.8
CDE03G0216 Ceratophyllum demersum HOM05D003809 ORTHO05D003935 2.3e-07 62.4 159 27.0
vmacro08854 Vaccinium macrocarpon HOM05D003809 ORTHO05D003935 4.0e-07 61.6 148 26.4
Glyma.03G061852 Glycine max HOM05D003809 ORTHO05D003935 5.2e-07 61.2 168 25.0
Glyma.03G062300 Glycine max HOM05D003809 ORTHO05D003935 5.2e-07 61.2 168 25.0
Glyma.03G062500 Glycine max HOM05D003809 ORTHO05D003935 6.8e-07 60.8 120 33.3
Glyma.03G062800 Glycine max HOM05D003809 ORTHO05D003935 6.8e-07 60.8 150 26.0
Hund04870 Selenicereus undatus HOM05D003809 ORTHO05D003935 6.8e-07 60.8 102 35.3
Glyma.01G115000 Glycine max HOM05D003809 ORTHO05D003935 8.9e-07 60.5 146 25.3
Glyma.03G063000 Glycine max HOM05D003809 ORTHO05D003935 8.9e-07 60.5 263 24.7
Sc07g0006540 Simmondsia chinensis HOM05D003809 ORTHO05D003935 8.9e-07 60.5 258 23.3
Duzib128G0737 Durio zibethinus HOM05D003809 ORTHO05D003935 1.2e-06 60.1 132 26.5
Glyma.03G061700 Glycine max HOM05D003809 ORTHO05D003935 1.2e-06 60.1 108 34.3
Gorai.007G379100 Gossypium raimondii HOM05D003809 ORTHO05D003935 1.5e-06 59.7 254 20.9
Lj3g0017704 Lotus japonicus HOM05D003809 ORTHO05D003935 1.5e-06 59.7 120 27.5
Gohir.D11G348800 Gossypium hirsutum HOM05D003809 ORTHO05D003935 2.0e-06 59.3 80 28.8
Duzib106G1511 Durio zibethinus HOM05D003809 ORTHO05D003935 2.6e-06 58.9 132 26.5
Glyma.U024600 Glycine max HOM05D003809 ORTHO05D003935 2.6e-06 58.9 138 25.4
Glyma.03G061802 Glycine max HOM05D003809 ORTHO05D003935 3.4e-06 58.5 125 25.6
Glyma.03G062100 Glycine max HOM05D003809 ORTHO05D003935 3.4e-06 58.5 125 25.6
Sc06g0006210 Simmondsia chinensis HOM05D003809 ORTHO05D003935 3.4e-06 58.5 92 29.3
Cpa.g.sc112.34 Carica papaya HOM05D003809 ORTHO05D003935 4.4e-06 58.2 181 21.5
Gohir.A09G164500 Gossypium hirsutum HOM05D003809 ORTHO05D003935 7.6e-06 57.4 95 25.3
TPR.G13325 Trifolium pratense HOM05D003809 ORTHO05D003935 7.6e-06 57.4 108 25.9
Peaxi162Scf00141g00342 Petunia axillaris HOM05D003809 ORTHO05D003935 9.9e-06 57.0 209 24.9


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