Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 6.1e-112 407.5 209 100.0
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 6.5e-106 387.5 206 96.6
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 2.7e-104 382.1 204 95.1
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 4.1e-92 341.7 209 87.1
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 8.9e-79 297.4 170 91.2
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 5.9e-75 284.6 203 75.4
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 5.6e-73 278.1 201 70.1
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 4.6e-59 231.9 190 65.8
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 2.5e-57 226.1 195 66.2
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 2.1e-56 223.0 200 61.5
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 4.7e-56 221.9 184 62.5
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 6.2e-56 221.5 170 66.5
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 6.2e-56 221.5 194 59.3
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 6.8e-55 218.0 194 59.3
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 8.9e-55 217.6 195 61.0
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 1.5e-54 216.9 200 58.0
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 2.0e-54 216.5 202 59.4
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 2.6e-54 216.1 202 57.4
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.6e-54 216.1 202 60.9
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 5.8e-54 214.9 194 58.8
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 7.5e-54 214.5 194 58.2
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 1.3e-53 213.8 204 57.4
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 4.9e-53 211.8 200 56.5
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 4.9e-53 211.8 201 58.7
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 2.4e-52 209.5 199 59.3
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 3.2e-52 209.1 203 58.1
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 4.1e-52 208.8 185 62.2
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 9.2e-52 207.6 202 57.4
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 9.2e-52 207.6 201 56.7
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 1.6e-51 206.8 198 58.6
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.6e-51 206.8 197 56.3
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 4.6e-51 205.3 186 57.0
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 6.0e-51 204.9 203 54.7
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 7.8e-51 204.5 201 53.2
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 1.3e-50 203.8 185 61.6
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 2.3e-50 203.0 201 53.2
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 3.0e-50 202.6 200 57.0
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 3.0e-50 202.6 200 57.0
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 3.0e-50 202.6 193 60.6
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 7.3e-49 198.0 202 60.4
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 4.7e-48 195.3 202 58.4
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 6.2e-48 194.9 196 56.6
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 8.1e-48 194.5 193 55.4
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 1.1e-47 194.1 169 60.4
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 3.1e-47 192.6 187 54.0
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 4.0e-47 192.2 192 55.2
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 4.0e-47 192.2 189 56.6
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 4.0e-47 192.2 202 54.5
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 8.9e-47 191.0 207 53.6
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 2.0e-46 189.9 203 55.2
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.0e-46 189.9 194 55.2
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 3.4e-46 189.1 202 53.5
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 5.8e-46 188.3 211 52.1
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 5.8e-46 188.3 192 53.1
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 5.8e-46 188.3 195 54.9
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 5.8e-46 188.3 193 53.9
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 7.6e-46 188.0 190 55.3
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 1.3e-45 187.2 202 53.5
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 3.8e-45 185.7 195 56.4
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 6.4e-45 184.9 204 51.5
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 1.1e-44 184.1 197 54.3
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 1.4e-44 183.7 205 48.8
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 5.4e-44 181.8 198 54.0
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 1.6e-43 180.3 165 57.0
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 2.7e-43 179.5 214 48.1
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 7.8e-43 177.9 199 53.8
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 2.3e-42 176.4 200 51.5
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 6.6e-42 174.9 215 45.6
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 8.7e-42 174.5 198 53.0
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 8.7e-42 174.5 167 58.1
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 8.7e-42 174.5 197 52.3
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 8.7e-42 174.5 181 55.8
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 1.1e-41 174.1 198 52.5
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 1.1e-41 174.1 206 47.1
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 1.5e-41 173.7 197 49.7
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.5e-41 173.7 202 50.5
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 3.3e-41 172.6 194 53.1
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 3.3e-41 172.6 198 53.0
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 5.6e-41 171.8 198 52.5
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 5.6e-41 171.8 198 52.5
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 6.2e-40 168.3 212 48.1
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 1.8e-39 166.8 195 47.7
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 6.9e-39 164.9 171 56.7
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 2.0e-38 163.3 171 52.0
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 4.4e-38 162.2 198 51.0
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 9.3e-36 154.5 151 57.0
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 1.6e-35 153.7 188 47.9
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 1.3e-34 150.6 189 46.0
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.7e-34 150.2 245 40.0
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 5.1e-34 148.7 195 44.6
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 5.1e-34 148.7 253 40.3
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 8.7e-34 147.9 221 44.8
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 1.1e-33 147.5 200 44.5
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 6.2e-32 141.7 167 44.3
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 3.1e-31 139.4 143 54.5
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 5.3e-31 138.7 181 44.2
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 5.8e-30 135.2 199 41.7
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 2.5e-25 119.8 142 50.0
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 1.4e-20 104.0 83 62.7
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 2.5e-20 103.2 193 37.8
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 5.7e-17 92.0 167 34.1
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 4.0e-15 85.9 152 32.9
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.3e-10 70.1 128 32.0
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 2.0e-06 57.0 46 60.9


User provided reference genes

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