Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L03570 Eucalyptus grandis HOM05D006093 ORTHO05D007652 4.3e-62 241.1 120 100.0
Eucgr.F03905 Eucalyptus grandis HOM05D006093 ORTHO05D007652 2.9e-58 228.4 116 96.6
Hma1.2p1_0017F.1_g011320 Hydrangea macrophylla HOM05D006093 ORTHO05D007652 2.2e-53 212.2 114 86.0
Migut.I00747 Erythranthe guttata HOM05D006093 ORTHO05D007652 1.8e-52 209.1 114 86.0
Rhsim12G0190000 Rhododendron simsii HOM05D006093 ORTHO05D007652 3.1e-52 208.4 114 83.3
GSVIVG01017379001 Vitis vinifera HOM05D006093 ORTHO05D007652 1.5e-51 206.1 114 84.2
CSS0022367 Camellia sinensis var. sinensis HOM05D006093 ORTHO05D007652 3.4e-51 204.9 114 82.5
CiPaw.01G249800 Carya illinoinensis HOM05D006093 ORTHO05D007652 1.0e-50 203.4 114 80.7
RcHm_v2.0_Chr2g0134861 Rosa chinensis HOM05D006093 ORTHO05D007652 1.0e-50 203.4 114 83.3
DCAR_025523 Daucus carota HOM05D006093 ORTHO05D007652 1.3e-50 203.0 114 82.5
Carub.0001s4146 Capsella rubella HOM05D006093 ORTHO05D007652 2.2e-50 202.2 114 78.1
FvH4_6g29401 Fragaria vesca HOM05D006093 ORTHO05D007652 2.2e-50 202.2 114 81.6
FAN14G2225 Fragaria x ananassa HOM05D006093 ORTHO05D007652 2.2e-50 202.2 114 81.6
Nn8g39568 Nelumbo nucifera HOM05D006093 ORTHO05D007652 2.2e-50 202.2 114 81.6
Potri.003G031100 Populus trichocarpa HOM05D006093 ORTHO05D007652 2.2e-50 202.2 114 80.7
GSVIVG01026354001 Vitis vinifera HOM05D006093 ORTHO05D007652 2.2e-50 202.2 113 84.1
CARHR042600 Cardamine hirsuta HOM05D006093 ORTHO05D007652 2.9e-50 201.8 114 78.9
Manes.04G110800 Manihot esculenta HOM05D006093 ORTHO05D007652 2.9e-50 201.8 114 79.8
Nitab4.5_0010806g0010 Nicotiana tabacum HOM05D006093 ORTHO05D007652 2.9e-50 201.8 114 79.8
vmacro16879 Vaccinium macrocarpon HOM05D006093 ORTHO05D007652 3.8e-50 201.4 114 81.6
MSTRG.11153 Avicennia marina HOM05D006093 ORTHO05D007652 5.0e-50 201.1 114 83.3
Thhalv10011553m.g Eutrema salsugineum HOM05D006093 ORTHO05D007652 5.0e-50 201.1 114 78.1
FAN09G4542 Fragaria x ananassa HOM05D006093 ORTHO05D007652 6.5e-50 200.7 114 80.7
Manes.11G058700 Manihot esculenta HOM05D006093 ORTHO05D007652 6.5e-50 200.7 114 79.8
Nitab4.5_0003072g0060 Nicotiana tabacum HOM05D006093 ORTHO05D007652 6.5e-50 200.7 114 80.7
arahy.Tifrunner.gnm1.ann1.5T1ZSX Arachis hypogaea HOM05D006093 ORTHO05D007652 8.5e-50 200.3 114 81.6
arahy.Tifrunner.gnm1.ann1.RDN84X Arachis hypogaea HOM05D006093 ORTHO05D007652 8.5e-50 200.3 114 81.6
TWI12G0620 Tripterygium wilfordii HOM05D006093 ORTHO05D007652 8.5e-50 200.3 114 78.1
Lsat_1_v5_gn_1_34180 Lactuca sativa HOM05D006093 ORTHO05D007652 1.1e-49 199.9 114 79.8
MD17G1215000 Malus domestica HOM05D006093 ORTHO05D007652 1.1e-49 199.9 114 81.6
Prupe.3G090700 Prunus persica HOM05D006093 ORTHO05D007652 1.1e-49 199.9 114 78.9
PGSC0003DMG400014146 Solanum tuberosum HOM05D006093 ORTHO05D007652 1.9e-49 199.1 114 78.9
Aa31LG10G2500 Aethionema arabicum HOM05D006093 ORTHO05D007652 2.5e-49 198.7 114 77.2
BcaC08g43998 Brassica carinata HOM05D006093 ORTHO05D007652 2.5e-49 198.7 114 77.2
A05p18970 Brassica napus HOM05D006093 ORTHO05D007652 3.2e-49 198.4 114 78.1
BraA05t20794Z Brassica rapa HOM05D006093 ORTHO05D007652 3.2e-49 198.4 114 78.1
SGA_v2.0_scaffold5G02719 Striga asiatica HOM05D006093 ORTHO05D007652 3.2e-49 198.4 125 78.4
PGR102G2220 Punica granatum HOM05D006093 ORTHO05D007652 4.2e-49 198.0 114 81.6
Sp1g39050 Schrenkiella parvula HOM05D006093 ORTHO05D007652 4.2e-49 198.0 114 77.2
ATR0800G026 Amborella trichopoda HOM05D006093 ORTHO05D007652 5.5e-49 197.6 114 80.7
BcaB02g10988 Brassica carinata HOM05D006093 ORTHO05D007652 5.5e-49 197.6 114 76.3
Lj3g0003829 Lotus japonicus HOM05D006093 ORTHO05D007652 5.5e-49 197.6 114 80.7
MBI15_g24195_MAGBIO Magnolia biondii HOM05D006093 ORTHO05D007652 5.5e-49 197.6 116 81.0
Solyc03g117510.4 Solanum lycopersicum HOM05D006093 ORTHO05D007652 5.5e-49 197.6 114 78.9
TAR626G1009 Trochodendron aralioides HOM05D006093 ORTHO05D007652 5.5e-49 197.6 114 78.9
BolC6t36581H Brassica oleracea HOM05D006093 ORTHO05D007652 7.2e-49 197.2 114 76.3
AT1G52500 Arabidopsis thaliana HOM05D006093 ORTHO05D007652 9.4e-49 196.8 114 75.4
PSO170G6797 Papaver somniferum HOM05D006093 ORTHO05D007652 9.4e-49 196.8 116 79.3
TPR.G37262 Trifolium pratense HOM05D006093 ORTHO05D007652 1.2e-48 196.4 114 78.9
AL1G60740 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 1.6e-48 196.1 114 76.3
Haze_16582 Corylus avellana HOM05D006093 ORTHO05D007652 2.1e-48 195.7 114 78.1
SalBow2G3638 Salvia bowleyana HOM05D006093 ORTHO05D007652 2.1e-48 195.7 114 79.8
Sopen03g036410 Solanum pennellii HOM05D006093 ORTHO05D007652 2.1e-48 195.7 114 78.9
Gohir.D10G082500 Gossypium hirsutum HOM05D006093 ORTHO05D007652 2.7e-48 195.3 114 78.1
Gorai.011G089400 Gossypium raimondii HOM05D006093 ORTHO05D007652 2.7e-48 195.3 114 78.1
HanXRQChr02g0033451 Helianthus annuus HOM05D006093 ORTHO05D007652 2.7e-48 195.3 114 78.9
QL05p032033 Quercus lobata HOM05D006093 ORTHO05D007652 3.6e-48 194.9 114 77.2
THA.LOC104818014 Tarenaya hassleriana HOM05D006093 ORTHO05D007652 4.6e-48 194.5 114 73.7
CAN.G407.11 Capsicum annuum HOM05D006093 ORTHO05D007652 7.9e-48 193.7 114 77.2
Sabra03G0017500 Salix brachista HOM05D006093 ORTHO05D007652 7.9e-48 193.7 121 76.0
Cc04_g04560 Coffea canephora HOM05D006093 ORTHO05D007652 1.0e-47 193.4 114 76.3
Atru.chr1.2881 Acer truncatum HOM05D006093 ORTHO05D007652 1.4e-47 193.0 114 77.2
CANSAT56G0666 Cannabis sativa HOM05D006093 ORTHO05D007652 1.4e-47 193.0 114 77.2
Phvul.005G179300 Phaseolus vulgaris HOM05D006093 ORTHO05D007652 1.4e-47 193.0 114 78.9
unitig_62.g23594 Utricularia gibba HOM05D006093 ORTHO05D007652 1.4e-47 193.0 114 79.8
Cpa.g.sc167.9 Carica papaya HOM05D006093 ORTHO05D007652 1.8e-47 192.6 114 76.3
CDE05G1298 Ceratophyllum demersum HOM05D006093 ORTHO05D007652 1.8e-47 192.6 115 77.4
Glyma.13G366800 Glycine max HOM05D006093 ORTHO05D007652 3.0e-47 191.8 114 78.9
Lalb_Chr24g0395421 Lupinus albus HOM05D006093 ORTHO05D007652 3.0e-47 191.8 114 77.2
Medtr2g104100 Medicago truncatula HOM05D006093 ORTHO05D007652 3.0e-47 191.8 114 78.9
Ca_01048_v3 Cicer arietinum L. HOM05D006093 ORTHO05D007652 3.9e-47 191.4 114 77.2
MELO3C017842.2 Cucumis melo HOM05D006093 ORTHO05D007652 3.9e-47 191.4 117 73.5
Lj5A75T43 Lonicera japonica HOM05D006093 ORTHO05D007652 3.9e-47 191.4 139 66.2
Thecc.06G031100 Theobroma cacao HOM05D006093 ORTHO05D007652 5.1e-47 191.0 114 74.6
Ciclev10025737m.g Citrus clementina HOM05D006093 ORTHO05D007652 6.7e-47 190.7 114 72.8
HPP92_003851 Vanilla planifolia HOM05D006093 ORTHO05D007652 6.7e-47 190.7 114 73.7
VMungo1080G1109 Vigna mungo HOM05D006093 ORTHO05D007652 6.7e-47 190.7 114 78.1
Hund00502 Selenicereus undatus HOM05D006093 ORTHO05D007652 8.8e-47 190.3 114 74.6
AUR62016319 Chenopodium quinoa HOM05D006093 ORTHO05D007652 2.0e-46 189.1 114 76.3
COL.COLO4_11898 Corchorus olitorius HOM05D006093 ORTHO05D007652 2.0e-46 189.1 114 73.7
CsaV3_4G001910 Cucumis sativus L. HOM05D006093 ORTHO05D007652 3.3e-46 188.3 114 74.6
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 3.3e-46 188.3 114 76.3
ClCG07G012240 Citrullus lanatus HOM05D006093 ORTHO05D007652 5.7e-46 187.6 114 73.7
Sed0013008 Sechium edule HOM05D006093 ORTHO05D007652 7.4e-46 187.2 114 73.7
Duzib235G0399 Durio zibethinus HOM05D006093 ORTHO05D007652 1.3e-45 186.4 114 74.6
EL10Ac9g21886 Beta vulgaris HOM05D006093 ORTHO05D007652 1.7e-45 186.0 114 75.4
Peaxi162Scf00553g00627 Petunia axillaris HOM05D006093 ORTHO05D007652 1.7e-45 186.0 114 75.4
AUR62011503 Chenopodium quinoa HOM05D006093 ORTHO05D007652 2.2e-45 185.7 114 73.7
Psat5g303120 Pisum sativum HOM05D006093 ORTHO05D007652 6.3e-45 184.1 117 74.4
FAN05G1370 Fragaria x ananassa HOM05D006093 ORTHO05D007652 5.3e-44 181.0 107 76.6
Ah.01g020480 Amaranthus hybridus HOM05D006093 ORTHO05D007652 7.7e-43 177.2 131 66.4
Os06g0643600 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 1.1e-41 173.3 116 69.8
Os08g0304900 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 1.9e-41 172.6 112 70.5
ECA247G0880 Erigeron canadensis HOM05D006093 ORTHO05D007652 3.2e-41 171.8 114 70.2
Gohir.A10G068900 Gossypium hirsutum HOM05D006093 ORTHO05D007652 5.5e-41 171.0 114 71.1
Zm00001eb275260 Zea mays HOM05D006093 ORTHO05D007652 6.7e-39 164.1 115 67.0
HanXRQChr02g0033461 Helianthus annuus HOM05D006093 ORTHO05D007652 1.5e-38 162.9 115 67.0
HanXRQChr02g0033471 Helianthus annuus HOM05D006093 ORTHO05D007652 1.3e-37 159.8 116 66.4
SEGI_24777 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 4.1e-36 154.8 103 68.9
SMO367G0330 Selaginella moellendorffii HOM05D006093 ORTHO05D007652 7.0e-36 154.1 112 70.5
SHI11225 Sapria himalayana HOM05D006093 ORTHO05D007652 1.9e-33 146.0 117 59.8
Dinv01702 Davidia involucrata HOM05D006093 ORTHO05D007652 3.2e-33 145.2 91 70.3
Pp3c23_21520 Physcomitrium patens HOM05D006093 ORTHO05D007652 3.6e-32 141.7 114 59.6
Dinv21460 Davidia involucrata HOM05D006093 ORTHO05D007652 1.8e-31 139.4 77 80.5
Actinidia08958 Actinidia chinensis HOM05D006093 ORTHO05D007652 2.3e-31 139.0 77 81.8
Mapoly0015s0062 Marchantia polymorpha HOM05D006093 ORTHO05D007652 1.5e-30 136.3 114 57.0
Pp3c8_24280 Physcomitrium patens HOM05D006093 ORTHO05D007652 1.5e-30 136.3 113 58.4
Dinv30625 Davidia involucrata HOM05D006093 ORTHO05D007652 2.8e-29 132.1 75 80.0
Oeu058023.3 Olea europaea HOM05D006093 ORTHO05D005440 3.7e-29 131.7 101 64.4
Psat6g066000 Pisum sativum HOM05D006093 ORTHO05D007652 1.5e-25 119.8 65 84.6
Pp3c24_20180 Physcomitrium patens HOM05D006093 ORTHO05D007652 1.6e-24 116.3 115 49.6
Cre10.g428433 Chlamydomonas reinhardtii HOM05D006093 ORTHO05D007652 4.7e-24 114.8 119 49.6
MCO15G481 Micromonas commoda HOM05D006093 ORTHO05D007652 4.2e-17 91.7 117 42.7
Cfa001945 Carpinus fangiana HOM05D006093 ORTHO05D007652 5.2e-15 84.7 51 74.5
Sabra14G0094900 Salix brachista HOM05D006093 ORTHO05D007652 5.2e-15 84.7 54 68.5
Actinidia08791 Actinidia chinensis HOM05D006093 ORTHO05D007652 2.7e-11 72.4 37 86.5
CBR_g884 Chara braunii HOM05D006093 ORTHO05D007652 1.3e-10 70.1 58 46.6
Sc10g0008130 Simmondsia chinensis HOM05D006093 ORTHO05D007652 8.6e-10 67.4 37 83.8
Medtr3g118550 Medicago truncatula HOM05D006093 ORTHO05D007652 3.6e-08 62.0 73 46.6
AL7G45760 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 6.1e-08 61.2 37 73.0
Cfa026683 Carpinus fangiana HOM05D006093 ORTHO05D007652 2.3e-07 59.3 108 32.4


User provided reference genes

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